Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            --------------->AGL15                                                                          <---------------AGL15                        <-----------GT1                                  <-----------------AGL3     <-----------GT1    <---------AHL20(2)                             <-----------GT1 ------->TOE2(3)    --------->AHL20(2)                                --------->AHL20(2) ------->YAB1       <---------AHL20(2)                                <---------AHL20(2) --->TEIL          <---------AHL20(2)                             <---------YAB1 -----CCA1(2)----------->GT1                                <----------DOF2   atcttaatttccctatagttatttatttacttcttcattttcatgttcaaaaatttgaatttctttttctaattaactaaatttagtttctctaaatttc  10689200                  <---------YAB1             <----------DOF2                                                        --------->DAG2          <-----------GT1                                        <---------AHL20(2)---------->DOF2     --------->AHL20(1)                 <-----------GT1     <---------YAB1  --------->TOE1(2)    ----     <---------AHL20(1)<-----------GT1<-----------HVH21  --------->GLK1(2)  --------->TOE2(2)    <---   atactaatatttttacttttatttttaacaattagacaaatgtcactgttcaaaatgagcttctgattttatctgaaacatatgaaaaagcttacaaatt  10689300                                                   <---------ARR11(3)                                                   <---------GLK1(2)                                                 <---------TOE2(3)                                            --------->AHL20(2)                                            <---------AHL20(2)             ------------>CBF              --------->AHL20(2)   --------->AHL20(2)                      <---------AHL20(1)  --------->AHL20(2)                       <---------AHL20(2)                <---------WOX13(1)   <--  <---------AHL20(2)                  ------------>CBF  --------------->AtSPL8             --------->TOE2(3) <---------AHL20(2)                 --------->REM1(1) <-----------GT1       <------------CBF      <-- --------->AHL20(2)               ------>ZmHOX2a(1)--------->ARR11(3)     --------->AHL20(2)   <----- ----->AHL20(2)              <---------At4g35610 ----------->ARR10        <---------AHL20(2)<<<<<<<<<MYB98 ------AHL20(2)      --------->ARR11(3)    --------->AHL20(1)     <---------AHL20(2)      -----------   taaattaatatatgcttcaatgttatcttgaagctccttcatcaatttaataagattttctctaccatttttttgtttaattgatatttgctatgttaaa  10689400                                                             --------->AHL20(2)                                                             <---------YAB1                                                             <---------AHL20(2)  <-----------GT1                               <---------ARR11(3) -------DAG2                                    --------->ARR11(3)                              <---- --------DOF2     ---------->DOF2              --------->CCA1(1)                                ----- ------GT1    --------->ZAT6        ---------->DOF2      ----------->TBP          ---------->DOF2 >GT1       -------->P      ---------->DOF2    --------->RVE1(1)      ---------->DOF2     ---------->DOF2   cttttttctagccttaccactaaagacttaaaaagccctaaagactaaaatatcatgctatatataattagttaaagcacatctcaaagtctcaaagaga  10689500                           <------ZmHOX2a(1)                          <------MYB46(1)                          <------MYB83                        <--------P                 <---------ANAC58          ---------->DOF2--------->MYB59                    <---------ANAC58   --------->MYB46(3)<---------TOE2(3)                      <---------ANAC46         <<<<<<<<<EIN3 -----ARR11(3)   <---------ANAC58          <-----------GT1  <---------ANAC58   >>>>>>>>>>>>>>>>>LFY ---->ARR11(3) <---------YAB1------------>CBF     --------->SPL7          <---------YAB1  <----------   acttaacaaacacaaagatgcttgaggtaggaacaatatggggtttcaccagtacgactatggcgagtattatgttcttatggccaatgtataaacagtt  10689600                                                                                                -----                                                                                               ------                                                                                              <------                                                                                           --------->GLK1(1)                  <---------ARR14(2)                                                      <---------GLK1(2)              --------->HSFB2a(2)                             --------->LBD16             --------->ARR14(2)         ------>MYB46(1)                                     <---------ANAC46             <---------ARR14(2) -GT1    ------>MYB83                --------->YAB1         <---------LBD16              --------->At4g35610   tgtgccataccaactacgagaatacttggaaaacaccattcagaagtatttggacaagttgttccgcagggactcaaattttgtttacatcagattccct  10689700                                             --------->ANAC58                                           --------->CCA1(2)       <------ZmHOX2a(1)          --------->SPL7    <-----------RAV1(2)    --------->DEAR3(1)--------->ANAC58 ---->LBD16           ---------->DOF2   ----------->ARR10            <---------At4g35610            < --->LBD16   --------->ARR11(3) --------->TOE1(2)                    --------->At4g35610    <-------- ---LBD16    <---------ARR11(3) --------->TOE2(2)           ------>ZmHOX2a(1)            ---------->DOF2   gaatacacaggagaaggtctaagtaaaagccgagcctacgatgagataggcaactatttatcctcgatatcaactgctagagccaagagattaaaggcca  10689800                           <----------DOF2                      <---------MYB46(3)            <---------REM1(1)                      <---------DEAR3(2)          --------->At4g35610                      <------MYB83                <-------GAMYB                      <------MYB46(1)             <---------At4g35610                              <-                     <---------TOE2(2)     <---------bZIP60(2)                                  -----                     <---------TOE1(2)     <---------O2                            <---------AtMYB61 --------->GLK1(2)  <---------MYB52(1)   ------>NtERF2                          <---------SPL7 ------ ---------GLK1(2) --------->ATHB12      --------->DEAR3(1)                   ------->MYC3     ------- --ID1           <---------ATHB12     <---------ATERF1(1)                    <-------MYC3  <---------ALFIN1   aagaatcggaaaacagcaaatcgttggttctttgtttggacgacgacgaggcagttgtagttgtattccaaggtgtaaacgtggtatggtcttccaccgt  10689900                                       <---------ANAC58                                       <---------ANAC58                                      <-------TEIL                                   <------MYB46(1)                        <---------AHL20(2)                                   <------MYB83                         --------->CCA1(2)    ---------->DOF2                <---------HSFC1(2)                  <---------ARR11(3) -------P----------->GT1           --------->HSFB2a(1)         <---------YAB1 ---->ALFIN1                       --------->HSFC1(2)        <---------ICU4   --------->YAB1 --->LBD16<------ZmHOX2a(1) <------ZmHOX2a(1)      <----------DOF2     --------->ARR11(3) -->DEAR3(1)    --------->YAB1     <---------HSFB2a(1)       --------->YAB1--------->YAB1     -------   ggtagataaagaggataaacataattcgaaggagggaaggtacttgactctgactttcgaaaatcatcacagagatataatcacaaacacttatattgat  10690000                             <---------DOF5.7(2)                             ---------->DOF2                <---------ICU4                           --------->DOF5.7(2)       --------->ZAT6                         <---------ANAC58           --------->ZAT14                         <---------ANAC46           <---------ZAT14                         <---------ANAC58      --------->At4g35610        --------->ICU4      <------ZmHOX2a(1) -->YAB1       ---------->DOF2              <------ZmHOX2a(1)  --------->YAB1          <---------ANAC46   catgttttgagagaaggaaaagagattgcgttaaagaacagagagaggaagctctacactaacaatgacagtagtagttattcgtcttggtgggaaggac  10690100  Previous    Next  AGI:  At3g28520.1    Description:  AAA-type ATPase family protein. similar to AAA-type ATPase family protein [Arabidopsis thaliana] (TAIR:AT3G28540.2); similar to AAA-type ATPase family protein [Arabidopsis thaliana] (TAIR:AT3G28540.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN79616.1); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593); contains InterPro domain AAA ATPase, core; (InterPro:IPR003959) Range:  from: 10689560    to: 10690996    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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