Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  <----                                                                                                -----                                                                                           --------->AHL20(2)         ------->GAMYB                   --------->ANAC58    <---------AHL20(2)         --------->TOE1(3)      ----------->RAV1(1)                --------->ANAC58    <-----------GT1            --------->TOE2(3)    --------->ZAT18             ---------->DOF2           <---------ICU4             <-----------GT1  <-------PIF5--------->At4g35610       --------->DAG2   --------->ICU4        --------->DAG2  ------  ------->PIF5<---------At4g35610      ---------->DOF2 --------->TOE2(3)      ---------->DOF2  ------   ggcaagtgcaacagtctgatgacaaaccaagtactaaagaataaagcaagagaaatgccttaattacttctagtcaaacaaaaagtattaccttaaaata  10534200       <---------MYB52(1)                                        <---------YAB1  --------->YAB1                                               --------->YAB1 -----ARR11(3)                                                 --------->AHL20(2) ---->ARR11(3)                                                --------->ICU4             --------->YAB1 --->RVE1(1)                                                  <---------YAB1          <----------DOF2 --->CCA1(1)                       <------ZmHOX2a(1) <---------ICU4               <----------DOF2----   tctataaccattagtataaaactttagaattcatggaggagttttcagacttcaaacatggctaattataaaacacatatatgtctttctttcatcatct  10534300                                                         <---------DAG2                                                       ------>MYB46(1)               <---------AHL20(2)                                                  <-----------GT1                   <---------AHL20(2)              --------->ANAC55(2)            --------->YAB1           <---------ICU4<---------AHL20(1)              <---------ANAC55(2)           <---------ATHB12          --------->ATHB51  <-----------GT1    --------->ANAC46     --------->ATHB12 --------->WOX13(1)  <-----------GT1   <---------AHL20(2)  <-----------GT1       <---------ATHB12------------>CBF <----------DOF2        --------->AHL20(2) ------->GT1<-----------RAV1(2)        <-----------GT1 ------>MYB83--------->YAB1   --------->AHL20(2)   tgttatacatcatatcaggtaatctaatcactggtttgatataacaatcaatataccaactttttttcttcataatttcagtttaattaatttccatgtt  10534400                                                                                                  ---                                                                                                 <---                                                                                               <-----                                                                                               ------                                                                                              <------                                                                                           --------->AHL20(2)                                                                                           <---------AHL20(2)                                      <-------TEIL                             ----------->GT1-------                              --------->ZAT14                                 --------->DAG2---------                              <---------ZAT14                                ---------->DOF2<--------                             --------->AtLEC2  <---------TOE2(3)   --------->ANAC58        --------->ICU4    <---------HSFB2a(2)   <---------WRKY38(1)  <---------TOE1(3)   --------->ANAC46        <---------ATHB51    --------->HSFB2a(2)  ------------>CBF      <---------YAB1      --------->ANAC58      --------->YAB1   tctcttacagaaggaagttttatgggagtcaatgcacaggtacatgcttaagattactcttaaacaaaaacgaaacttgaaaagtaaacaaaaataatta  10534500                                                                                              ------>MYB83                                                                                              ------>MYB46(1)                                                                                            <--------                                                                                         ------>NtERF2                                     <---------ZAT18                                     <---------WRKY18(1)                                     --------->ZAT14                                    --------->WRKY12 ------>YAB1                         <---------ZAT14                                    --------->WRKY38(1) ------YAB1                          --------->ZAT18                <---------ANAC58    ----------->HVH21 ----ICU4                         <---------ANAC58                  --------->ALFIN1   <----------CDC5 --->YAB1                         <---------ANAC58                  <---------ANAC58  --------->At4g35610 ---YAB1                     ------>ZmHOX2a(1)             ------------>CBF   ----------->RAV1(2) -->ICU4                <---------CCA1(2)       <---------AtLEC2  <---------ANAC58    <---------At4g35610 >YAB1      ----------->TBP  <----------DOF2<---------ANAC58      <---------ANAC46   --------->ANAC58 -ICU4    <-----------TBP<-----------GT1    <---------ANAC58      <---------ANAC58   --------->ANAC58   tcatatatagttttatatatagttttatatccttttgagtgctcttacttgcagggccaaatgcaatggtgtgtggctaagcctggcacgctgaccgaac  10534600                                                                                                  ---                                                                                                  <--                                                            <------ZmHOX2a(1)                   <----                                                   <----------ID1                  --------->ARR11(3)                                                   <---------ETT(2)                <---------ARR11(3)   --------->AHL20(2)  --------->ALFIN1       --------->AHL20(2)                  --------->CCA1(1) <   <---------YAB1    <---------ANAC58       <---------GLK1(2)               --------->LBD16     <---- -MYB59              <---------ANAC58      <---------At4g35610          <-----------GT1  --------->YAB1   aacttataaataacttaaactacgcgtgttcgatagtcgattgtcagattatatcgacaagaggagcatgttattctccagataatatctataatatggc  10534700                <---------ICU4           ------->TEIL        <---------YAB1    <-----------TGA1    <---------RAP2.6(3)   --------->bZIP60(1)   <---------TGA2(1)     <---------ZAT2   --------->ETT(2)      --------->ZAT2   <---------bZIP60(1)   <---------At4g35610   <---------ETT(2)      --------->At4g35610 ------>At4g35610       ------>MYB83 -------At4g35610       ------>MYB46(1)                                                   ------>ZmHOX2a(1) -----ANAC58   <---------YAB1                            <---------ANAC46               ------>ZmHOX2a(2) -----------RAV1(1)<-----------GT1         --------->HSFB2a(2) --------->GLK1(2) --------->MYB52(1) -----ANAC58  <----------DOF2           <----------DOF2 <---------LBD16      ----------------->AGL1   ttctgtcgtcatgaatctttattaccaagctgaaggaagaaacttttggaattgcaatttcggagactctggtctcgttgccataactgatcctagtgag  10534800                                                                           <---------ETT(1)                                                                           --------->ANAC46                                                                 <---------YAB1                              --------->GLK1(2)                --------->AHL20(2)                      --------->ZAT14                          <---------AHL20(2)                      <---------ZAT14                         --------->AHL20(2)             <----------DOF2 --------->YAB1                   <---------AHL20(1)--------->ANAC58 ----  <<<<<<<<<GATA-1 --------->ZAT6             <----------DOF2  <---------AHL20(2)--------->ANAC58 <--- <-----------GT1  <-----------GT1         ---------->ID1------>ZmHOX2a(2)  ----------->HVH21     ----   ttttatctatctcttctttttcactatacaataatctatgttttgttcttttgtttgatctcaaattatttttgtttccgacaggctatggaagttgcaa  10534900                                                 --------->ANAC58                                                 --------->ANAC46                                                 --------->ANAC58          <---------TOE1(2)             <---------CCA1(2)                               <---------ICU4          <---------TOE2(2)            <---------ARR14(2)                               -------->ATHB1       <---------ANAC58                --------->ARR14(2)                <---------ARR11(3)       <---------ANAC46                <---------ARR11(1)                --------->ARR11(3)       <---------ANAC58                ------->TEIL                     --------->GLK1(1)   ------->TEIL                       <---------ARR14(1)              --------->YAB1    --------->ATHB12 ----->ICU4   ---------->DOF2         <---------CCA1(2)  <---------ARR11(3)             --------->YAB1 ------ARR14(2)                    <------ZmHOX2a(2)     --------->ARR11(3)>>>>>>>>>RAP2.2 ----->ARR14(2)      ----------->GT1------>ZmHOX2a(2)---------->DOF2 <---------YAB1    <---------ATHB12   atatgaatttcgtatgtaaagcatagaaaaattcgcgatcgtatctcttacaagacaaagaactcttggttatgatatctaaactttgaatcattgttca  10535000                                                           <---------------AtSPL3                                                           --------------->AtSPL8                                                  --------->YAB1                                                 <---------YAB1                                                --------->ARR11(3)        --------->AHL20(2)   <-----                                            <---------AHL20(2) ------->TEIL     <---------ANAC55(2)                      <---------AHL20(2)   --------->AHL20(2) <-----------GT1 --------->AHL20(2)   --                <----------DOF2 --------->ANAC46<---------ARR11(3)        <---------AHL20(2)   <-----   gtttttctattatctaaactttatttcattgtccaaaccatcttatttaatatcataccaatatgtacctctctacttaattacatatggtcgatgttgg  10535100  Previous    Next  AGI:  At3g28250.1    Description:  glycosyl hydrolase family protein 17. similar to glycosyl hydrolase family protein 17 [Arabidopsis thaliana] (TAIR:AT2G43670.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67524.1); contains InterPro domain X8 (InterPro:IPR012946) Range:  from: 10534561    to: 10534926    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version