Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100      ---------->DOF2                             --------->TOE2(3) -------->DAG2                             --------->AHL20(2) -------->DOF2                --------->ANAC46 <---------ICU4 -------->AGL15      <---------MYB52(1)--------->AHL20(2) ---->RAV1(1)      ----------->GT1     <---------AHL20(2) ---------AGL15--------->GLK1(1)    --------->AHL20(2)    --------->ATHB12 --------->AGL3<---------GLK1(1)   --------->AHL20(2) <---------WRKY45   ataaagcaaagctacagaattctgttaattacacaaaataaaaaaataaacattagtcaaagattgaagtatacatgtaaacttgtaagacttgaagaag  10599600                                                                 <---------HSFB2a(2)                                                                 --------->HSFB2a(2)            <---------YAB1                                    --------->GLK1(2)        <-------GAMYB                                        <---------ARR14(2)       <---------MYB46(3)           <------MYB46(1)          --------->ARR14(2)     <---------ANAC58               <---------MYB46(3)   <---------At4g35610     <-------GAMYB              <-----------RAV1(1)     --------->MYB52(1)     <---------ANAC58   <------MYB46(1)                <---------WRKY38(1)            --------->GLK1(2)    <------MYB83        <------MYB83<------MYB83       <---------WRKY12               --------->ARR11(3)    <------MYB46(1)     ----------->GT1              <-----------HVH21   ---------->DOF2<---------ICU4   --------->MYB59  <-----------RAV1(1)     <-----------GT1  <---------GLK1(2)        <---------ARR11(3)   tcaatttggttgttatacttatatgttggtaattttgttggtttattaacaaaattgtcaacggattctggacaacaaagcatccaaaaatcttgacaaa  10599700                                     <---------AHL20(2)                                    <---------AHL20(2)                                    --------->AHL20(2)                             <----------DOF2             <---------------------WRI1                                       <---------At4g35610           ------>ZmHOX2a(2)        --------->YAB1                            <---------GLK1(1)         --------->ARR11(3)  <---------MYB46(3)                         --------->TOE1(2)         <---------ARR11(3)  ----------->GT1       ---------->DOF2     <---------HSFB2a(1)  <--------   --------->AHL20(2)   ---------->DOF2      <------NtERF2            --------->GLK1(2)<---------AtLEC2   aaaaaaaaaatgatctactaagaaaacaaagtggttaattatatggcagagaagaaagagagagagagagagaaccttggagatgctttgcatgaaggta  10599800                                                                                       <------NtERF2                                                                                      ------>NtERF2                                                                                     <---------ARR14(2)                                                                                     --------->ARR14(2)                                                                                    --------->ATERF1(1)                                                                                   <---------ATERF1(1)                                                                                   <---------RAP2.3(1)                                                                                   <---------DEAR3(2)                                                                                   ------>NtERF2                 --------->MYB52(1)                                               <---------DEAR3(1)                <---------ALFIN1                                               --------->DEAR3(1)               <---------MYB55(2)                                              --------->At1g77200               <---------ABI4(2)       <---------ANAC46                        ----------->HVH21             <---------ARR14(2)        <---------ANAC58                   <-----------HVH21     -----             --------->ARR14(2)        <---------ANAC58                  --------->AtMYB61     ------      ---------->DOF2                 <---------ZAT2                    --------->MYB46(3)   <------- <---------ZAT6--------->MYB46(3)  <---------ANAC58              ----------->GT1--------->MYB52(1) -TOE2(3)   <------ZmHOX2a(1)      <---------ANAC58          <------ZmHOX2a(1)--------->DEAR3(2)-----   tcagtgttgaaagaggaaccaccgatgttgttcataagcttgctggtgatgagaagaacaagaggagttgtgaaaccatcaccgacggctccgattaacc  10599900                                  <---------AtLEC2                               <-------MYC3                           <---------DEAR3(1)                           --------->SPL7                         <---------SPL7                         --------->ORA47(1)                     --------->ANAC46                     <---------ALFIN1  ------->TEIL                ------>MYB83   ------->MYC3                ------>MYB46(1)<-------MYC2            --------->ANAC58   <-------PIF5            --------->ANAC58   ------->MYC2           ------->GAMYB <-----------HVH21          <---------MYB55(2)  <---------ANAC46      <---------ATHB12  --------->DEAR3(1) ---->TOE1(3)  --------->WOX13(1)<-------TEIL            <---------HSFB2a(2) --->ZAT6 --------->MYB46(3) <------NtERF2               --------->HSFB2a(2)            <----------DOF2 ----GT1  <---------MYB111(2)--------->LBD16       <---------ALFIN1              <---------ALFIN1   < ---->TOE2(3)--------->MYB46(3)------->PIF5        --------->ZAT6             ------>ZmHOX2a(1)------   ctaatcccatcaacaaccaatctacaccgtccgcgtgcatgaatatcgatctaacacttccaaaacaattcatcttgttcctcccactctctttctcctc  10600000                                                                 --------->MYB52(1)                                                              --------->TOE2(3)                                                              --------->TOE1(3)                                                           <---------WRKY18(1)                                                          --------->WRKY12         <---------MYB46(3)                <---------ANAC58                      ------>NtERF2             ------------>MYB.PH3(2)                <---------ANAC46                     <---------ALFIN1   <----------ID1<-----------GT1            <---------ANAC58                      --------->ANAC58      --------->ANAC58  <-----------GT1        ---------->DOF2          --------->ANAC46      --------->ANAC58 ----------DOF2 <---------ANAC58                --------->MYB52(1)    --------->MYB52(1) >ZmHOX2a(1)<---------ANAC58       ---------->DOF2--------->ANAC58 --------->ANAC46--------->MYB52(2)   ttctttacccattttcttgtgtgtgtttaaagagacagaaagagagaacaaaacgacaccttgaccttaacgaaacgacaagagtttgttactctctctc  10600100                                       <----------DOF2                                       --------------->AGL15                                       <---------------AGL15                                      <-----------------AGL3                                      ===============================================================                                <------------------------ANAC81                        <------------------------ANAC81                    <----------DOF2  ---------->ID1               <------ZmHOX2a(1)<----------DOF2              ----------->GT1   <---------DAG2                 <---------AHL20(2)       <---------------AGL15   <---------ANAC58            <---------AHL20(2)       --------------->AGL15   <---------ANAC58 <---------ARR14(2)       ================================================MADS_MADS      <-----------------AGL1 <-----------GT1    --------->ARR14(2)--------->ANAC55(2) <----------DOF2    <---------DAG2  <-----------GT1  <----------DOF2   tctctttttctctaagaggaaacttttttttttgcttttttctttttgtggattcctttgtttattttatgtgatgtttttgttgaatgcttcattcaca  10600200                           <---------------AGL15                           --------------->AGL15                          <-----------------AGL2                          ----------------->AGL3                          ----------------->AGL2                      <---------At4g35610                      --------->At4g35610                      <------NtERF2                      <---------ZAT2                      --------->ATERF1(1)                     <---------ATERF1(1)                     ------>NtERF2                    <---------RAP2.6(2)                    --------->ATERF1(2)                    <---------ATERF1(2)                    <---------DEAR3(1)                   --------->ATERF1(1)                   <---------LBD16      <---------ANAC58                  <---------ATERF1(1)   <---------ANAC58                <--------P<-----------------AGL3             --------->ALFIN1<-----------TBP                              <---------AHL20(2)           <-----------RAV1(1) <---------AHL20(2)           <------ZmHOX2a(1)      <------ZmHOX2a(2)  <---------At4g35610             <---------At4g35610 ==========================================MADS_MADS     --------->At4g35610         <---------YAB1   tctcgtcgatcaaatgtggtagccggctgctatttatagatagggtgagagagagagggagaggacatatatcgatttttttttggtatgagagataata  10600300                                                           <---------AHL20(2)                                                       <---------AHL20(2)                                                      --------->ARR11(3)                                                      --------->AHL20(1)                                                      --------->AHL20(2)             --------->TOE1(3)                        <---------AHL20(1)             --------->TOE2(3)                        <---------ARR11(3)                  <---------AHL20(2)          ------->GAMYB <---------AHL20(2)            <---------AHL20(2)           ----------->GT1         <---------ALFIN1                       --------->ANAC55(2)            --------->MYB46(3)---- <---------CCA1(2)    <---------YAB1      <---------AHL20(2)       --------->GLK1(2)--------->TOE2(3)   cccatatatcaacacccttaaactattaatatgaagtcttggatttttttaagtaatatattttaagagactctagcaccatcaaacgttatattttttg  10600400                                             --------->AHL20(2)                                             <---------AHL20(2)                                             --------->ATHB51                                             <---------ICU4                                             <--------ATHB1                                            <---------YAB1                                  --------->GLK1(1)         <----------DOF2          --------->At4g35610                                             ---     --------->ZAT14    <---------AHL20(2)  --------->ICU4                    --------->ZAT6   <-----    <----------DOF2     --------->AHL20(2)--------->YAB1                    <-----------GT1    <-----    <---------DAG2  <---------AHL20(2)   <---------ATHB12              ---------->DOF2        ------- <---------ALFIN1   --------->AHL20(2)   <---------ATHB51            <---------YAB1           ------- ------>ID1  ---------->ID1       <---------At4g35610              --------->YAB1             <------   tctccactttactttgtctcatataattttttaggcatctccaataataatttctatattttcttctatttataaaagtaactctattttagaggtatcg  10600500  Previous    Next  AGI:  At3g28345.1    Description:  ABC transporter family protein. Identical to Multidrug resistance protein 13 (MDR13) [Arabidopsis Thaliana] (GB:Q9LHD1); similar to PGP18 (P-GLYCOPROTEIN 18), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT3G28390.1); similar to P-glycoprotein, putative [Arabidopsis thaliana] (TAIR:AT3G28415.1); similar to PGP17 (P-GLYCOPROTEIN 17), ATP binding / ATPase/ ATPase, coupled to transmembrane movement of substances / nucleoside-triphosphatase/ nucleotide binding [Arabidopsis thaliana] (TAIR:AT3G28380.1); similar to Cyclic peptide transporter [Medicago truncatula] (GB:ABD33400.2); similar to hypothetical prot Range:  from: 10594990    to: 10600012    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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