Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            <---------HSFB2a(2)                                          <---------HSFC1(1)                                        -      ----------->GT1                     --------->HSFB2a(2)   ------>NtERF2                       <     --------->ANAC58               <---------AHL20(2)         <---------ZAT18                 <xxxxx     --------->ANAC58              --------->AHL20(2)          --------->ZAT18                 ------ ----------ID1                     <---------AHL20(2)         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)<--- ----HSFB2a(2)            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)<---------ANAC46               ------->TEIL --->HSFB2a(2)           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<---------At4g35610    <-------TEIL<---- ----HSFC1(1)         <-----------GT1 <---------GLK1(2)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)<xxxxx --->HSFC1(1)  <-----------GT1 <---------AHL20(2)         ---------->DOF2   ----------->GT1<---------ZAT14   gagcgacaaggaaaaattcacaagtttccctatatttttaaattctcgaactgcaaatgttatagcggacaatttgataagaaaaattcatactgaaccg  10668100                          <---------AHL20(2)                      --------->AHL20(2)                      <---------AHL20(2)                     --------->AHL20(1)                     --------->AHL20(2)                                                             <                  --------->AHL20(2)                                                              ---                  --------->AHL20(1)                                                              ---                  <---------AHL20(2)                                                              <--                 <---------AHL20(2)                                                              <---                 <---------ATHB51                                                             -------       <---------ANAC55(2)--------->AHL20(2)                                             --------->LBD16 -------->ANAC55(2)  <---------AHL20(2)                                              --------->ARR14(2) ---------ANAC55(2)  <---------AHL20(1)                                              <---------ARR14(2) xxxxxxxxxxxxxxxxxxsmallRNA(si3)                                 --------->YAB1     <---------GLK1(1) ----->GT1  ----------->GT1                   <----------DOF2   <---------YAB1  <-----------GT1  ---- ------MYB52(1)  --------->AHL20(2)  <----------DOF2    --------->AHL20(2)   ----------->GT1  <------ -------HVH21    --------->ICU4     <---------ANAC58    <---------AHL20(2)  --------->DAG2    ------- xxxxxxxxxxxxxxxxxsmallRNA(le3)     <---------ANAC58   --------->AHL20(2)  ---------->DOF2   --------   ttacatattacatatggaaataatttatttaaaaattggcttttctaacttttaaaaaaaaatttgatgataaaaaaaaaagttacaaatccgaaattaa  10668200       ---------->DOF2 ---------YAB1 ----->HAHB4 ------>YAB1                                                                                     <--- -------ICU4                                                                                    ----- ------ATHB51                    --------->YAB1                                                <----- -->AHL20(1)                  --------->YAB1                                           <----------ID1 ----->ICU4             --------->YAB1                 ------>ZmHOX2a(2)        ----------->GT1------ ---AHL20(2)         --------->LBD16  --------->ICU4 <---------ARR11(3)        <---------TOE2(3)<---- -->AHL20(2)   <---------------AtSPL8 <---------YAB1 --------->ARR11(3)        <---------TOE1(3)<---- ->AHL20(2) ---------->DOF2--------->YAB1   ----------->GT1             <---------WRKY12       ------   ttatgaagaaaaagaaaagagtccgaaaataatcaacataatgtttatgtaaaatgatctatctataagataagtcaacttaaggtaaaaaaacaaatta  10668300 ------YAB1                                                  --------->ATHB12 ---->AHL20(1)                                               --------->YAB1         <----------DOF2 ----AHL20(2)                                                <--------ATHB1        <---------ANAC58 --->AHL20(2)                                               <---------YAB1         <---------ANAC58 -----AHL20(2)              ---------->DOF2                 <---------ATHB12<---------YAB1 -----AHL20(1)           --------->AHL20(2)                 --------->ICU4--------->YAB1 --->YAB1  --------->MYB46(3)                  ---------->DOF2         ----------->GT1       <-------   tatttcaaatcgaacaaactagtcgaataaaaaagaaattcaactacaaaaaagactagacaatgatggaattttgttataatttgctttgaaaacttta  10668400                        --------->ATHB51                        <---------ICU4                        --------->YAB1                        <--------ATHB1                        <--------HAHB4                        -------->HAHB4                       <---------ATHB51                       --------->ICU4                       <---------YAB1                     --------->YAB1                                                  --------->ANAC58                    <---------YAB1                                                   --------->O2                    --------->ICU4                                                   --------->TGA1a                  --------->YAB1                                                     --------->ANAC58                  <---------ICU4                                                     <---------TGA1a                 <---------YAB1                                                      <---------O2               --------->YAB1                                            ------>NtERF2               <---------ICU4                                           --------->DEAR3(1)              <---------YAB1                                            ----------->HVH21          *TSS              --------->ICU4                                     <---------ANAC58    --------->ANAC46            --------->YAB1 <---------AHL20(2)         <---------ZAT14   --------->MYB46(3)      -----           <---------YAB1  --------->AHL20(2)     ------>NtERF2  <---------ANAC58    <---------ANAC55(2)      <-----------GT1<---------ICU4  <---------bZIP60(1)        <---------ICU4       ================   <---------ICU4--------->ICU4      --------->bZIP60(1)       <---------YAB1        --------->ANAC55(1) ---DOF2<---------YAB1 --------->AHL20(2)---------->DOF2     --------->YAB1        <---------ALFIN1<-   cttaaaaattactataataataataataattaaaaaatgacatcaaagtcgacgactactctataatccttgcgacgaccgttcaacacgtctgacttac  10668500                                          <---------AHL20(2)                                        <----------DOF2                                        --------->TOE2(3)                                     --------->GLK1(2)                            <---------ARR14(2)                            --------->ARR14(2)                           --------->At4g35610                   --------->ATHB12  <---------ARR11(3)                  <---------YAB1 --------->ANAC46 ---->ANAC55(2)<----------DOF2<-------TEIL--------->AHL20(2)                                   ------ =========================bZIP_DOF   --------->ARR11(3)      --------->LBD16                 -------- -----------CBF<---------DAG2--------->CCA1(2) --------->TOE2(3)    -------->P   --------->bZIP60(2)<   atattgtctctctgcaacttttcattggcagatacacaaaatctttaattcttaatccaaacccagaaacaacctctgaaaccacttcatcatccatgaa  10668600                                                                                        ----------->RAV1(1)                                                                                       --------->ANAC46                                                                                       --------->ANAC58                                                                               --------->At4g35610     --------->At4g35610      <----------DOF2                                  <---------At4g35610   ------>ZmHOX2a(2)          <---------DAG2                                 =======================RAV  <------ZmHOX2a(2)          --------->TOE2(3)                               <-----------RAV1(2) --------->ARR14(2)    <-----------GT1                                      <------NtERF2 <---------ARR14(2) ----------->GT1                                         --------->At4g35610 ---->DOF2      --------->ANAC58            --------->At4g35610 ------>ZmHOX2a(1)      <----------ID1 ->AtLEC2       --------->ANAC58       --------->REM1(1)    ---------->ID1  <---------At4g35610 ---------GLK1(1) ---------->DOF2 <---------YAB1  ------>ZmHOX2a(1) <---------MYB52(1) --------->ANAC58   agagatcggctcaaaaccaagaaagttacttcctttatgcttcatcatcttcctctgtttttgttcctctgttatggctgcagatgaagacgacataaga  10668700                                  ---------->DOF2                                ------>ZmHOX2a(1)                               --------->TOE2(3)                              ------>ZmHOX2a(2)                             xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                             <------ZmHOX2a(2)                            <---------GLK1(2)                            --------->ARR11(3)                            --------->AGP1                            <---------ARR14(2)                                                    <--                      ----------->HVH21                                       <---------GLK1(1)   <--                  <---------CCA1(2)                                         <---------ANAC58      <--            ---------->DOF2 --------->ARR14(2)                              <---------ANAC58    <----       <------ZmHOX2a(1)    <---------ARR11(3)              --------->HSFB2a(2)                 <----       ==============================HOX2a_HOX2a<---------ATHB12           <---------TOE1(2)   <-----       =============================HOX2a_HOX2a --------->ICU4 ----------->RAV1(1)            <------   tgcttaagaggactcaaagcatctctcacagatcctcaaaacgcgttgaaatcatggaacttcgacaacacaactcttgggtttctctgtaacttcgttg  10668800   <---------ANAC46   <---------ANAC58   <---------ANAC58     <---------ARR14(2) -------ANAC58      <------ZmHOX2a(1) -------ANAC58   --------->YAB1               <-------TEIL                     --------->GLK1(2) -------ANAC46   <-----------RAV1(2)       --------->At4g35610                --------->ARR14(2) --MYB83        <---------ATHB12           <---------At4g35610                <---------GLK1(2) --MYB46(1)   --------->WOX13(1)      --------->YAB1--------->CCA1(2)         <---------ARR14(2) ----AtMYB61 --------->MYB46(3)    --------->WOX13(1)                       <---------TOE1(2) ---MYB52(1)<---------KAN4(2)    <---------YAB1<---------ANAC46  ----------->GT1   gtgtgtcttgttggaacaatcaggagaatagggttatcaatcttgagcttcgtgatatgggtttatctggtaaaatcccagattctcttcaatactgtgc  10668900                                                                       <---------DAG2                                                                       --------------->AGL15                                                                       <---------------AGL15                                                                      ----------------->AGL2                                                                      <-----------------AGL2                                                                      <-----------------AGL3                                                                      ----------------->AGL3                                                                      ----------------->AG                                                                      <-----------------AGL1                                                 <---------ZAT14      ----------------->AGL1                     --------->HSFB2a(2)         --------->ZAT14      <-----------------AG                     <---------HSFB2a(2)   --------->ARR11(3)       <-----------GT1                 <----------DOF2           <-----------GT1<---------ANAC46                ------>ZmHOX2a(2)          <---------ARR11(3)    <---------MYB46(3)              <---------ARR11(3)         ---------->TaMYB80    <---------WOX13(1)              --------->ARR11(3)     ----------->GT1    <---------ANAC46<----------DOF2 --------->ATHB12   gagtttacaaaaacttgatctttctagtaatcgattgtctggtaatatccctacagagttgtgtaattggttaccttttttggtatctcttgatttgtca  10669000  Previous    Next  AGI:  At3g28450.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT1G27190.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14859.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat, N-terminal (InterPro:IPR013210); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) Range:  from: 10668499    to: 10670614    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version