Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             --------->GLK1(2)                    <----                                                         --------->HSFB2a(1)                 --------                                                         <---------HSFB2a(1)                <-------- -------->REM1(1)                       >>>>>>>>>>>>>>>>>LFY     --------->YAB1       <---------ANAC46 -->DOF2      <---------TOE2(3)----------->GT1     ---------->DOF2---------->DOF2    ---------->ID1--   ctacaacgttctgtttaagaaaaaaaaaacattttgttaaatagccaatgtgcaaaagaaaattctataaaagttttttttttttttgtcgtctattata  10629000                                                               =====================HOX2a_HOX2a                                                              --------->CCA1(2)                                                              ======================HOX2a_HOX2a                                                              <------ZmHOX2a(2)                                                             --------->ARR11(3)                                                             --------->AGP1                                                             --------->ARR14(2)                                                             <---------AGP1                                                             <---------ARR11(3)                                                   <---------AHL20(2)         <---------ANAC55(2)                      --------->AHL20(2)         ------>ZmHOX2a(1)         --------->ANAC55(2)      <---------MYB46(3)         <---------ARR14(2)      --------->ARR11(3)      <-----------RAV1(1) --------->YAB1        <---------GLK1(1) -------GT1               <---------AHL20(2)  <---------AHL20(2)  <---------AtLEC2 ->YAB1--------->CCA1(2)  --------->AHL20(2)  --------->AHL20(2)<---------HSFB2a(2) -YAB1<---------ARR11(3) --------->YAB1      --------->AHL20(2)------>ZmHOX2a(2) ------->TOE2(3)      ------>ZmHOX2a(1)   --------->ICU4 <-----------------AGL2   acattagagatatgtattctaatcctattaaaatgttggatgtgatatttaataaaaatgctagatctggatggacatcctgatgaaaaaaacaataggg  10629100                          <------MYB83                         ----------->GT1                          <------MYB46(1)                     --------->ANAC58                --------->ANAC58                              --------->ANAC58                --------->ANAC58                          ------------------------>ANAC81              <---------ICU4     <----------DOF2          --------->ANAC58           --------->YAB1<---------TOE1(2)                --------->ANAC58                      -----         --------->ANAC58<---------TOE2(2)               --------->DAG2                         <----         --------->ANAC58--------->MYB111(1)       --------------->AGL15          ---------->DOF2   --------->ARR11(3)    --------->MYB59           ---------->DOF2         ----------->GT1      <----   <---------ARR11(3)   <--------P  <-----------HVH21   ---------->DOF2 --------->MYB52(1)      -----   cctaagatgttaagcatcatgccatggtaggtttactttgtcatatcgacttacaaagaaaagcaaggaaaaaaaaacagaaaataaagaccatagaaga  10629200                                                                                             <-------                                                                                       <------ZmHOX2a(1)                                                                                    <-----------RAV1(2)                                                                                  ----------->RAV1(1)                           --------->ATHB12        <---------MYB46(3)            --------->ANAC58             <---------AtLEC2                     <--------P                     --------->ANAC58 ---->ARR14(3)             --------->ATHB51   ------>NtERF2     <-------GAMYB --------->TOE2(2) -----ARR11(3)            <---------YAB1     <---------ANAC46  --------->ALFIN1  --------->ANAC46 -----ARR14(3)    <---------TOE1(3)       --------->ALFIN1   <---------ANAC46 --------->TOE1(2) ----- ---->ARR11(3)    <---------TOE2(3)   <------ZmHOX2a(1)     <-----------------------TaNAC69(2)  -----   ccttggagatggtttgcatgaaggttttattattggaagaggaagtgccgaggttgttcagtagtgtgttgaagatgaaaactacgacaggagtgatgaa  10629300                                                            <---------AtLEC2        --------->MYB46(3)                                --------->ANAC58       ------>MYB46(1)                                    --------->ANAC58       ------>MYB83                                    <------NtERF2      --------->MYB52(1)                             --------->SPL7     --------->MYB46(3)                            --------->ORA47(1)     --------->AtMYB61                             <---------SPL7                  --------->HSFB2a(2)    --------->MYB46(3)                         --------->ANAC46          ------>ZmHOX2a(2) --REM1(1)                                     <---------ALFIN1  ------->TEIL      <---------HSFB2a(2) ---->ANAC58     <---------ATHB12    <---------ARR11(3)--------->LBD16 --------->ARR11(3) ---->ANAC58------>NtERF2       <---------ATHB12  --------->DEAR3(1)   <---------ARR11(3)           -   gccatcaccaacggctccaattaagcctaatgccatcaatatccaatctacaccgtccgcatgcatgaatatcgatcttatacttccaaaactcttcatc  10629400                                                                                 <---------WRKY18(1)                                                                                ----------->HVH21                                                                                --------->WRKY12                                                                                --------->WRKY38(1)                                                                              <------------CBF-------                            <-----------GT1                                --------->ANAC58   <------       <---------ALFIN1   <----------DOF2<----------DOF2           --------->AtMYB61 <----------DOF2 --------->ID1<----------DOF2       <---------ARR11(3) ---------->DOF2     --------->ANAC58   -------   ttgtccctcccactctctttttcatcttctttacccattatctcttttgtttagagagaaagagagagaccaaaacgacgcattgacctttgggaaacga  10629500                                                                                                   <-                        <-----------HVH21                                                         ---                       <------NtERF2           --------->AHL20(2)                          <---------ANAC55(2)                       ----------->HVH21     <----------DOF2                               <---------ANAC55(1)                      --------->LBD16------>ZmHOX2a(2)                                     <---------ANAC58                    <---------LBD16 <------ZmHOX2a(2)                         <------------CBF    <--                   --------->ZAT2  <---------ARR11(3)                      <<<<<<<<<<<<<<<<<LFY -----                   --------->At4g35610<---------SPL7              ----------->GT1          <---------ANAC46 -->ANAC58         <---------ZAT2 --------->GLK1(1)               <---------TOE2(3)        --------->ANAC55(2) ----ID1        <---------At4g35610--------->ARR11(3)<---------ANAC55(2)--------->YAB1     <---------ANAC58 -->ANAC58<-----------TBP         <---------GLK1(1)  <---------YAB1    <---------YAB1------------>CBF   caaactacagttttatatagcagccgggacagagggagatcgtaggccttttattatgtatgaaaattaagttattataacattggtatcaatacgtgaa  10629600                                                                             <------MYB83                                                                             <------MYB46(1)                                                                       --------->AHL20(2)               --------->ZAT14                                         <---------AHL20(2)     <---------TOE2(3)                                        --------->AHL20(2)   --------->AHL20(2)                  <---------AHL20(2)     <---------AHL20(2)   <---------AHL20(2)                  --------->AHL20(1)    --------->AHL20(2)  <---------YAB1                       <---------AHL20(1)    <---------AHL20(1) --------YAB1  <---------ZAT14      --------->AHL20(1)       <---------AHL20(2) ------>ARR11(3)                    --------->AHL20(2)   <---------AHL20(2) --------->MYB59         - -------ARR11(3)    ---------->DOF2 <---------AHL20(2)----------->GT1 <---------AHL20(2)     <------- ------>GT1   <---------ZAT6 --------->YAB1       <------------CBF    --------->AHL20(2)    ---------   gataattaatgtactagtgtagaaaagtttagcataaataaaatatttctagcattgagttaatttttttaaaaaaatttggtcataacaaaaatatgtt  10629700                                                       --------->ANAC58                                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                 <-----------HVH21                                                 <-----------TGA1                                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                           <---------ALFIN1                                          ------>MYB83 --------->ANAC58                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                          ------>MYB46(1)            xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                         ----------->RAV1(1)     <---------AHL20(2)                                        --------->AtMYB61 <-------TEIL                                       --------->MYB46(3) ------->TEIL                       <xxxxxxx                                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)             --------->ANAC58                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                --------->ANAC46                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)          --------->At4g35610                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)          <---------At4g35610                               ----------->GT1 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)     --------->ANAC58 -------->CCA1(2)           --------->ANAC58   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)   --------->REM1(1) --YAB1                     --------->ANAC58 <xxxxxxxxxxxxxxxxsmallRNA(i)      <---------MYB52(1)  -- >AHL20(1)   ----------->GT1--------->ANAC46<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)--------->MYB52(2)<-   agatttgagagaaaaatgtttattagttacacgaagtataaaccaacacatcgtcacacgtacatattttaaaaatgtctcgttagctacacgaagtatt  10629800                                                                                <---------WRKY18(1)                                                                          --------->LBD16                                                                  ----------------->AGL2                                                                  ----------------->AGL1 --------->WRKY38(1)                                                               --------->WRKY12--------->WRKY38(1)                                                               --------->WRKY38(1)     --------->ZAT14                                                               --------->WRKY45--------->WRKY45                                                          xxxxxxxxxxxxxxxx>smallRNA(s)<---------ZAT6                                                          ------>ZmHOX2a(1)    --------->WRKY12                          --------->YAB1             <---------ICU4   --------->ARR14(2) ----------->HVH21                      --------->MYB46(3)             --------->YAB1   <---------ARR14(2) --------->WRKY12                  --------->ANAC58                <---------ICU4  <-----------------AGL1 --------->WRKY45               <-------TEIL                       --------->YAB1<---------WRKY18(1) xxxxxxxxxxxxxxxx>smallRNA(s) xxxxxxxxxxxxxxxxsmallRNA(i2)               <xxxxxxxxxxxxxxxxsmallRNA(i)--------->DEAR3(2)<---------WRKY18(1) ------->bZIP60(1)--------->ANAC58          <---------ALFIN1 <----------DOF2   ----------->HVH21 --------GLK1(1)  --------->ANAC46 <-----------RAV1(1)    xxxxxxxxxxxxxxxx>smallRNA(i)--------->ALFIN1   gatatcacatacggacatacacgaacaaacataagtcatgttgccaacaccataatcatcctactttgaccagaaccggcattgaccagtgttgaccggt  10629900  Previous    Next  AGI:  At3g28380.1    Description:  PGP17 (P-GLYCOPROTEIN 17); ATP binding / ATPase/ ATPase, coupled to transmembrane movement of substances / nucleoside-triphosphatase/ nucleotide binding. Identical to Putative multidrug resistance protein 19 (MDR19) [Arabidopsis Thaliana] (GB:Q9LSJ6); similar to ABC transporter family protein [Arabidopsis thaliana] (TAIR:AT3G28345.1); similar to PGP18 (P-GLYCOPROTEIN 18), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT3G28390.1); similar to P-glycoprotein, putative [Arabidopsis thaliana] (TAIR:AT3G28415.1); similar to Cyclic peptide transporter [Medicago truncatula] (GB:ABD33400.2); similar to hypothet Range:  from: 10624979    to: 10629438    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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