Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                      ---------->DOF2                               -        <-----------HVH21                            <------ZmHOX2a(1)                              -    --------->DAG2                     <---------At4g35610                                          -   ---------->DOF2                     --------->At4g35610                 ------->GAMYB   <---------MYB59 ------>DOF2                         <-----------RAV1(2)          <------MYB83             --------->TOE2(3) ->At4g35610                --------->ANAC58   --------->CCA1(2)  <------MYB46(1)          --------->TOE1(3) --At4g35610                --------->ANAC58------->TEIL         --------->MYB59   <----------DOF2  <   aaaggaaaagtgtcactgttgagactccacaagcctgtctcagatgaatatatgaggaaagtgaagttaggtttcaacagaacaactttgtaacctaaaa  10588500                                                                                 --------->HSFB2a(2)                                                                               <---------ANAC46 ------>NtERF2                                                          --------->ANAC46           <- -------->bZIP60(1)                               --------->GLK1(2)     --------->ANAC58          <-- -------->ANAC46                                 <---------GLK1(2)      --------->ANAC58          <-- -------->ANAC58                    --------->LBD16                <-----------ARR10           ------ -------->ANAC58                   --------->HSFB2a(2)           --------->GLK1(2)        <------ZmHOX2a(1) ---------bZIP60(1)                <---------HSFB2a(2)          <---------GLK1(2)<---------HSFB2a(2)   cgacgccattctcaactcttgtagctattcccaaaatccagaaacaatccagtttctgtgaaggaagaatctctacgcattgcctagaaacaggattagc  10588600                                                           --------->ANAC46                                                           --------->ANAC58                                                 --------->LBD16                                   <-                                                <---------ANAC58                                 ----             <---------ANAC58                   <---------ANAC46                                 ----             <---------TGA1a------->TEIL        <---------ANAC58                  --------->HSFB2a(2) --------ANAC46   --------->ZAT6            --------->MYB46(3)                    <---------HSFB2a(2) -----TEIL   <---------ANAC58--------->MYB46(3) <---------ANAC55(1)   <-------TEIL--------->HSFC1(1) ---------------------TaNAC69(2)     --------->WOX13(1)    --------->ANAC58 <---------YAB1   <------- --->At4g35610 ----------->HVH21  <---------ARR11(3)       --------->O2  <---------YAB1     ---------   tacgtagaaagactgacttgacactcgatgaaccaatatcaatccaacatccgtgtaagacacgactctagcttcattatagttctcgaatttgtcggta  10588700                                                 <---------ARR14(2)                                                 --------->AGP1                                                 --------->ARR14(2)                                                --------->At4g35610 -----ZmHOX2a(1)                 <---------TOE1(3) <-------TEIL                   --------->TOE2(3) ----->ANAC58                    <---------TOE2(3)<------ZmHOX2a(2) ------>ZmHOX2a(2) ----->ANAC58      ------->GAMYB <---------YAB1 <---------At4g35610<---------GLK1(1) --DEAR3(2)     --------->MYB52(1)  --------->GLK1(2)             <---------ARR11(3)           ------ >ETT(1)  ----------->GT1   ----------->GT1 <-----------HVH21     --------->ARR11(3)  <---------REM1(2)   aggaaggaagagatgtaataaccgagagaatggttaagattccaattgtcagatccatagtgagacatgatctctgtctcacaacctctacacatgagtg  10588800                                                                            <---------CCA1(2)                                                                      --------->GLK1(1)                                                                      <---------GLK1(1)                                                                <---------ICU4                                               --------->ARR14(2)   --------->ATHB12                                               <---------ARR14(2) <---------WOX13(1)                                             --------->LBD16    <--------ATHB1                        <---------ZAT14     <------NtERF2       --------->ATHB12           <---------YAB1                   <---------ANAC46    -------->ATHB1         --------->ATHB12           ---------->DOF2            --------->ICU4         --------->YAB1<---------ANAC46    <------NtERF2       <---------YAB1          <-------------        --------->ICU4 <---------REM1(1)   <---------LBD16     <---------ATHB12  --------->AtLEC2  <-      --------->YAB1 <---------ANAC46   <-----------HVH21      <---------ATHB51<---------ANAC58    -- ----->HVH21        <---------AtMYB61 --------->DAG2        ------------>ATHB5 <---------ANAC58  <---   accatgaagaatgatgagagttttggtgtagagattggaaaaggtcgcggaaacaccgagactcaatgattgatttccataccttgcaaaccagttttgg  10588900                                                    ------>ZmHOX2a(1)                                                  ==============================HOX2a_HOX2a                                                  ------>ZmHOX2a(2)                                                 ===============================HOX2a_HOX2a                                                 <------ZmHOX2a(2)                                                --------->ARR14(2)          <----------DOF2     <---------YAB1                             <---------ARR11(3)       ------>ZmHOX2a(1)     --------->ICU4            --------->ANAC58 <---------GLK1(2)    <---------ARR14(2) ----AGL2                  --------->ANAC58     <---------ARR14(2)   <---------ARR11(3) --------AtMYB61           --------->ANAC58   ----------->ARR10      --------->ARR14(2) ------->ALFIN1   <---------ZAT6 --------->YAB1 --------->ARR11(3)  <---------CCA1(2)          <----- ------ANAC46<----------DOF2   --------->ANAC58 --------->AGP1 --------->GLK1(2)    ---------->ID1   agtggtgatgatgctctttagtggtaatctcgcaagtataatctcccatagatcctctgtgagaaaatccatatccttctttttttgtctctccatgaat  10589000                                                                                      ------>NtERF2                                                                                     --------->LBD16                                                                                    --------->ANAC46                                                                                   <---------LBD16                                                                                 ------>MYB46(1)                                                                                 ------>MYB83                                                                                 -------->P                                                                                <---------ALFIN1                                                                               <---------ALFIN1                                 <---------TOE2(3)                           <---------TCP20    <------MYB46(1)              <---------TOE1(3)                          ------>NtERF2          --    <------MYB83      --------->ZAT18                                      ------>NtERF2          <--   <---------TOE2(3)  <---------ZAT18                                      --------->LBD16    -------   --------->MYB59   <---------ANAC58                     ----------->GT1 <---------RAP2.6(2) <------ -------CBF          <---------ANAC58  <-----------GT1   ----------->GT1 <---------LBD16     --------   tggattaggttttttttttttgtgcgtgctcgattagggtttcactcgattttgtagggatgttaaatagggttttccggcccaacccggccctatttat  10589100          --------->TOE2(2)                                                                        <-          --------->TOE2(3)                                                                       <--         --------->YAB1                                                                        <-----    ------------>CBF                                                                    ---------->DOF2 -------->DOF2                               ----------->GT1                           <---------AHL20(2) -------AHL20(2)    --------->TOE2(3)       ----------->GT1                      --------->HSFB2a(2) -->AHL20(2)        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                        <---------HSFB2a(2) ---AHL20(2)        --------->TOE1(3)     ---------->DOF2 --------->ALFIN1   <----------DOF2   <----- ->AHL20(2)------>ZmHOX2a(1)<----------DOF2--------->DAG2<-------GAMYB      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   ttaaagtccaatcctaagtaaaccctaaccctttttaagcctaaaaaagtttaaaatagggttgagccctatttaagccctttctagatttaaagtgctt  10589200        ---------->DOF2   ----------->GT1                                                       ----------->GT1 --------YAB1                                                   <---------YAB1--------->ZAT6--------- ---------TBP                         --------->YAB1         --------->AHL20(2)            --------->ANAC46 ----DAG2                 ----------->RAV1(1)                <---------AHL20(2)          --------->AtMYB61 -----DOF2     ---------->DOF2   ------------>CBF  --------->ZAT6--------->YAB1       --------->ZAT6   ttttatagttaaaagagaaaagtttttccaacaaaaacaattataagttaacaacactattgttttattatcaaatggaaacactataacaccacaacat  10589300                       <---------ANAC58       --------->AHL20(2)                                    ---------->DOF2 -->RAV1(1)            <---------ANAC58            <-----------GT1   ataaaacaattttttctctcattttgcttaaatataaaacattcttacccatattacaaatccaaaagaaactgagcaattctttccaatggctacaaat  10589400  Previous    Next  AGI:  At3g28330.1    Description:  F-box family protein-related. Identical to Putative F-box protein At3g28330 [Arabidopsis Thaliana] (GB:Q9LHD3); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G28223.1); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 10587803    to: 10588949    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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