Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              ---------->DOF2                                                      --------->ANAC58                                                      --------->ANAC46                       <---------GLK1(1)              --------->ANAC58                     --------->ATHB12               ---------->DOF2                    <---------YAB1               --------->TOE1(3)                   --------->YAB1                <-----------GT1                  <---------MYB59                  --------->YAB1             --------->YAB1                      --------->TOE2(3)      ---------->DOF2    <-------TEIL    ----------->RAV1(1)--------->GLK1(1)   --------->LBD16 <---------ATHB12      <---------ATHB12   gatgaacaacatttctaataacatgatttccaaatgcctaaaacccagaaacctaaacgcaatgaagcaaaattcaaagtcaaatcatcaaaattcgtat  10776600                                                                                   --------->CCA1(2)                                             ------->TEIL                      <------NtERF2                                           ------->GAMYB                <------MYB46(1)                                        ---------->DOF2                 <------MYB83                                     --------->YAB1                    --------->MYB111(1)                                     <---------ICU4                 <---------ARR14(2)                                    <---------YAB1                <---------RAP2.6(3)                                  --------->YAB1 <---------MYB52(1) --------->ARR14(2)  ------->TEIL                                 <------ZmHOX2a(2)               <---------ANAC46  --------->At4g35610                          <---------ATHB12--------->ANAC58      <-----------------AGL3<-------TEIL  --------->MYB46(3)    --------->WOX13(1)--------->ANAC58--------->CCA1(2) <------NtERF2   tacaacaactgagtcaaaatttgagacaatcagggatcatcataacgcaccgttttggagataagagccgtatttggtggcagagagatgcatcttgata  10776700                                                                                         ------>NtERF2                                              <---------At4g35610                        --------->LBD16                                        <---------AtMYB61                               --------->ANAC58                                        --------->ALFIN1                                --------->ANAC46                                       <-------GAMYB           <---------ANAC46      --------->ARR14(2)                                       <------NtERF2  <---------ZAT2     <------ZmHOX2a(2)                                       <---------ABI4(1)      <------NtERF2          <---------ARR14(2)                                     <---------DEAR3(1)<---------ALFIN1------->GAMYB<---------GLK1(1)                                     <---------DREB2C(2)     <---------ZAT18        --------->GLK1(1)                            --------->YAB1    --------->At4g35610     --------->MYB46(3)--------->ANAC58                           <---------YAB1<---------MYB46(3)  ------>NtERF2------>ZmHOX2a(2)                        <---------YAB1<---------MYB46(3) <---------DEAR3(1)         --------->RVE1(1)               ----------->HVH21    <---------ABI4(1) --------->ZAT2 <---------TOE2(3) <---------LBD16     <---------GLK1(2) <---------GLK1(2)<---------DEAR3(1)   --------->ABI4(2)------>NtERF2     -----   tcgtctaggttctcacactgacatagattattgtaatcggcggtggtgagaagcccagcacggtggcctctaacgatcgcctccaaatatccgccatgga  10776800                                                                         --------->DEAR3(1)                                                                        <---------LBD16                                                                        --------->ATERF1(1)                                                                       <---------RAP2.3(1)                                                                --------->YAB1                                                                <--------ATHB1                                                                -------->ATHB1                                                                <---------ICU4 --------->CCA1(2)                                                                <------------ATHB5                                                         <------ZmHOX2a(2)    --------->ARR14(2)                                                         --------->GLK1(1)    <---------ARR11(3)                                                        <---------ARR14(2)    <---------ARR14(2)                                                        <---------ARR11(3)    --------->ARR11(3)                                                        --------->AGP1 ------>NtERF2                                                        --------->ARR11(3)    --------->AGP1                                                        <---------AGP1--------->ETT(2)                                                 <---------RVE1(1)    <---------DEAR3(1)                                                --------->ARR14(2)  <-----------HVH21                                                <---------ARR11(3) <-----------RAV1(1)                                         <---------TOE1(3)      --------->ATHB12------>ZmHOX2a(2)                                         <---------TOE2(3)------>ZmHOX2a(2)   <---------ARR14(3)                             <----------DOF2    --------->ARR11(3)<---------WOX13(1)                          <---------ARR11(3)  ----------->ARR10<---------YAB1 <---------AGP1                        --------->SPL7  <---------DOF5.7(2)    --------->ICU4<---------GLK1(1)                        <-------TEIL  ===========================HOX2a_HOX2a --------->GLK1(1)                      --------->LBD16 ==========================HOX2a_HOX2a ----------->ARR10                  --------->ARR14(2)  ------>ZmHOX2a(1) --------->ARR14(2) <------NtERF2                  --------->GLK1(2)  --------->TOE2(3) <---------CCA1(2)<------NtERF2 >>>>>>>>>TBF1   <---------TOE2(3)--------------->AtSPL8 --------->TOE1(2)   <---------ATHB12<------ZmHOX2a(2)   <---------TOE1(3)--------------->AtSPL3 --------->TOE2(2)   <---------ATHB51--------->At4g35610 -->TEIL          <---------ARR14(2) --------->TOE1(3) <---------At4g35610--------->LBD16   tgttgaaggtaagcgcctcgaatccgtacatctttctctccttaacgtaagatattcagatctcaatgattgtcgccggagatctgaagaagaaatcgat  10776900                                                                             <-------GAMYB                                                                           <---------YAB1                                                                           <---------TOE2(3)                                                                          <---------At5g28300                                                                         <-----------GT1                                                                  ------->MYC2                                                                  ------->MYC3               >>>>>>>>>TBF1                                      <-------MYC2        --------->ANAC46                                          <-------MYC3<---------MYB52(1)  ---     <---------WRKY12                                            ----------->GT1                <----    <------ZmHOX2a(2)                                            --------->ANAC58     ------>ZmHOX2a(1)   <---------ARR11(3)                                            --------->ANAC58     <----------DOF2   --------->ARR11(3)               <---------WOX13(1)          *TSS --------->AHL20(2)        <-----  --------->GLK1(1)               --------->ATHB12         <--------P<---------AHL20(2)   <----------   acagagatcaacgcgaagaagaagatagcttcgaattgattggatttgtttgcaaactcgtgttggcacgtttaattacggttgtgtcctttaaaccggt  10777000                                                                                       <---------AHL20(2)                                                                                       --------->AHL20(2)                                                                                    <---------AHL20(2)                                    <---------CCA1(2)                               --------->AHL20(2)                              <---------YAB1                                     --------->YAB1                            --------->AHL20(2)                                  <---------YAB1                           <---------AHL20(2)                                   <---------AHL20(2)                  <---------At4g35610                                          <---------AHL20(2)                  --------->At4g35610   ------------>CBF      <---------AtMYB61--------->AHL20(2) -------->GT1    --------->ANAC46 <---------ANAC58   --------->ATHB12          --------->AHL20(1) -----ANAC46    ------->TEIL<---------AHL20(2)   <---------ANAC58              <---------AHL20(1) ----MYB52(1)   --------->ZAT18 <-----------GT1  <---------ANAC58         --------->AHL20(2)  ------- -GT1       <---------------AtSPL8<---------ANAC58<----------DOF2   <-----------GT1--------->AHL20(2)   gtgttaaaccgaagaatgtacgctgcaaaattattttcgtctctcaattttgctttgatttgttttggtttatcgatataatataataaataaatataaa  10777100                                                                                                   --                                                                                                  ---                                                                                               ------                                  <---------YAB1               --------->ARR11(3)             <------                           <---------AHL20(1)                  --------->AHL20(1)          <---------AHL20(2)                           <---------AHL20(2)                  <---------ARR11(3)          --------->AHL20(2)                           --------->AHL20(2)                 --------->CCA1(1)      --------->TOE2(3)                        --------->YAB1                        --------->RVE1(1)      <----------DOF2                     --------->TOE2(3)                <-------TEIL                <---------ARR11(3)               --------------->AtSPL8   <----------DOF2 ----------->RAV1(1)       --------->ARR11(3)           --------->GLK1(1)   --------->GLK1(2)   --------->At4g35610--------->GLK1(1)   --------->AHL20(2)  <---------GLK1(2)  <----------DOF2    --------->TOE2(3) --------->MYB46(3)   ----------->GT1------- --->DOF2  <---------GLK1(1)<---------AHL20(2)     <---------At4g35610<---------GLK1(1) --------->YAB1   gacagaatttcagaaatccagtactttaataaaattctgatactttaaaatccagatgcaacaaatatcttgatatccaaatggtatctttaataaataa  10777200                                                              --------->ARR11(3)                                                              --------->AHL20(1)                                   --------->AHL20(2)         <---------AHL20(1)           ----------->GT1       <---------------AGL15   --------->AHL20(2) ------->AHL20(2)           <----------DOF2     <-----------GT1  <---------AHL20(2) ------>AHL20(2)        ------->GAMYB           <---------AHL20(2)<---------YAB1 --->AHL20(2)          --------->MYB46(3)    <---------ICU4   <---------ARR11(3)             -------- ---AHL20(2)           <---------MYB52(2)   --------->ICU4   <---------AHL20(2)       ----------->GT1 -->AHL20(2)        <----------ID1 <---------AHL20(2)    <---------AHL20(2)     --------->AHL20(2)  -   ataaaaaactaatatgtgaaaaacaacaaacttttatttatatggaatatttacattttttaaatatttttattcgtagcaaaaaaatatgtgaaataaa  10777300                             <---------AHL20(2)                         <---------RVE1(1)                         <---------CCA1(1)          <---------AHL20(2)                       <-------                  <---------ANAC58                  --------->AHL20(2)                      ---------                  <---------ANAC58    --------->ANAC58                                      ---------    --------->ANAC46    --------->ARR11(3) --------->ARR14(2)                             <---------LBD16 ->AHL20(2)      --------->ATHB12     --------->ANAC58                                   --------->MYB52(1) ---------->RAV1(1)     <---------ARR11(3) <---------ARR14(2)                   <---------ZAT6   tccaacacaaaacacaaaatgcttgggatattttttggataagcaaattcgaatttatatgttttgagagaacaccaaaattgtgttagattaccggtaa  10777400                                                                               ----------->GT1                                                                               xxxxxxxxxxxxxxxxxxxxxx                                                                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                           <---------TOE2(2)                                                                <---------HSFB2a(2)                                                                --------->HSFC1(1)    <---------TOE2(3)      --------->ANAC55(2)                                   xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)      <---------ANAC55(2)        <---------AHL20(2)        ------->TEIL    <---------TOE1(2)   ------  <---------GLK1(2)       ----------->GT1               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<-------- --MYB52(1)              --------->DAG2          <----------DOF2--------->HSFB2a(2)   xxxxxxxxxxxxxxx -->GT1                 ---------->DOF2      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)    <---------YAB1 >LBD16        <---------At4g35610 <-----------GT1   <-----------GT1     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)   tatagattatgtgattcaactcatagaaaagtgaatttatctacattttttcttttatctggacctctagaaaatcgtagattgtattaagatggtgttg  10777500  Previous    Next  AGI:  At3g28710.1    Description:  H+-transporting two-sector ATPase, putative. Identical to Probable vacuolar proton pump subunit d 1 [Arabidopsis Thaliana] (GB:Q9LJI5); similar to H+-transporting two-sector ATPase, putative [Arabidopsis thaliana] (TAIR:AT3G28715.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN79922.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ50869.1); similar to H+-transporting two-sector ATPase, C (AC39) subunit [Medicago truncatula] (GB:ABN08957.1); contains InterPro domain ATPase, V0 complex, subunit D (InterPro:IPR016727); contains InterPro domain ATPase, V0/A0 complex, subunit C/D; (InterPro:IPR002843) Range:  from: 10774140    to: 10776964    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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