Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                --------->AHL20(1)                              <---------AHL20(1)                              <---------ICU4                              --------->ARR11(3)                           --------->AHL20(2)                        --------->YAB1                   <---------YAB1                                     --------->TOE2(3)         -----                 <--------HAHB4                                      --------->ATHB12      --------->ANAC55(2)          --------->ZAT14  --------->YAB1                  <---------AHL20(2)          --------->AHL20(2) -------->DOF2   <---------ICU4               <---------AHL20(2)<-----------GT1    --------->ICU4 -------->AGL15  --------->YAB1  <---------AHL20(2)        --------->AHL20(2)      <---------YAB1 ---------AGL15 <---------YAB1<---------ARR11(3)          --------->AHL20(2)   <---------AHL20(2)   taaaagttgaactatactattattactaataatattttcttagtctattttaaaatttcatttattttacttcattagttttatattgattatatgtaac  10797600                                    --------->YAB1                          ------->TEIL       <---------YAB1                    --------->TOE2(3)                    <---------AHL20(2)       <---------TOE1(3)                 --------->TOE1(3)                   <---------AHL20(2)<---------AHL20(2)                       ----------------->AGL1            --------->CCA1(2)       <---------AHL20(2)                      <---------GLK1(1)           --------->ARR11(3)       --------->AHL20(2)                     <---------ARR14(2)     ---           <---------ARR11(3)   <---------YAB1   --------->AHL20(2)        --------->ARR14(2)     <--       ---------->DOF2    <---------YAB1  --------->AHL20(2)          <---------ANAC46           ----  --------->YAB1   --------->AHL20(2)--------->AHL20(2)---------->DOF2<---------bZIP60(2)        <--- ---->ZAT6 --------->ARR11(1) ----------->GT1<---------TOE2(3)   <---------At4g35610<xxxxxxxxxxxxxxxxsmallRNA(i)   acaaatataaaaagatatgaattaaatgaacattgtaattaaaatttaagattaaacaaaagtgttttgctgatgtggataccttagatggagagactct  10797700        --------->CCA1(2)           <---------AHL20(2)       --------->ARR11(3)           --------->AHL20(2)  -------->HAHB4                   --------->AHL20(2)  --------->YAB1                   --------->AHL20(1)           <------MYB46(1)  --------->AHL20(2)               <---------AHL20(2)        <------------CBF <---------YAB1  ------->TEIL      <---------AHL20(1)       --------->ATHB12 ------------>AGL15           ------------>CBF             <---------YAB1 -------------AGL15          <-----------GT1        --------->ARR14(2)    --------->YAB1     -------- ------------->AGL3      <---------AHL20(2) --------->ARR11(3)  <------MYB83      --------->AHL20(2) --------------AGL3 <---------AHL20(2)      <---------ARR11(3)<---------WOX13(1)  <---------AHL20(2)   ctaattatagatatagatgtatttcattttttttcaatttatttgagttcttcaaatctacatgattggtttgctatcagcaaattaaaaaccactaata  10797800                                                                                              -------                                                                                           <---------                                                                                     <---------GLK1(2)                                                --------->ATHB12>>>>>>>>>RAP2.2      <---------ARR14(2)  <------MYB46(1)                            --------->ANAC46 <---------ARR11(3)     --------->ARR14(2)  <------MYB83                     ---------->DOF2           <---------CCA1(2)  <-----------GT1 ->YAB1    <---------YAB1      --------->WOX13(1)<------------CBF    --------->TOE2(3) <-------TEIL--   agcttggtttgctatttttgttcaaagatgagtccatcaaagtctctaagtcattgattccatatatctaaacttagttttgttacagattcactttcac  10797900                                        <---------YAB1                                      <---------ICU4                                      --------->YAB1                                   <---------ICU4                                   --------->YAB1                                  --------->ICU4      --------->MYB52(1)        <---------ICU4                                ---------->ID1 <---------AHL20(2)    <---------HSFC1(2)                                    <-------GAMYB --------->AHL20(2)    <---------HSFB2a(1)                                  --------->MYB52(2) ----------->TBP       --------->HSFB2a(1) <---------MYB52(2)               <-----------RAV1(1) -->ZAT6    <------ZmHOX2a(2)   --------->YAB1-------->P                    <---------MYB46(3) -DOF2<-----------GT1  --------->HSFC1(2)--------->ZAT6  ----------->GT1    --------->MYB55(2) --------->TBP       ---------->DOF2 <---------YAB1    ---------->DOF2    <---------MYB52(1)       <-   tatataaataacggatcaagaaggaaagttcccataatcatcatcactaaccatgagaaaagtttatttgttcttcgtttgttgcattgttgcaactagt  10798000                                                                           <---------LBD16                                                                       --------->REM1(1)                                                                   <---------ANAC46                                         ==================HOX2a_HOX2a--------->SPL7                                         ------>ZmHOX2a(1)        --------------->AtSPL3                                <---------ANAC46           --------->CCA1(2)             <---------ZAT6     <---------MYB46(3)  <------ZmHOX2a(2) <-------TEIL --------->ZAT6       <-------MYC3   --------->ARR14(2)   <---------ARR11(3)            <---------MYB52(1) ----------GT1        ------->MYC3   <---------ARR14(2)   --------->ARR11(3)        <---------ZAT18   ttaactctcaatgtagttttagcacatgagacggtcgtgaatcctccaaacacgatcaaagatatagagccgtacatctcggatagagcccttgggtttg  10798100                                                                  <----------DOF2                                                                 ------>ZmHOX2a(2)                                                                <------ZmHOX2a(2)                                                                <---------RVE1(1)                                                               --------->ARR14(2)                                                  <---------HSFB2a(2)                                                  --------->HSFB2a(2)                                         <------ZmHOX2a(2)     --------->ARR11(3)                                         <---------YAB1        <---------ARR14(3)             <------                                        --------->ARR11(3)     --------->ARR14(3)             ------>NtERF2                                  --------->At4g35610  --------->At4g35610                   --------                                  <---------At4g35610 --------->GLK1(2)                   --------->ANAC58                      ------>ZmHOX2a(1) <---------ARR11(3)     <---------ARR11(3)         --------->ANAC58                      ==========================HOX2a_HOX2a---------->DOF2                --------->ANAC46                     --------------->AGL15     <----------DOF2 <---------ARR14(2)      <---------MYB52(1)                    ----------------->AGL1 --------->KAN4(2)  --------->RVE1(1)       <-----------HVH21   tgttgaagttggagaacaattgtcctataagagaacagctaagatcattctttgagaagctaaaagatcttttgaagttggagtcttctgttacgccgct  10798200                   <---------ARR11(3)                   --------->ARR11(3)               ---------->DOF2              --------->TOE1(2)          ------->GAMYB                                                               <------ZmHOX2a(1)         <---------MYB52(2)                      --------->LBD16                     <---------ZAT14         --------->MYB46(3)                  --------->ARR14(2)                      --------->ZAT18      <---------WRKY12                       <---------ARR14(2)                    <---------At4g35610    =====================================HOX2a_HOX2a  --------->RVE1(1)            --------->At4g35610    <------ZmHOX2a(1)             ------>ZmHOX2a(2)  <---------ARR11(3)     <---------ANAC58      --- ---At4g35610--------->MYB46(3) <---------ARR11(3)   --------->ARR11(3)     <---------ANAC58<--------P ->RAP2.6(2)------->TEIL        --------->ARR11(3)   --------->GLK1(2)    <---------YAB1  -----------   aatcgaggacaacgaaccaaagacattcaagtttgatcttaagtccaaatccgaaaatctcttgcaaacgatgtttatgcttgggagaggactggtaagt  10798300                                                            --------->AHL20(1)         >>>>>>>ZML2                                                          <---------AHL20(1)        --------->ARR11(3)                                                          --------->ARR11(3)    ---------->DOF2           <---------AHL20(1)                             <---------ARR11(3)   --------->YAB1           --------->AHL20(1)                  --------->ZAT6              --------->MYB46(3)           --------->ARR11(3)             --------->TOE2(3) <---------AHL20(1)<---------ATHB12           <---------ARR11(3)             --------->TOE1(3) --------->ARR11(3)<<<<<<<<<ARR2 ------>ARR11(3)  ---------->DOF2       <---------TOE1(3) --------->AHL20(1)--------->WOX13(1) >GT1     --------->YAB1    ------->TEIL<---------TOE2(3)--------->YAB1   <---------KAN4(2)      <---   tatcttgaacaaaaatatttcaaagctatgaacataaattctaacgtaaacactaccaaaaatattttgcatttggaacaatcaaagttctagtctcatt  10798400                           <---------TOE1(3)                           <---------TOE2(3)                    ----------->GT1                  --------->ARR11(3)                  <---------ARR11(3)<---------ANAC58              --------->YAB1 --------->TOE1(3)             <---------ATHB12--------->TOE2(3)  --------->HSFB2a(2)              --------->YAB1      --------->AtLEC2    <-----------GT1       <---------HSFB2a(2)     ----------->GT1     ------>ZmHOX2a(1) --------->YAB1      ------->TEIL            <---------AHL20(2) ------AHL20(2) <---------YAB1      <---------ANAC58     <---------ATHB12       <---------YAB1   ----   ttatgtccttgcacaatgaagatagttataacgttatagcttatgaacttatggaactaatcaatgtttttattttgtgaatatgatagttgagttcaag  10798500  Previous    Next  AGI:  At3g28770.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G28810.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G28820.1); similar to PREDICTED: similar to QUAhog (hedgehog related) family member (qua-1) [Rattus norvegicus] (GB:XP_001069720.1); contains InterPro domain Protein of unknown function DUF1216 (InterPro:IPR009605) Range:  from: 10797953    to: 10804474    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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