Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             --------->TOE2(3)     --------->GLK1(2)    <---------GLK1(2)                                     ----------->GT1       --------->AHL20(2)  ----------->ARR10                 <---------WOX13(1)    --------->TOE2(3)     <---------AHL20(2) <---------TOE1(2)               <---------AHL20(2)     <---------At5g28300  --------->TOE2(3)  ----- ------->TOE1(2)                 --------->AHL20(2)     -------->P         <-------TEIL        <----- ------>YAB1                   <----------DOF2 --------->AtLEC2    --------->WOX13(1)          ------ ---AHL20(2)     <-----------------AGL1   xxxxxxxxxxxxxxxx>smallRNA(i)<-----------RAV1(2)--------->GLK1(2)   tcgtaagattctatcttagacctcttatggactctttaattgatacttcttgcaaacttaccgtaatatcactcaggtacattaaaatgagaagctagat  10778700                                                                                                    <                                                                                                 <---                                                                                                 <---                                                                                              <xxxxxx                                                                                             <xxxxxxx                                                                                             <xxxxxxx                                                                    --------->YAB1        ---------->DOF2                                   <---------ANAC58              <---------GLK1(1)        <xxxxxxxxxx                                   <---------ANAC46  <---------CCA1(1)                   xxxxxxxxxxxx                                   <---------ANAC58  <---------RVE1(1)                  <xxxxxxxxxxxx                            --------->ANAC58        --------->ARR11(3)         <------ZmHOX2a(2)-----                            --------->ANAC58        <---------ARR11(3)        <---------ARR11(3)<----        ---------->DOF2   ---------->DOF2           --------->AHL20(1)        --------->ARR11(3)xxxxx    --------->CCA1(2)    --------->AtMYB61          <---------AHL20(1)   <----------DOF2--------->YAB1 ---->CCA1(2)        <---------ETT(2)<-------GAMYB----------->ARR10<---------YAB1       <xxxxxxxxxxxx ----ARR11(3)        --------->WRKY38(1)        ---------->DOF2 --------->ARR11(3)     <---------YAB1 --->ARR14(2)  <---------------------WRI1  <---------AtLEC2     <---------ARR11(3)     <xxxxxxxxxxxxx   atgaagagatgaaagaagtcgagtcgaccaaagcaaggcgtttgtacatggaaagatatttctctagatatcatactttagatcatattatcaaaagata  10778800               <-----------HVH21          xxxxxxxxxxxxxxxxxx>smallRNA(si3)         xxxxxxxxxxxxxxxx>smallRNA(s)         <xxxxxxxxxxxxxxxxsmallRNA(s)        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)        <---------------AtSPL3        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)      xxxxxxxxxxxxxxxx>smallRNA(i)      <xxxxxxxxxxxxxxxxsmallRNA(i)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) <---------ANAC55(2) <---------ANAC46   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2) -------TEIL   <xxxxxxxxxxxxxxxxsmallRNA(i) ---MYB46(1) xxxxxxxxxxxxxxxxxxx>smallRNA(le3) ---MYB83<xxxxxxxxxxxxxxxxsmallRNA(i) xxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxsmallRNA(s2)                                                  <---------CCA1(1) xxxxxxxxxxx>smallRNA(le3)                   ---------->DOF2                <---------RVE1(1) xxxxxxxxxxxsmallRNA(le3)      <----------DOF2                             --------->ARR11(3) ---->MYB59 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                          <---------ARR11(3) -----------AtSPL8 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                  --------->YAB1 xxxxxxxxxxxxxxxxxx>smallRNA(i2)      <---------AHL20(2)             <---------AHL20(2)         ----- xxxxxxxxxxsmallRNA(i2)     <---------ARR11(3)        --------->YAB1 --------->AHL20(2)    ---------- xxxxxxxxxxsmallRNA(si3)--------->ZAT6--------->AHL20(2)    --------->TOE2(3)    <---------HSFB2a(2)   ggtacgtagagttgtactgtccgataacactatcttttgtttaattttaaagtcgataacaatctcaacatttaaatgatattttggaagttctaaagtt  10778900                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                            <--------                                                                                            ---------                                                                                      ------>ZmHOX2a(2)                                                                                     <------ZmHOX2a(2)                                                                                    --------->ARR14(3)                                                                                    <---------ARR14(3)                                                                                    <---------ARR14(2)                                                                                    --------->ARR11(3)                                                                                    --------->AGP1<--                                                                                    --------->ARR14(2)                                                           <---------YAB1           <---------ARR11(3)                                          --------->ARR14(2)--------->ATHB12       --------->GLK1(1)                                     <-----------GT1   <---------AHL20(2)         ----------->ARR10                                <----------DOF2    --------->AHL20(2)         --------->At4g35610 ---                             <-----------GT1       <---------AHL20(2)         <---------At4g35610---- ---->ZAT18                 <-----------GT1       --------->AHL20(2)   --------->CCA1(2)------------>CBF >DOF2        <---------AHL20(2)<---------DAG2------>ZmHOX2a(1)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   cacaattgaaacatatttttttgcatatttttaactttttttcgattcctcatttatttttttcattggtgagaaatgggaactgagatcttcaataaat  10779000         --------------->AGL15         --------->TOE1(3)         ============================================================================================         <---------------AGL15                                      --------->ARR14(2)         <----------DOF2                                         <---------ANAC58    <---------AHL20(2)                                           <---------ANAC46 ->AHL20(1)                                                      <---------ANAC58 --AHL20(1)                                                  <---------ANAC58 ->AHL20(2)              <---------TOE2(3)                   --------->ALFIN1                   <---- --AHL20(2)            <---------AHL20(2)                    <---------ANAC58            <----------DOF2 -ATHB12 --------->TOE2(3)       <---------TOE2(3)      <---------LBD16              <--------------- >AHL20(2)  ---------->DOF2--------->AHL20(2)         <-----------GT1                <--------------- -------AHL20(2)       --------->AHL20(2)        --------->ICU4--------->ALFIN1 --------->At4g35610 ------>AHL20(2)      --------->AHL20(2)  ----------->GT1 --------->LBD16       <---------At4g35610 ----->AHL20(2) ----------->GT1 ---------->DOF2  --------->AHL20(2) <---------ARR14(2)*TSS      -----   taaaatttaaactttaaagagaaaattaatgaattaaagttggacagagaaatatttaaccgggtgtgcgtgtcttcgatttagcagaccggtttaggga  10779100          <---------ANAC58                                --------->YAB1 ==MADS_MADS                                             <------ZmHOX2a(2)            <<<<<<<<<TBF1 -----ARR14(2)                                       <---------HSFB2a(2)           <<<<<<<<<TBF1   <- --AG ---------->DOF2--------->ARR14(2)         <<<<<<<<<TBF1       <---------At4g35610            -- --AGL1   <---------ANAC58         ---------->DOF2   --------->HSFB2a(2)        <<<<<<<<<TBF1 ------- ---->ARR14(2)       <---------ARR14(2)  --------->ARR11(3)         --------->At4g35610       <------   tactggtttaaagcttgcaaacaaatccagtcaatttcaaagttatcttcttcttcgcgatcacaatctctgcttcgatttcttcttcttcttcagaatt  10779200          <---------DEAR3(1)         <---------LBD16       ------>ZmHOX2a(2)      --------->GLK1(1)      <---------GLK1(1)      <------ZmHOX2a(2)     --------->AGP1     <-----------ARR10       ------>ZmHOX2a(2)     --------->ARR14(3)      ===========================HOX2a_HOX2a     <---------AGP1         ============================HOX2a_HOX2a     --------->ARR11(3)     --------->CCA1(2)     <---------ARR14(2)     <------ZmHOX2a(2)                     <---------GLK1(2)     --------->ARR14(2)     --------->At4g35610               ------->TEIL     <---------ARR11(3)    --------->AGP1                 <---------------AtSPL3    <---------CCA1(2)      <---------AGP1                 <---------------AtSPL8    --------->At4g35610    <---------ARR11(3)             --------->ARR11(3) <------ZmHOX2a(2)         --------->ARR14(2)         ---------->DOF2              <-------TEIL --------At4g35610         --------->ARR11(3)    <------ZmHOX2a(1)--------->ARR14(2)               -- ------->At4g35610--------->GLK1(2)           --------->YAB1<---------SPL7      <---------ANAC58   <- -->GLK1(1)------>NtERF2   <---------ARR14(2) <-----------RAV1(2) <---------ARR14(2)    <---------ARR11(3) ---GLK1(1)--------->LBD16<---------GLK1(1)  <---------ATHB12 <---------LBD16   <---------ANAC58<----   cagatcagatctccggcgataatctttgagatctgaaatttcttacaatcaggagagaaagatgtacggattcgaggcgcttacgttcaatatccatggg  10779300                             --------->ALFIN1                           --------->DEAR3(1)   ------>NtERF2                          <------NtERF2         --------->ABI4(1)                         ------>NtERF2         ------->GAMYB                       --------->ZAT18         --------->DREB2C(2)                     --------->ANAC46          --------->DEAR3(1)               <-----------HVH21              --------->MYB46(3)              ------>ZmHOX2a(2)              --------->ABI4(1)             <------ZmHOX2a(2)              --------->AtMYB61            --------->ARR14(2)<---------ZAT2<---------ALFIN1         <------NtERF2 <---------ABI4(2)   --------->MYB46(3) ------->ARR14(2)  --------->At4g35610<---------At4g35610 --------ARR14(2)  <---------At4g35610--------->At4g35610    --------->GLK1(2) --------->GLK1(2)    - -----ANAC46<---------ARR14(2)--------->ZAT2--------->DEAR3(1)     <-----------HVH21              <--   ggatacttggaggcgatcgtcagaggccaccgtgctgggcttctcaccaccgccgattacaacaatctatgtcagtgtgagaacctagacgatatcaaga  10779400                                                      <---------ICU4                                                   --------->YAB1                                                  --------->ICU4                <---------ARR14(2)                <---------YAB1                --------->ARR14(2)              --------->YAB1               ------>MYB83                    --------->ICU4               ------>MYB46(1)                 <---------YAB1             <---------MYB111(1)           <-------GAMYB       <---------WOX13(1)        ------>NtERF2                      <----------DOF2   --------->ATHB12 <---------CCA1(2)                        <---------ANAC58  <---------YAB1 <---------At4g35610                     <-------TEIL--------->ICU4 ------>TEIL<-----------------AGL1 --------->MYB52(1)<---------YAB1                       <---------YAB1 -----TEIL ------>NtERF2 ------>ZmHOX2a(1)<---------ANAC58  ------>ZmHOX2a(1)<---------ICU4--------->YAB1   tgcatctctctgccaccaaatacggtccttacctccaaaacggtgcgttatgatgatgattcctgattgtctctcacaattttgactcagttttgataat  10779500                                                     --------->TOE2(2)                                                     --------->TOE1(2)                                                 <---------AHL20(2) --------->HSFB2a(1)                                                <---------AHL20(2)  --------->HSFC1(2)       --------->GLK1(2)                        --------->AHL20(2)  <---------HSFC1(2)      <---------GLK1(2)                  <-----------GT1            <---------HSFB2a(1)   ttgacttcgattctgggttttaggcatttcaaactctcccaaatcaccaatttaatctgcgaattgaagaaatttcgatgtgaaattttgtagtcttgtt  10779600  Previous    Next  AGI:  At3g28715.1    Description:  H+-transporting two-sector ATPase, putative. Identical to Probable vacuolar proton pump subunit d 2 [Arabidopsis Thaliana] (GB:Q9LHA4); similar to H+-transporting two-sector ATPase, putative [Arabidopsis thaliana] (TAIR:AT3G28710.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN79922.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ50869.1); similar to H+-transporting two-sector ATPase, C (AC39) subunit [Medicago truncatula] (GB:ABN08957.1); contains InterPro domain ATPase, V0 complex, subunit D (InterPro:IPR016727); contains InterPro domain ATPase, V0/A0 complex, subunit C/D; (InterPro:IPR002843) Range:  from: 10779086    to: 10781870    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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