Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             --------->TOE2(3)                                                                          --------->ATHB12                                                                          <---------ICU4                                                                          <--------HAHB4                                                                         <---------YAB1                                                                         --------->ICU4          <---                                                                       --------->YAB1            ----                                                                       <---------ICU4            ----         <---------AHL20(2)                                   <------ZmHOX2a(1)                  <---      ------->TEIL                                <---------YAB1      <---------YAB1<---------ARR11(3)   --------->AtLEC2    --------->GLK1(2)         <---------AHL20(2)  <---------ARR11(3)     --------- --------->YAB1       <---------GLK1(2)          --------->AHL20(1)  --------->ARR11(3) ---------->DOF2 ---------ATHB12      <---------ARR11(3)         <---------AHL20(1) --------->YAB1--------->ANAC58 ----GT1 --------->AHL20(2)                     --------->AHL20(2) --------->ICU4 --------->ANAC58   ctatcatgcattttaatggaccaagattcttaagttttctaatggatagattatatttcatgtaggaaaatgatcatcattagcaagaactaaagagaaa  10716500            --------->TOE2(3)           <--------HAHB4           --------->ATHB12           <---------ICU4          --------->ICU4          <---------YAB1        <---------ICU4        --------->YAB1      --------->ARR11(3)      <---------ARR11(3)     --------->YAB1     -------->HAHB4     <---------ICU4    --------->ICU4    <---------ATHB12 ------>ZmHOX2a(1) ------ARR11(3) ----->GLK1(2)                        <----------DOF2                                           ----- ----->ARR14(2)                 ---------->DOF2           <--------P                          ------- ------ARR14(2)      --------->ARR11(3)                 <---------ANAC46                      ------- -->GT1<---------YAB1<---------ARR11(3)    --------->ZAT6<-------GAMYB  ---------->DOF2     <------ZmHOX2a(1)   atcctaatgatcatcattaacaagaactagagagaaaagtctttaaaactacatagtggggttgtctatttgtttaaagctcgtcaaatttggaggaagc  10716600                                      --------->DAG2 --------->AHL20(2)                  ---------->DOF2          --------->ANAC58 ------------>AGL3                  <---------ATHB12          --------->ANAC58       <----------DOF2 -->ANAC58                --------->ATHB12                    --------->ANAC46  ---------->ID1 -->ANAC58               <---------YAB1                      --------->LBD16 <----------DOF2 <-------   catatatataaaacttgactaacaagtttgattagtcaataaagcacatttgagttcttaatccgagcaatttccttctcttttcgtcttttcgactttt  10716700                                                              <---------ANAC58                                                           ------->MYC4                                                           <-------MYC3                                                           ------->MYC2                                                           ------->MYC3                                                           <-------MYC2                        ------                                                        <---------TGA1a                      <-------                                                        --------->O2                   --------->AHL20(2)                                  --------->DAG2        --------->TGA1a                <---------AHL20(2)                                 --------->SPL7         <---------O2                   --------->YAB1                                <---------MYB52(1)   ----------->HVH21              --------->YAB1                    ==============================================bZIP_DOF         --------->AHL20(2)                    ---------->DOF2----------->GT1  <-----------HVH21             --------->AHL20(2)               <---------------AGL15               --------->bZIP60(1)         --------->AHL20(2)               --------------->AGL15               <---------TGA2(1)           <---------AHL20(2)              ----------------->AGL2               --------->TGA2(1)           --------->AHL20(1)              ----------------->AGL3        <---------ANAC58  <---------ANAC58--------->AHL20(2)          <---------DAG2       <---------SPL7      <---------bZIP60(1) <-------TEIL<---------AHL20(2) ---DOF2  <----------DOF2    ---------->ID1 <---------ANAC58 <-------TEIL     <---------AHL20(2)   gttttttatgcccttttccatataaagttttgtcgtaaggtaatttccttgtgatgtcacatgtgcatgcgcatacataaaaaaattaataatataacgt  10716800                                                   --------->MYB46(3)                                                 <---------ARR14(2)                                                 --------->ARR14(2)                                              <---------HSFB2a(2)                                              --------->HSFB2a(2)                                          <---------ZAT18                                          --------->ZAT18                                     -------                                   --------->ARR11(3)                                         <------ ---------->DOF2           <---------YAB1<---------ANAC58                                     ------- --->TOE2(3)          <-----------GT1    <---------ANAC58   *TSS   --------->LBD16           <------- --TOE2(3)      <-------TEIL      <---------At4g35610  <---------ALFIN1  --------->ZAT6   --------->YAB1   tgataaagacttctcaagtccatataactatcatttagctcttgtgtaccagaaccaccatcttcttcccccataacactcttcttctctcatcaaaatc  10716900                        --------->ANAC58                                               <---------MYB52(1)                        --------->ANAC46                                              <-------GAMYB        --------->HSFB2a(1)                                                       <-----------HVH21        <---------HSFB2a(1)--------->GLK1(1)       ---------->DOF2              <---------MYB46(3) -->ARR11(3)        ------>ZmHOX2a(2)         --------->ANAC46              ----------->HVH21 ---ARR11(3)  <----------DOF2        ---------->DOF2                        <---------YAB1 -->GLK1(2)------>MYB83 --------->ANAC58      --------->ANAC58              --------->ICU4 --GLK1(2) ------>MYB46(1) <---------GLK1(1)  --------->ANAC58----------->GT1--------->ATHB12   tctaactcaaaccttcctttgatcccaagaaatctcttccaaagccctaagccaaaagcttcaagagaaaaaatggcgatgatgggtcagttatggacta  10717000                                                                                --------->MYB46(3)                                                                         <---------ZAT2                                                                         --------->ZAT2                  --------->ZAT6                                       <-----------RAV1(2)                ----------->RAV1(1)                                 --------->ANAC58        <---------At4g35610                                         --------->ANAC58   <----------DOF2    --------->ARR14(2)            --------->ANAC46                  <-----------------AGL1    <---------ARR14(2) <---------TOE2(3)--------->YAB1             --------->SPL7     --------->TOE2(3)   acacaggctctgctcttgcaacactaatgtttgtatacacaatcttcaaacaattcttccctctcttcggaccccagttggaaccattcctttatagact  10717100                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                        --------->AGP1                                                                                      --------->LBD16                                                                                    ------>ZmHOX2a(2)                                            --------->At4g35610                    <------ZmHOX2a(2)                                            <---------LBD16                       <---------ARR14(2)  <-----------HVH21        <-----------GT1  <---------At4g35610                   --------->ARR14(2)-   cttcggtcgcttctacccttacatccaaataacattccatgaatacagcggagagcatttcaagagaagcgaagcctacttggggatccagagctatcta  10717200                                                                                               ------                                                                                           <---------ZAT14                                                                                           <------ZmHOX2a(2)                                                        <---------ARR14(2)                --------->ARR11(3)                                                   --------->ANAC58                 <------ZmHOX2a(1)                                                   --------->ANAC58                 ==============HOX2a_HOX2a         <---------At4g35610                 ---------->DOF2                      <---------TOE2(3) ----->ANAC58                         --------->ANAC46  <---------ARR11(1)        --------->ANAC58 ----->ANAC46                 ---------->DOF2--------->MYB52(1)                   --------->ANAC58 ----->ANAC58           <---------GLK1(2)  <---------MYB52(2)          <---------AtLEC2   <---------ARR11(3) --------->DOF2     ---------->DOF2 ----------->RAV1(1) --------->GLK1(2)     --------->YAB1   ------   agcaaagactcttctgctagagcaaagaaactcaaagccaacacaactaaaggaagcaaatctattgttcttagcatggatgataaggaagagatcactg  10717300                     <---------ANAC58                     <------MYB46(1)                     <---------ANAC58                     <------MYB83                    --------->MYB111(1)                    --------->MYB46(2)                    <---------MYB46(3)                    --------->MYB111(2)                                <---------LBD16                    <---------AtMYB61                                  ----------->RAV1(2)                    --------->MYB55(2)                        ---------->ID1                   <-----               <---------TOE1(3)            --------->At4g35610      <---------At5g28300   <---------ARR11(3)         --------->ZAT18 <------NtERF2      <---------At4g35610     <-----------GT1        --------->ARR11(3) ----->HVH21   <---------TOE2(3)          --------->ZAT18 <----------DOF2          --------->YAB1---- ----->TGA1<----------DOF2         ---------->DOF2      <---------ATHB12     <---------At4g35610 <---   acgattttgagggcattagggtttggtggcagtcgaagaaagagggagctactaggcaatctttctcgttttaccctgaagctaatgagaagagatatta  10717400  Previous    Next  AGI:  At3g28580.1    Description:  AAA-type ATPase family protein. similar to AATP1 (AAA-ATPASE 1), ATP binding / ATPase [Arabidopsis thaliana] (TAIR:AT5G40010.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14849.1); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593); contains InterPro domain AAA ATPase, core; (InterPro:IPR003959) Range:  from: 10716860    to: 10718566    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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