Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     --                                                                                                 <---                                                                                          <---------ANAC58              --------->LBD16     <---------YAB1              <---------REM1(2)           <---------ANAC58      --------->TOE2(3)         --------->YAB1     >>>>>>>>>ARR2                         <---------At4g35610    <-------TEIL   ==============HOX2a_HOX2a       >>>>>>>>>ARR1                         --------->At4g35610    --------->SPL7 <------ZmHOX2a(2)             <---------YAB1      ----------->RAV1(1)------->TEIL --------------->SPL14    <------ZmHOX2a(1)   --------->TOE2(2)  --------->ANAC46------>MYB46(1) ---- -RAP2.3(3)  <---------LBD16   --------->ICU4 --------->TOE1(2)<---------ALFIN1  ------>MYB83 <------   cgtccgtacattagtccagggatcaagaggagaatgatgaatgggaagcctacgattgtgagtctccacagcaacatgaaacccactatgtagcttccga  10615800             --------->YAB1                                                            --------->YAB1        <-------TEIL                                                                  --------->AHL20(2)     --------->At4g35610  <------MYB83                  --------->AHL20(2)        <---------YAB1     <---------At4g35610  <------MYB46(1)               <---------AHL20(2)      --------->YAB1 ------->MYB52(1)        --------->MYB46(2)             --------->AHL20(1)      ----------->GT1 ------MYB52(2)       --------->ATHB12                 --------->AHL20(2)      <---------YAB1 ----->MYB46(3) --------->YAB1                  --------->YAB1          --------->ANAC58 ---ETT(1)  <-------TEIL --------->MYB59      <---------ARR11(3)        --------->ANAC58            <   caaacgcagatgcattcatcaaaatgtttggtaactgtttgaattcaaaatcatcaaaaaaattgtttaagaacaagaaatatgataaataaaaattgaa  10615900                                                                                                -----                                                                                                <----                                                                                               <-----                                                                                               <-----                                                      <---------ICU4              <------ZmHOX2a(2)                                                ----------->GT1                  <---------ARR11(3)                       ----------->HVH21        --------->YAB1     <---------ANAC58          <-------            <------ZmHOX2a(1)      --------->ZAT6     --------->YAB1   ----------->HVH21    ------->GAMYB          <---------TOE2(3)      <-----------HVH21    --------->AHL20(2)         --------->ARR11(3) ---------DAG2        <---------WOX13(1)  <<<<<<<<<<<<<<<<<LFY     <---------ANAC58 ---------->DOF2   aaccttttcactgaggaagtcttgaatgacaaggctgtcactagagacactggtaataatatcagaagtgcttgtgacatgaagatcaaagtaacccaca  10616000                                                      =========================RAV                                               <---------CCA1(2)                                           <---------ANAC46              --------->ARR14(2)        --------->ZAT6                     <---------ANAC58              <---------ARR14(2) ---->ARR11(3)           <----------DOF2   <---------ANAC58        ----------->RAV1(1) -----ARR11(3)          <---------DAG2 <---------At4g35610  <---------ANAC58         --------->AHL20(2) ----CCA1(2)          ------->TEIL    <-----------RAV1(1)   <---------ANAC58 ------>ZmHOX2a(1) ----ALFIN1 <---------ZAT14           ============================RAV    <---------ARR11(3) --ALFIN1   --------->ZAT14        <---------ICU4     ----------->RAV1(2)--------->ARR11(3)   <------   tcttgtcttaacactgctcttaagtacctttctctcatttttgctgcttgtctctcccctgttcttgtccaacaatatccttctgttttaaatattaaac  10616100                                                <---------AHL20(1)                                                --------->AHL20(2)                                              <---------TOE2(3)                                            <---------AHL20(2)                                            --------->AHL20(2)                                         ------>MYB46(1)                                         ------>MYB83                                      --------->ANAC58                                   <-------TEIL <---------AHL20(2)  --------->AHL20(2)                                   --------->ZAT18  <---------AHL20(2)                                   <---------ZAT18 --------->AHL20(2)                         <---------AHL20(2)--------->AHL20(2)       --------->AHL20(1)          --------->AHL20(2)      --------->ALFIN1 <---------AHL20(2)     ---------->DOF2   ---------    --------->ANAC46 ----------->GT1  --------->ANAC58              <---------AHL20(2)      --------- -----GT1 <---------AHL20(2)   <---------TOE2(3)--------->AHL20(1) --------->AHL20(2)   -------->P   ccatccacaaaattaaacaaaatttgttatattgaggtgcaccaaattaatattttaatttgataaaaaaaaaattgaaagaaacacacttaccaaggaa  10616200                    ----------------->AGL3                    ----------------->AGL2                                                <---------ZAT18                  --------->ANAC58                        ----------->GT1             ---------------                  --------->ANAC46                   <-----------GT1         --------->ARR14(2)     --------->ANAC46      --------->DAG2         --------->MYB46(2)         <---------ARR11(3)     --------->ANAC58----------->RAV1(1)          --------->MYB52(2)         <---------ARR14(2)     --------->ANAC58--------------->AGL15        --------->MYB111(1)        --------->ARR11(3)    -- >ANAC58          --------->ANAC58              <---------MYB52(1)---------->DOF2     --------------- >ANAC58     <-------TEIL ---------->DOF2     <---------YAB1----------->GT1----------->ARR10  <------   acatatcacccaagatgcacaagccacataaagcatggctagagcattctgttagttacaacgtgaaaaaaagaaggaagatactatattagtactcttt  10616300                                                                                                  <--                                                                                                  ---       <---------AHL20(2)                                                                      <-----   <---------AHL20(2)                                                                          <-----  <---------ARR11(3)                                                                           ------  --------->AHL20(1)                                                                           ------  <---------AHL20(1)           ------------>CBF                                          --------->ANAC55(2) ----------->TBP           --------->ALFIN1                 <-------MYC3                 <---------ANAC55(2) <---------CCA1(2)       <-----------RAV1(1)                ------->MYC3                 ----------->GT1 >AtSPL8           <---------WOX13(1)                    <---------ALFIN1          <---------YAB1 <-- ---->ZmHOX2a(1)  <------------CBF                  <-----------GT1                <---------TOE1(3) >AtSPL3        <---------AHL20(2)                --------->YAB1      --------->YAB1 --------->ARR11(3) ----DOF2--------->ANAC55(2)  <---------PCF2--------->YAB1 --------->ANAC46        <---------TOE2(3)   cctatatatttaagtaatgtaattgatatgtggggcaatatagtaatcgtaatcttactacacgttgagttatagtaagaagtttaagattatgtaataa  10616400           <-----------GT1 -------AHL20(1) ------>AHL20(1)                                                                               ------ ----AHL20(1)                                                                              --------->DAG2 ----AHL20(2)                                                                             ---------->DOF2 --->AHL20(2)                               <-------TEIL                           <---------AHL20(2) --->AHL20(1)                         <-----------GT1                          <---------AHL20(2) -------AHL20(2)       <------------CBF >>>>>>>>>MYB98                        <---------AHL20(2)   aatatttgggttttcacatttctcttattgctatccctatttaacatacacatatggacatatatgtaagacgatagttttttattttttgaaaaagtca  10616500                                                                                   <---------ANAC58                    --------->GLK1(2)                                              <---------ANAC58                   <---------GLK1(2)                                      ----------->GT1                 <---------TOE2(3)                                       <---------TOE1(3)           --------->AHL20(2)                                         <---------AHL20(2)           <---------AHL20(2)                                      <---------------AGL15           <---------YAB1         <------MYB83                     --------------->AGL15          <--      ------>ZmHOX2a(2)           <------MYB46(1)                 <---------------AGL15        <-----     <------ZmHOX2a(2)         <---------ANAC58                   --------------->AGL15        <-----    <---------ARR14(2)         <---------ANAC58                  ----------------->AGL3 <---------ANAC46    --------->ARR14(2)        --------->ATHB12            <---------YAB1 <---------TOE2(3)     ------ --->YAB1 --------->AHL20(2) <---------YAB1 <-----------HVH21  <-----------GT1   --------->ARR11(3)   taagccgatcgttttaattaagaatcccaccatgcttggtctacttggtcatgtctagttttgattttccattttaaggtaaatttcttggctggaattt  10616600              --------->YAB1              --------->ATHB12              <---------ICU4                         --------->ATHB12              <--------HAHB4                    <---------ZAT18             --------->ICU4                     <---------ZAT14           --------->YAB1                       --------->ZAT14 ---------GT1<---------YAB1                <---------ZAT14                                     ------ ----------AtSPL3                          --------->ZAT14                      --------->AHL20(2) ----------AtSPL8                        --------->ETT(2)         ---------->DOF2      ----------->GT1 --------->AtSPL8  <---------ANAC55(2)   <---------ETT(2)----------->GT1        <---------AHL20(2)<--   gtacaactctctgtcatcattacatgagaaaccacttgttatgtctacagtctactcattggaaaaaaaaaagtctactcatttaaatattgtaatttag  10616700  Previous    Next  AGI:  At3g28360.1    Description:  PGP16 (P-GLYCOPROTEIN 16); ATPase, coupled to transmembrane movement of substances. Identical to Multidrug resistance protein 18 (MDR18) [Arabidopsis Thaliana] (GB:Q9LSJ8;GB:Q8RXD2); similar to PGP18 (P-GLYCOPROTEIN 18), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT3G28390.1); similar to P-glycoprotein, putative [Arabidopsis thaliana] (TAIR:AT3G28415.1); similar to PGP17 (P-GLYCOPROTEIN 17), ATP binding / ATPase/ ATPase, coupled to transmembrane movement of substances / nucleoside-triphosphatase/ nucleotide binding [Arabidopsis thaliana] (TAIR:AT3G28380.1); similar to Cyclic peptide transporter [Medi Range:  from: 10612261    to: 10616236    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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