Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      =                                                                             ---------->DOF2        <   --------->RAP2.6(2)                                                     ==========================   ----------->RAV1(1)                                               --------->DAG2               <-- -------->ANAC46           ----------->GT1                         ---------->DOF2  ----------->RAV1(2) --->GLK1(2)         ---------->DOF2----------->GT1                --------->MYB52(1)--------->TOE2(2) ------ARR10     ------->TEIL      ----------->GT1        ----------->GT1  <------ZmHOX2a(2)  <------   ctcagccacaattcaaatgaaccaaaagagagataaatcggaaaaaaaaactgaaacttgttgtaaaaccaaaggcgatcaaagaaacctgagttcggct  10663600                                             --------->AHL20(2)                                        <---------WOX13(1)            <---------LBD16           --------->ATHB12         <---------HSFB2a(1)          ------>ZmHOX2a(2)          --------->ICU4            --------->HSFC1(2)                   <         <---------GLK1(1)           <---------YAB1            <---------HSFC1(2)          ------>ZmHOX2a(1)    --------->GLK1(2)              --------->O2              ---------->DOF2              --------->TOE2(3) ================HOX2a_HOX2a     ----------->RAV1(1)    ------>ZmHOX2a(1)            =============HOX2a_HOX2a ------ZmHOX2a(1)             --------->ANAC58          ====================================HOX2a_HOX2a ======HOX2a_HOX2a            --------->ANAC58     --------->WOX13(1)                <------ZmHOX2a(2) -------TOE2(3)              --------->GLK1(1)   <---------ATHB12               <---------LBD16     - ---At4g35610               ---------->DOF2  <---------AHL20(2)--------->HSFB2a(1)  <---------ARR11(3)   aaggagaatcgatctctgggtcttaagaaggaaagccacatgattgtttaaatcaatcctttggaaagttccagtcttcttctctggatcatccttcact  10663700                        <---------ANAC58                                   --------->LBD16                        <---------ANAC58                                   <---------LBD16                   --------->ATHB12                                       <---------LBD16                   <---------ICU4                               <---------ARR11(3)     --------->YAB1                  --------->ICU4                            --------->ANAC58         <---------ARR11(3)                  <---------YAB1           ------>MYB83  ----------->HVH21--------->TOE1(2) ---------HSFB2a(2)--------->ATHB51        ------>MYB46(1)  --------->ANAC58    <------ZmHOX2a(2) -------->HSFB2a(2)-------->ATHB1     <-----------GT1    ----------->TGA1------>ZmHOX2a(2)   ctcgagaaaacccaatttccattattgcttctcgtcgattaaaccaaattccacaaactctgacgaaatctctgatccagggatcaaaatcatacaaaat  10663800                                                                      --------->MYB52(1)      <------                                                                      ----------->RAV1(1)     <------                                                               --------->At5g28300     <------NtERF2                                                              --------->LBD16        <---------bZIP60(1)                                           <---------WOX13(1) ----------->GT1       --------->RAP2.6(3)                                         <--------ATHB1      <---------HSFB2a(2)  ----------->HVH21                      --------->DAG2     --------->ATHB12    --------->HSFB2a(2)  ----------->TGA1              ----------->GT1           --------->ICU4      <---------LBD16   <---------WOX13(1)    =      <---------CCA1(2)                 <---------ATHB12 <---------ANAC58------->GAMYB------>NtERF2 -  ----------->GT1    ---------->DOF2    <---------YAB1   <---------ANAC58============================   caaatcgtatatcgaggggaataaaaagttcgaatttttcgaatgattgtttagatgtttcttccggtaaaacaacagagattgatgacggcaattgcga  10663900                           <---------ANAC58                  ----------->GT1                      --------->At4g35610                  <---------ANAC46                      --------->ZAT2                   --------->LBD16               <---------ANAC58                      ------>ZmHOX2a(2)               <-------GAMYB                         <---------LBD16            --------->ALFIN1           <---------GLK1(2) <---------ARR14(2)          =============MYC_MYB   <---------ARR14(2) <------ZmHOX2a(2)                  --------->ARR11(3)       --------->DEAR3(1)  <---------ANAC58        <---------ARR14(2)                  <---------ARR14(2)   --------->MYB46(3) <---------At4g35610    <---------ARR14(2)                        --------->GLK1(2) ---ANAC58<---------TGA1a <------NtERF2<---------ARR14(2)--------->ARR14(2)            <---------ARR11(3) ---ANAC58<---------O2<---------ZAT2   --------->ARR14(2)<-----------HVH21             --------->ARR14(2) ===================bZIP_DOF<-------GAMYB    <---------GLK1(2)                        <---------GLK1(2) --------->DOF2<---------ANAC58  --------->ARR14(2)--------->ARR14(2)             ---------->DOF2 ===================MYC_MYB<---------ANAC46  --------->ARR14(2) <-------TEIL  ---------->DOF2     ---   attgaagcaccgatgtgggttgagagctggcgttggatttggattcggattcggatccgggtcgggttcaatctcgaattcaaagaaagaatcttcaatt  10664000                  --------->AHL20(2)    ------>ZmHOX2a(2)    <-------TEIL  <---------AHL20(2)                                                        <--------   *TSS  <----------DOF2   <---------AHL20(2)                                           ------------>CBF   <------ZmHOX2a(2)   --------->AHL20(2)                                               <---------YAB1  <---------ARR11(3)   <---------AHL20(2)               --------->PCF2                --------->YAB1  --------->ARR11(3)  <---------AHL20(1)          <---------O2                   <---------HSFB2a(2)  --------->ARR14(2)  <---------AHL20(2)      <-----------GT1               <---------HSFC1(2)  <---------ARR14(2)  --------->AHL20(2) <---------AHL20(2)                 --------->HSFC1(2) ------->DOF2    --------->AHL20(2)      --------->AHL20(2)   ----------->HVH21  --------->HSFB2a(2)   gaaagatccgtctttcgcatttaatttaatttaaggggaacatttatttttcacgttggaccctctgactagagaagaggcttctcgataatcaatgact  10664100                   --------->ICU4         <-----------TGA1         <-----------HVH21        --------->O2        <---------O2        --------->bZIP60(1)        <---------TGA1a        =============================================MYC_MYB        --------->bZIP60(2)        <---------bZIP60(1)        --------->ANAC58        --------->TGA1a        --------->ANAC46        --------->ANAC55(2)        --------->ANAC58       <-----------STF1                                 <<<<<<<<<<<<<<<<<LFY      <---------ALFIN1                               <---------ICU4    <-----------HVH21                                --------->YAB1   ------->GAMYB   <---------YAB1                   --------->ICU4                             ------   ===============MYC_MYB                           <---------YAB1                             <-----  <------------AtMYB77                           <---------YAB1                               -------  ================MYC_MYB                     ---------->ID1                                  <------  --------->MYB46(3)   --------->AHL20(2)     <XXXXXXXXXXXXXXXXXXXXMIR3932A/B                 <------ <---------At4g35610  <---------YAB1         <-------GAMYB                              --------->YAB1 --------->At4g35610<---------ICU4          --------->MYB52(2)                     <---------YAB1 -ATHB12<---------ANAC55(2)<-----------GT1  <---------MYB46(3)            <---------ARR14(2)  -------   cacaactgccacgtcatacacattattatttacaaaactaaattgtttgttgtcattataacattggtgatttgcagaaatgaccatgtttgataattta  10664200                                                                                                   --                                                                                              <------                                                                                           ------->MYC3                                                                                           <-------MYC3 <---------TOE2(3)                                               <-----------GT1           <-------MYC2 --->AHL20(2)                                                 --------->ANAC55(2)          ------->MYC2 ----AHL20(2)                 ----------->GT1                 <---------ANAC55(2)         --------->ANAC46 -->AHL20(1)       --------->AHL20(1)                        --------->MYB59              --------->ANAC58 ---AHL20(1)       <---------AHL20(1)                    ----------->GT1         --------->TOE1(2) == ---AHL20(2)  --------->AHL20(2)       --------->ZAT6   --------->DAG2      --------->AHL20(2)------- -->AHL20(2)  <---------AHL20(2)--------->AHL20(2)     ---------->DOF2 ------>ZmHOX2a(1)  --------->ANAC58   tttaagaatatagcattttaatatataaaactaagtaaataacactagagagggatgaaaagttaagtaactcctcattaaaacatgagaacacgcgcgt  10664300                         ----------->HVH21                      ------>ZmHOX2a(2)                     <---------YAB1                    <---------ARR11(3)                  ----------->HVH21                ===================================================bZIP_DOF                <---------ANAC55(1)                ============================bZIP_DOF                <---------ANAC46                ===================================bZIP_DOF                <---------ANAC58                --------->ANAC55(2)                <---------ANAC55(2)                <---------TGA2(1)                <---------TGA1a                --------->TGA1a                                                         <---------ANAC46                <---------O2                                                         <---------DEAR3(1)                --------->O2                                                 <---------ANAC58                <---------ANAC58                                             <---------ANAC58                --------->bZIP60(1)                                          <---------ANAC46                <---------bZIP60(2)                                <-----------RAV1(1) <------NtERF2                <---------bZIP60(1)                                --------->ALFIN1<---------MYB46(3) -------->DOF2 ----------->STF1                                 --------->DAG2    <---------AtMYB61 ---ANAC46   ----------->TGA1                                  ---------->DOF2 ----------->HVH21 =========================bZIP_DOF      <----------DOF2 ---------->DOF2  <---------ANAC58           - ---->GT1    ----------->HVH21   <----------DOF2       --------->AHL20(2)<---------ANAC58           <   gaaaagagaagaagagtgacgtgatccttgacactcttttcggtttatggacataaataaaagagaaaagtgttggctagcgtgatggtggcgaagatgg  10664400                                                           <------NtERF2                                                          ------>NtERF2                                                          --------->ABI4(2)                                                         --------->ALFIN1                                                        <------NtERF2                                                        --------->ATERF1(1)                                                       <---------DEAR4(2)                                                       <---------RAP2.3(1)                                                       <---------ERF1                                                       <---------ATERF1(1)                                                       <---------ORA47(2)                                                       <---------DEAR3(2)                                                      <---------ANAC58                                                      <---------ANAC46                                                      <---------ANAC58                      <------NtERF2                                                      <---------DEAR3(1)                   --------->ABI4(2)                                                      <---------DREB2C(2)               <---------DEAR3(2)                                                   --------->ALFIN1         --------->YAB1 ------>NtERF2                                               <---------ZAT14             --------->ICU4 --------->ALFIN1          ----------->GT1                     ----------->RAV1(1)          <---------YAB1--------->ATERF1(1)          --------->YAB1                  <---------bZIP60(1)        --------->ICU4     <---------ATERF1(1) --------->YAB1    --------->YAB1         --------->bZIP60(1)   --------->YAB1      --------->DEAR3(1) -------->ICU4  <---------ICU4         ----------->TGA1<---------MYB46(3)--------->YAB1<---------DEAR3(1) ---------YAB1 --------->ICU4       <---------AtMYB61<---------ABI4(1)--------->YAB1----------->HVH21   cgatgatggtaatagtaacaatgacagtaccgatggtgatggtgacgacaacagtggcggtgccgatggtaatagtgatgataacagcgacggtgccgat  10664500  Previous    Next  AGI:  At3g28430.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO69571.1); similar to Os04g0298600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052403.1); contains domain PTHR21481 (PTHR21481) Range:  from: 10658268    to: 10664003    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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