Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             <---------ANAC58           --------->ANAC55(2)           <---------ANAC58  --------->ANAC58                                                      <-----------GT1  --------->ANAC58                                        --------->GLK1(2)  --------->ANAC46                          --------->MYB52(1)<---------At4g35610 --------->LBD16               ----------->GT1           <---------GLK1(2)      --------->ARR11(3) --->KAN4(2)          --------->ARR11(3)  <---------MYB52(2)  --------->At4g35610               -----   tcccacgaaattttcgtaacatgagttcttggagagaaaaaaaaactaacaaaatgttagattctgctcatattttacaaaatatcaagaacaaaaaaca  10474600         --------->TOE1(2)        <---------ANAC58        <---------ANAC46        <---------ANAC58        <---------TGA1a        --------->TGA1a       <-------TEIL                <---------ICU4       --------->SPL7             <---------YAB1       ------->TEIL               --------->ICU4                                                <----     --------->TOE2(2)          --------->YAB1      --------->ANAC46                       <---------ANAC58     --------->TOE1(2)     --------->AHL20(2)    --------->ZAT14        --------->AHL20(2) <---------ANAC46     <---------SPL7     --------->YAB1           <---------ZAT14   --------->YAB1          <---------ANAC58 ------>GT1         --------->AHL20(2)   --------->AHL20(2)     --------->YAB1            <-------TEIL   gcaaaaacgtacgtgggaacaaataaacataaaatcataattttaaaatacttcacagaatacaaataatcaaaataaatcccaagaacaagttcgtgga  10474700                                             --------->YAB1                                             --------->AHL20(2)                                             <---------AHL20(2)                                         <---------ICU4                                        <---------YAB1                                      <---------ICU4               --------->MYB52(1)   ---------->DOF2                   --------->ANAC58  <---------YAB1              <---------MYB59    ---------->DOF2                 ---------->DOF2    <---------ARR11(3)           --------->TOE2(3)<------MYB46(1)            <----------ID1          --------->ARR11(3)           --------->TOE1(3)<------MYB83        ---------->DOF2---------->DOF2--------->YAB1             <---------DAG2 <--------P    ---------->DOF2--------->ANAC58--------->YAB1             <-----------GT1<---------TOE1(3) ------ID1----------->GT1         <---------YAB1        <---------TOE2(3)    <---------TOE2(3)     <-   gacaaaaaaagaaagtgacaaaagcaaaagagtttgatgatcatcatttatattttctatggttttaccttaccgatttgaggttggaaagaaagaacat  10474800                                                                                          --------->ARR14(2)                                                                                          --------->GLK1(2)                                                                                          --------->ARR11(3)                                                                                          <---------ARR11(3)                          <---------YAB1                                                  <----------                       --------->GLK1(2)                                                  <---------ARR14(2)                      <---------GLK1(2)                                    --------->ANAC58                      <---------ARR14(2)                                   --------->ANAC58                      --------->ARR14(2)               ----------->GT1     ----------->GT1<---------ARR14(3)                     <------ZmHOX2a(1)     --------->LBD16            <----------ID1      --------->ARR14(3)                 ---------->DOF2        --------->MYB52(1)      ---------->DOF2    ----------->GT1  - --------YAB1  <---------AHL20(2) ---------->DOF2  ---------->DOF2------------------------>ANAC81 <--   tttgatcagcgatggatttaaaaggattctgataaacaaagaaaccggtgaagaaaagagttatacaaaaggaagacaagaaaaatggagaaaatcttcc  10474900                                                                               <---------ETT(2)                                                                          <---------ANAC58      --------->YAB1                                    <---------------------WRI1<------ZmHOX2a(2)      <---------ICU4                                  ----------->HVH21   <---------ANAC58  <-------TEIL                                        ----------->TGA1    <---------AtLEC2 -ARR10 <---------YAB1                     --------->ANAC58          <---------ICU4 -------->YAB1                             --------->ANAC58  --------->ATHB12 --------->DDF1 -------TOE1(2)<---------CCA1(2)           --------->ANAC46 <---------YAB1<---------ANAC46 *TSS<-----   aatgttcatcatcatccatctctctgattttttctctgaagtttcacgaaaaatcgatgacgatgatttcatcgttgcatgtcgatcatccctagaaaca  10475000                                                                                                <----                                                                                                <----                                                                                  ----------->GT1                                                                                 ----------->GT1<----                                                                                --------->DAG2  -----    --------->MYB46(3)                                  ---------->ID1         ---------->DOF2 <-----   ------>MYB46(1)                                     <-----------GT1    ------>ZmHOX2a(1)  <-------   ------>MYB83                                    <---------ARR11(3)     <---------------AGL15<-----  --------->MYB52(1)                               --------->ARR11(3)     --------------->AGL15------ --------->TOE2(2)         --------->YAB1    --------->REM1(2)           --------->TOE1(3)   <------- --------->TOE1(2)        <---------YAB1  --------->ANAC46<----------DOF2--------->TOE2(3)   <------- ----ICU4       ----------->TBP   <-----------TBP  <---------GLK1(2) <----------DOF2 --------->AHL20(2)   ttaccaacgaataaacttatatatgtctataattctatatatacacgcgtagagatttttctttttattctctttccttaaaaaagtttaaatttgggtg  10475100                                                                                    ------->GAMYB                                                                                    =================                                                                                 --------->MYB52(1)                                                                                ----------->HVH21                                                                              <---------bZIP60(1)                                                                              <---------ANAC55(2)                                                                              <---------ANAC58                                                                              --------->ANAC58                                                                              --------->TGA2(1)     --------->YAB1                                                           --------->ANAC55(2)    ----------->GT1                                                           --------->bZIP60(1) --MYB83                                                                      --------->ANAC58 -----MYB46(3)                                                                <---------ANAC58 --MYB46(1)                                                                   <---------TGA2(1)<----- ------>GT1                                                                  ----------->STF1  ------ ----AtMYB61                                      <---------RVE1(1)         <---------TGA2(2)<------- --ANAC46                 ----------->GT1        <---------ARR11(3)        ----------->TGA1 <------NtERF2 ----DEAR3(1)            --------->DAG2          --------->ARR11(3)      --------->YAB1     <-------- --->ALFIN1             ---------->DOF2        <---------YAB1            <---------ICU4    <---------RAP2.6(3) --ANAC58         ----------->GT1  ------->GAMYB--------->YAB1          <---------ATHB12   <--------- --ANAC58        ----------->GT1--------->MYB52(1)<---------CCA1(1)     --------->ICU4    --------->ANAC46   gtgaaaatgaaaatttgtgaaggaaaaaaagttataacggcgattttttatgatatttttgtttgttttcttcaatgatgacgtaacggtagccgtcaga  10475200          <---------ANAC58          <---------ANAC46          <---------ANAC58       --------->ALFIN1      <-------MYC2      ------->MYC4      ------->MYC2      <-------PIF5      ------->MYC3      <-------MYC3      ------->PIF5      -------->ABF1      <-------MYC4     --------->ANAC55(2)     <---------O2     <---------TGA1a     --------->ANAC46     --------->TGA1a                                                                               <-     --------->O2                                             <-----------GT1                      -- ==============MYC_MYB                           <---------ARR14(2)                          -------- ----At4g35610   <---------TOE1(1)    ------->MYC3    <--------P                            <-------- --->At4g35610   <---------TOE2(1) <---------AtLEC2 ----------->GT1                         <-------- ----RAV1(2)--------->ALFIN1       <---------ANAC58 <------MYB46(1)           --------->ANAC46  <---- -MYB52(1)<---------bZIP60(2)      <---------ANAC58 <------MYB83        <---------ANAC58   <--------- --HVH21 <------NtERF2--------->ALFIN1<-------MYC3<---------WOX13(1)    <---------ANAC58 <-----------HVH21   tgaatacacgtggcgtgctacgaggtggtatgtgtttgcatgtgaattgtggattggtaagttttttctagttttcttgcactaaaccacatttcacggc  10475300     <----------DOF2 --------ARR14(2)                                              <-----------GT1 ------->ARR14(2)                                <---------AHL20(2) ->ANAC46                            <----------DOF2  <---------AHL20(2)                       ------ -LBD16        <----------DOF2       <---------DAG2   --------->AHL20(2)             --------->HSFB2a(2) -At5g28300<-----------GT1  <-----------RAV1(1)  <---------AHL20(1)          --------->YAB1<--------- -----ANAC46XXXXXXXXXXXXXXXXXXXXX>MIR4221        --------->AHL20(2)       --------->YAB1<---------GLK1(2) --GT1  <------------------------ANAC81    --------->ANAC55(2)----------->HVH21  <----------DOF2  <--   gtaatctcttttttttcctttgttgaaattttgttgccactttttaagtattttatttaaatgtgtaacgcgtctactataatctttctcgattctcctt  10475400                                                            <---------ARR11(3)                                                            --------->AHL20(1)                                                            <---------AHL20(1)                                                            --------->ARR11(3)                                                   <---------ICU4                                                   <---------AHL20(2)                                                   --------->ATHB51            <---------ICU4                                                   --------->AHL20(2)         <---------YAB1          <---------YAB1                           <--------ATHB1           --------->YAB1       ----  <-----------GT1                                 --------->ICU4<---------------AtSPL8      --------- >ZmHOX2a(1)                                      <---------ATHB12         <-------TEIL   --------->AHL20(2) --GT1  <----------DOF2                           <---------ATHB51 <-----------GT1        --------->YAB1 --------DOF2  --------->ATHB12                 --------->YAB1  --------------->AtSPL8   <---------ATHB12   cttttcacaacttttattgatttcaaaacttatgtatactaggctatttctaataatttgaaaatatttgtactatattcatcattcaccaataaaaagg  10475500  Previous    Next  AGI:  At3g28150.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G15900.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82134.1); contains InterPro domain Protein of unknown function DUF231, plant (InterPro:IPR004253) Range:  from: 10473079    to: 10474991    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version