Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             ----------                                                                                          <---------TOE2(3)                                          ---------->DOF2                               --------->YAB1                                  --------->YAB1                <---------ICU4          <---------ICU4                            <---------------AGL15  <---------At4g35610                  --------->ATHB51            <----------DOF2 --------->HSFB2a(2) <-------TEIL    --------->YAB1         <---------ATHB51 --------ATHB12             --------------->AGL15  <---------CCA1(2)                   --------->ICU4   actcattttctcttctttccttctcgccttctacaatgagaactaaaagtttcatctctcaactattcatcacaaaccaaaaaaaaacaattatggaaaa  10675200                                           <-----------GT1                                        --------->YAB1              <---------ANAC58              ---                                     --------->YAB1                 <---------ANAC58              ---                                --------->TOE2(3)           ----------->RAV1(1)                   ---                               --------->ATHB12          --------->ANAC58                         <--                               <--------HAHB4            --------->ANAC46                        <---                               <---------ICU4            --------->ANAC58                      ------        --------->TOE2(3)     --------->ICU4            --------->HSFB2a(2)                <---------ARR14(2) --------->MYB52(1)    ---------->DOF2 <---------YAB1   <---------HSFB2a(2)------>ZmHOX2a(1)   ------ ->GT1<---------ARR11(3)      <---------YAB1    <---------CCA1(2) <---------ARR11(3)       --------->ARR14(2)   aaaaaacagaccttagattgagacccaaagtcatcattagcatcataaccatatcgttccagcaacaatttcttatcctcacttgccaaaccagttcctg  10675300         --------->ANAC46                                                                          <-      ------------------------>ANAC81                                                              <- ------>GLK1(2)                                                                                    -- ---->TEIL   --------->ANAC58                                                                      <- ------>ARR14(2)                                               <-------TEIL       --------->ANAC46 -- -------ARR14(2)                                 <---------GLK1(2)              <-----------GT1    -- ------GLK1(2)              ---------->DOF2<---------YAB1---------->DOF2     <---------DAG2       --- >ZmHOX2a(1) --------->ANAC46          <---------DAG2<---------ANAC46        <----------DOF2      <-- --->LBD16   --------->ANAC58          <----------DOF2 ----------->HVH21<-----------GT1     <--------   aatctgaaaacccacaagacataaactgagaaaagacagaactttatgaatgattctgtgaaagatgcaaaatttcacacttttacgactcgagacgacg  10675400               <---------ZAT18               <---------ZAT14         --------->ANAC58         --------->ANAC46 --------HSFB2a(1)                                                      --------->GLK1(2) --------HSFC1(2)                      ------->TEIL        --------->ANAC58 ------->HSFC1(2)            ---------->DOF2               <---------ANAC55(2) --------KAN4(1) <---------ANAC46   <XXXXXXXXXXXXXXXXXXXXMIR865-3P     <---------GLK1(2) ------->KAN4(1)<-----------------------TaNAC69(2)         --------->ANAC46 ------->HSFB2a(1)        --------->TOE1(3)                --------->ANAC58<---------YAB1 ---->TEIL    --------->ALFIN1    --------->CCA1(2)        --------->ANAC55(2)                    --- -------KAN4(2)--------->ZAT14 <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)     <---------ARR14(2)  <---------YAB1 --ID1   --------->ANAC58 --------->TOE2(3)     ---------->DOF2        --------->ARR14(2)--------->YAB1   aatgttcgaacacgcagtggagtagaacccttaaagagatgaatttgagggaaagaagaatacgaaacacccagattcttattcatgtcaatgttgattc  10675500                                       --------->DAG2                         --------->ANAC46                         --------->RAP2.6(2)              <---------ANAC58                         ------->GAMYB---------->DOF2     <---------ANAC58                         --------->DEAR3(1)              --------->At4g35610                      --------->ARR14(2)                 --------->ZAT2       <---------ZAT14                      <---------ARR14(2)                 <---------At4g35610  <---------At4g35610        ---------->DOF2 --------->MYB46(3)               <---------ZAT2       --------->ZAT14--------  <---------ZAT14     --------->MYB52(1)                XXXXXXXXXXXXXXXXXXXXX>MIR173         -------- --->ZmHOX2a(1) <----------ID1   <---------ANAC46 <----------DOF2             --------->At4g35610   ctagtggagagaaagatgacaacaaaaccgccattgctgataaagttttcgactttgggagcttgcagagagaaatcgtctgcagagaagacgaatgata  10675600                                  ------>ZmHOX2a(2)                                 <------ZmHOX2a(2)                                <---------ARR11(3)                                <---------AGP1                                --------->ARR14(2)                                *TSS                                --------->ARR11(3)                                <---------ARR14(2)                                --------->GLK1(2)                                <-----------ARR10                               <------ZmHOX2a(1)         --------->AHL20(2)    <---------ZAT6   --------->LBD16                     <---------AHL20(2)    ----------->GT1 --------->HSFB2a(2)              ----------->GT1 ->YAB1             <---------HSFB2a(2)           --------->DAG2 ->ATHB12 <-----------GT1 <-----------RAV1(2)   ---------->DOF2     <----------DOF2    ----------->GT1   gaaatagagttaaaaccttcttccagagccagaggatctatttctgtatcaaaaggtgtttaattttgagctttgtatttcaagagacttggttactact  10675700                             <---------ARR11(3)                             --------->ARR11(3)                --------->YAB1--------->CCA1(2)               <---------------AGL15               --------------->AGL15         <---------------AtSPL8                                 --------->YAB1      ----------->GT1         --------------->AtSPL8  <-----------GT1     --------->ARR11(3) ----------->GT1           <--   taagtactaagtaagtactaataagagaagagatataacttattgaaaaaacatagttcttgaaaatcataaaccagttacaagagaagtaacaacaata  10675800                           --------->WOX13(1)                         --------->ICU4                         <---------ATHB12                    --------->YAB1                     <---------ARR11(3)                 -------->HAHB4                    <---------bZIP60(1)                 <---------ICU4                    --------->bZIP60(1)            ====================================HOX2a_HOX2a           <------ZmHOX2a(2)                    ----------->HVH21                   <---------DOF5.7(2)           =====================================HOX2a_HOX2a                        <---------WRKY12          --------->ARR11(3)                  ----------->GT1                      <---------WRKY45--          <---------ARR11(3)              <---------ARR14(2)                       <---------WRKY38(1) ---------->DOF2--------->ICU4           <------ZmHOX2a(1)        <----------DOF2 --------->DOF5.7(2) --------ID1------>ZmHOX2a(2)          <---------TOE2(3)    <XXXXXXXXXXXXXXXXXXXXMIR1887         <---   gggaaaagaagggatctaataatcgaaatcattcaagagttgaggaaactgtgacaacatctcttggtctttatctagtatttcgtcaacgaaggaactc  10675900                                                                                             --------                                                                                           <---------bZIP60(1)                                                                                           <---------bZIP60(2)                                                                                           --------->bZIP60(1)                  ------>NtERF2                                                           <---------AtMYB61               --------->LBD16                                                            --------->MYB59             <---------HSFB2a(2)                                                     --------->DAG2   ----------->HVH21 <----------DOF2                                          <---------ANAC46 ------->LBD16--------->LBD16                                           <-------TEIL---------->DOF2 ------LBD16 --------->HSFB2a(2)              <---------ARR14(2)  --------->ICU4<---------ANAC46   gcggaatgacatgttcccgaggcctttgaatcgatgttttgagagatgtattcggcttcgatgttgaaatgatgttcgttctgcgtaaaagtgaggtcgc  10676000           ------>ZmHOX2a(2)           ====================HOX2a_HOX2a          =====================HOX2a_HOX2a          --------->PCF2          <------ZmHOX2a(2)         <---------ARR11(3)         --------->ARR11(3)    --------->ARR14(2)         <---------ARR14(2)    <-----------HVH21                               <---------------AtSPL8         --------->ARR14(2)    <---------ARR14(2)                              <---------TOE2(3)      <---------TOE2(3)      --------->LBD16                              <---------MYB46(3)  <---------At4g35610      <---------LBD16                              <---------MYB52(1)  --------->At4g35610    <---------ARR14(2)                  ------------>MYB.PH3(2)  --------->ZAT2        <------ZmHOX2a(1)    --------->GLK1(1)     <---------ARR14(2)        <------- ->ZAT18<------ZmHOX2a(1)--------->ARR14(2)  <---------GLK1(1)     <-----------GT1 <-------TEIL   <--   tagtagctgaggatcccactacttgaggaaccgggtccgagagaaggaaatcgctccagtagaagttagtaaccggtgtttgaggtacttggtttggctg  10676100  Previous    Next  AGI:  At3g28460.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN74970.1); contains InterPro domain Protein of unknown function methylase putative (InterPro:IPR016065) Range:  from: 10673278    to: 10675632    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g28470.1    Description:  AtMYB35 (myb domain protein 35); DNA binding / transcription factor. similar to ATMYB103/ATMYB80/MS188/MYB103 (MYB DOMAIN PROTEIN 80), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G56110.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14855.1); contains InterPro domain Myb transcription factor (InterPro:IPR015495); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778) Range:  from: 10675745    to: 10676961    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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