Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    <---------AHL20(1)                                                  <---------AHL20(2)                                                  --------->AHL20(1)                                                  --------->AHL20(2)                                             --------->AHL20(2)                                             <---------AHL20(2)                                     <---------AHL20(1)         --------->AHL20(2)                                     --------->AHL20(1)         <---------AHL20(2)                                  <---------AHL20(2)    <---------YAB1                --------->YAB1                                  --------->AHL20(2) <---------AHL20(2)              <---------YAB1 <                           <-----------GT1 <---------YAB1--------->YAB1<-----------GT1--------->ATHB12  --------->AHL20(2)    <---------YAB1  <---------AHL20(2) <---------YAB1          --------->YAB1 <-- ------->YAB1          --------->AHL20(2) <---------AHL20(2)--------->AHL20(2)  <----------DOF2   <--   ttcataatataagttattttcaaatttttatacaaattatatattattttaatattttatgattatttatattatacagtctcttttatgattagttgaa  10723300           --------->ICU4        --------->AHL20(2)                                                            <---------At4g35610      ----------->GT1         <----------DOF2                                  <---------ICU4    ---------->DOF2        --------->ARR11(3)                                 <---------ATHB51 xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                     --------->ANAC58       <------ -------DAG2               <---------ARR11(3)                          --------->ANAC58 ------->GAMYB --------DOF2   --------->TOE2(3) ----------->GT1   ----------->GT1<-----------GT1    --------->At4g35610   ctttttaaaagtaaatattcttaatctaagttcttttagttaaaacaacttatattgtaaaacagtgtataacaagtcaaattatggcaactgaaaaatt  10723400                                                                     <---------AHL20(2)                                                                     --------->AHL20(2)                                                                     <---------ICU4                                                                     <--------ATHB1                                          <---------YAB1             --------->ATHB51                                          <---------TOE2(3)         <---------YAB1                                        --------->AHL20(2)      --------->AHL20(1)                                        <---------AHL20(2)      --------->AHL20(2)                               --------->REM1(1)          ----------->GT1                             <-----------GT1<------------CBF   --------->YAB1                             --------->HSFB2a(2)          <----------ID1                            -                      --------->YAB1   --------->AHL20(2)----------->GT1       ---------->DOF2   ----                     <---------YAB1    <---------ATHB12---------->DOF2    ----------->GT1        ----                  <---------YAB1   ------------>CBF <---------ZAT6  --------->ICU4        --------->ALFIN1 ------CBF---------->DOF2    <---------HSFB2a(2)  ----------->GT1 --------->YAB1--------->DAG2<------NtERF2   gtttgaaccgaataaagcttactataattttctacaactcaattaatattggtagtgaaaaggaaaaataataatttggaaaaaagtaatagggggggca  10723500           ----------->GT1      ---------->DOF2    ----------------->AGL1                   <----------DOF2   <-----------------AGL1      <---------ARR11(3)                         --------->ANAC55(2) <---------GLK1(1)             --------->ARR11(3)                   --------->AHL20(2)    ----------- --------->GLK1(1)            <---------CCA1(2)                     ----------->TBP       <---------AHL20(2) -------->ARR14(2)       <-------TEIL   ---------->ID1            <----------DOF2         --------->AHL20(2) ----->ANAC58        ------->TEIL     <-----------RAV1(1)        --------->TOE2(3)      ----------->TBP ----->ANAC58     --------->AtLEC2<----------DOF2            --------->GLK1(1)  --------->YAB1      -   aggatttccaaagtggaaacatgcacatacatatatctttttgttgtcttttcgaatagacacatttcctttatatatgtaataaaaactatatatatac  10723600                                                                           --------->ATHB12                   --------->MYB46(3)                                     <---------YAB1            --------->ANAC58                                              --------->ICU4            --------->ANAC58                                            <---------ICU4          ------->GAMYB                                      ----------->GT1         --------->MYB46(3)                                <------ZmHOX2a(2)         <---------MYB55(2)                               --------->ARR14(2)        ------>MYB83                            ------>ZmHOX2a(2)       -------->HAHB4        ------>MYB46(1)                        <------ZmHOX2a(2)        --------->YAB1        -------->P------>MYB46(1)             --------->ARR11(3)     <---------ICU4       ------>MYB46(1)                        <---------ARR11(3)     --------->YAB1       ------>MYB83<---------MYB111(1)        <---------AGP1------>ZmHOX2a(2)     <---------MYB59                      ---------->DOF2 <---------ARR14(2)    --------->ANAC58                  <----------ID1 <---------ARR14(2)--------->ICU4    --------->ANAC58      =============================HOX2a_HOX2a  --------->ICU4         <------MYB83    --------->ANAC46      ============================HOX2a_HOX2a  --------->AHL20(1)      <------MYB46(1) >TBP--------->MYB46(3)   ------>ZmHOX2a(1)  --------->RVE1(1)    --------->YAB1  --------->GLK1(1) -------->YAB1    ------>MYB83      ---------->DOF2  --------->ARR14(2)<---------YAB1<-------TEIL   tctcatacccaaccacgaccaactactcctaacaacaaaaaagaaaaagatctcaaatacgatctgaaaaataatgatgatgggaaatacatttggttca  10723700                                             --------->HSFB2a(2)                                        --------->HSFB2a(1)                                       <-----------ARR10               <---------YAB1          --------->ARR11(3)            ---------->DOF2    --------->ANAC46           --------->KAN4(2)           <---------ARR14(2)           --------->AHL20(2)--------->ANAC46    <---------ANAC58                   <---------ARR11(3)  <---------GLK1(2)    <---------CCA1(2)    <---------ANAC58                --------->MYB46(3)     <---------ARR14(2) <---------ANAC58    <---------ANAC46 <---------ANAC46  --------->ARR14(2)  --------->ARR14(2) <---------ANAC58  -----   agtttggcgagtttattcttcttgtgggcaactattcaacaaatcttcccaaaccatctcagaatcgccattaaagagtttcttatctccacaatacaac  10723800                              <-------TEIL                                                       <---                       ----------->RAV1(1)                                                       ----                      <---------ETT(1)                                                           ----                      --------->ANAC46                                                           ----                      ----------->HVH21                                                          ----                <---------GLK1(2)                                                             <------                <---------ARR11(3)              <----------DOF2                             ---------                --------->ARR11(3)          ---------->ID1      <---------GLK1(2)<---------GLK1(2)            --------->LBD16 <---------GLK1(2)   <---------DAG2 --------->At4g35610   <---------YAB1 ---->MYB46(3) <---------RVE1(1)         <----------DOF2       <---------At4g35610  <-----------GT1   aactctcatttgtccagagattttccgacagattcatcaacttcttttcgccttatgtcgaaatcagcttctctcaatacgaagattatcaattcaatca  10723900                                             <----------ID1                                            --------->DAG2       ------>NtERF2                 --------->At4g35610 ------ANAC55(2)                     <---------At4g35610                                  <------MYB83 ----->ANAC58                       --------->MYB52(1)                                    <------MYB46(1) ----->ANAC55(2)                 --------->ANAC58               --------->ANAC46         <---------AtMYB61 ----->ANAC46                    --------->ANAC46               --------->ANAC58    <---------TOE1(3) ----->ANAC58                    --------->ANAC58 --------->ANAC58                  <---------TOE2(3) ---ATHB12              --------->ALFIN1   ---------->DOF2      --------->ANAC58  ---------->DOF2 >WOX13(1)          -------->P ---------->DOF2    --------->ANAC58       ---------->DOF2 --------->MYB59   cgcatttgcagccattgagacttaccttggggcaaaagcaactgataaagccaagcatctaagagcaagccaagttaaagagagtaaaggtttggtcttg  10724000                                                                           --------->CCA1(2)                                                                          --------->ARR14(2)                                                                          <---------ARR11(3)                                                                          <---------ARR14(2)                                                                          --------->ARR11(3)                                                                         <------ZmHOX2a(1)                                                 <---------MYB46(3) <---------ALFIN1                   <---------HSFB2a(2)          --------->ALFIN1   <---------ZAT14            ---------->DOF2       <------ZmHOX2a(1)             ------>MYB83     <---------O2 <---------TOE1(1)          <---------MYB46(3) ------>MYB46(1)                <-----     --------->O2 <---------TOE2(1)<---------------AtSPL8    --------->DEAR3(2)   --------->KAN4(1)   aaacgagacgagactaaagtccgagatgagtatgaaggaggtactgtctggtgggagatggaaaccgactccacaggatatagaacattcaaactcactt  10724100                           ------>MYB83                           ------>MYB46(1)                         ------->GAMYB                        --------->DEAR3(2)                                           <---------At4g35610                        <------------MYB.PH3(1)                                      --------->At4g35610                        --------->MYB46(3)                                       --------->ANAC58                        <------------AtMYB77                          --------->ANAC46                      <-----------GT1                                 --------->ANAC58               --------->ARR11(3)                                     --------->ANAC58 -----DOF2     <---------ARR11(3)    --------->AHL20(2) ----------->GT1          --------->ANAC58   tccatagacgctcgcgagatattgtaaccgactcttacataaaatatgtttttgaagaaggcaaatcgattcaagccaagagcaagcagatgaagttgtt  10724200  Previous    Next  AGI:  At3g28600.1    Description:  ATP binding / ATPase. similar to ATP binding / ATPase [Arabidopsis thaliana] (TAIR:AT3G28610.1); similar to AAA-type ATPase family protein [Arabidopsis thaliana] (TAIR:AT5G40000.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14845.1); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593); contains InterPro domain AAA ATPase, core; (InterPro:IPR003959) Range:  from: 10723674    to: 10725232    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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