Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    <--------HAHB4                  -------->HAHB4               --------->ATHB51                  --------->ATHB51             <--------ATHB1                  <---------ICU4               <---------ICU4                  -------->ATHB1               --------->ATHB12                  --------->YAB1               -------->HAHB4                  <---------AHL20(2)          --------->ICU4                 <---------ATHB51             <---------AHL20(2)                 --------->ICU4               <---------ATHB51                 <---------YAB1               --------->AHL20(2)              --------->AHL20(2)              <---------YAB1              <---------AHL20(2)            --------->YAB1                                       <---              <---------YAB1            ------->GAMYB                                            <---             <---------AHL20(2)       ------>MYB83                                    <---------RVE1(1)        ------->TEIL<---------YAB1    ------>MYB46(1)                    ---------->DOF2   <---------     --------->ANAC58                 -------->P                  ----------->GT1     <---------CCA1(1)     --------->ANAC58  <---------ANAC46--------->MYB46(3)        --------->HSFB2a(2) <---------ARR11(3) ------->YAB1--------->AHL20(2)  <-----------GT1                 <---------HSFB2a(2) --------->ARR11(3)   ataataaacgcacattttaattattatgtgtattttttccaaccaaaaataattgagtattcaacgtctagataaaaaagagactgagatttttttcgac  10443700                                       --------->ICU4                                -------->HAHB4                                <---------ICU4                                --------->YAB1                               <---------YAB1                             <---------ICU4                             --------->YAB1                            --------->ICU4                           --------->AHL20(1)                 --------->AHL20(2)              -------                          --------->YAB1                      <---------AHL20(2)        <---------AHL20(2) -------DOF2          <---------HSFB2a(2)             ----------->GT1            --------->YAB1 ------DAG2           --------->HSFB2a(2)       --------->At5g28300   <---------MYB52(1)--------->AHL20(2) --GT1      --------->MYB52(1) --------->ICU4 <---------ZAT6 --------->AHL20(2) <---------ATHB12   tttttctccaaaaaaaacgaagttccaaaaataatgatgaaattagtagtggtaaatggtcaatttaaatccgttgctacaaatcaaaatttaaatctgt  10443800                              >>>>>>>>>MYB2                          --------->YAB1                        <---------TOE2(3)                     <---------YAB1                   -------->ATHB1                  --------->AHL20(2)                  <---------AHL20(2)                  <---------ATHB51               <---------AHL20(1)               <---------AHL20(2)               --------->AHL20(2)                          --------->ANAC58               --------->AHL20(1)            <-----------ARR10  <-----------GT1 --------->ICU4             --------->GLK1(2)    <----------DOF2            -------- --------->AHL20(2)<---------ICU4           <---------GLK1(2)--------->YAB1              --------->YAB1 ---->GT1     --------->AHL20(2)   ----------->GT1         --------->ANAC58       <-----------GT1   -   aaattaactaaatctattaaattattaatgaaaaccaatgtaaaaagaatctcaacttctcaagcatactttgtttcaaatattctactattcaaaatac  10443900             --------->TOE1(3)             --------->TOE2(3)       --------->YAB1       <---------ICU4                                                                              --      <---------ATHB12      <---------At4g35610                                                    -- ->ARR14(2) ----------->RAV1(2)   ------>ZmHOX2a(2)                                  <-----------HVH21 -------->TOE2(3)           --------->At4g35610       ------------>CBF            <---------ICU4   --   tcccttaaatcataacctgaaactcacataagctgatccaaaattgaatttcattccacaatttttctcttaaacttcatataaacatgtcagcatgtta  10444000                                             ------------>CBF                                      --------->ZAT14                                      <---------ZAT14                           <---------ALFIN1                                      --------->ZAT18                          ------>MYB83                                      <---------ZAT18                          ------>MYB46(1)                                    --------------->AtSPL8                    <---------ALFIN1                               --------->TGA1a                         <----------DOF2                               <---------TGA1a                  <---------ARR11(3)              <---------At4g35610  <---------ANAC46             <-----------ARR10              --------->At4g35610--------->ALFIN1  *TSS  <---------LBD16<-----------HVH21    =====================================bZIP_DOF --------->YAB1--------->GLK1(2)--------->MYB46(3)    <----------DOF2            ===================================================bZIP_DOF ------->ANAC58        --------->ARR11(3)   --------->ANAC46    --------->ARR11(3)       <----------DOF2 ------->ANAC58        <---------ARR11(3)  --------->ZAT14 ------>ZmHOX2a(1) <---------MYB55(2) ------->ANAC46       <---------CCA1(2)    <---------ZAT14 --------->LBD16   --------->MYB46(3)   cacggccttttttgtctgcttcatatatctctcaagtgtgtgtactacacaataacatttcctgaaaatctaactttcacccactcaccatcttttcttc  10444100                                                                       --------->GLK1(2)                                                                       <---------ARR11(3)                                                                       --------->ARR11(3)                                                                    --------->AHL20(2)                                                             --------->AtLEC2     ---------->DOF2                <----------ID1--------->ANAC46               ----------->GT1    <---------ATHB12   -- <----------DOF2XXXXXXXXXXXXXXXXXXXX>MIR415               <-------TEIL--------->RVE1(1)            <-   tctctttccccatcaaaaaaaacaaaaacaaaacacaactctgtttctctcatcttaaaattcatgtaaaaaaaatctacaaatcaaagagagaaacaga  10444200                                                                ----------->GT1                                                         <------------MYB.PH3(1)                                <----------DOF2         <-----------------AGL1                           --------->GLK1(1)           --------->MYB52(1)                          <---------ARR14(2)           <---------DOF5.7(2)                          --------->ARR14(2)          ----------->HVH21                        --------->LBD16              <---------MYB52(1)                       --------->ANAC58              --------->DOF5.7(2)                       --------->ANAC58              <-----------HVH21                       <------NtERF2                --------->LBD16   --------->YAB1      <<<<<<<<<<MYB80                      --------->LBD16              <---------ATERF1(2)<---------ICU4     <---------MYB46(3)                      <---------LBD16              --------->ATERF1(2)-------->HAHB4     <------MYB46(1)                      ------>NtERF2               <---------ANAC46   --------->ICU4      <------MYB83     ---------->DOF2 <---------ANAC46             <---------LBD16    <---------ATHB51   <---------TOE2(2) -------->DOF2       <---------ANAC58       ----------------------->TaNAC69(2)         <---------MYB52(1) --------ZAT14       <---------ANAC58      ----------->ARR10 <----------DOF2<---------KAN4(2)  <-----   gtaaagagaaagagaagaagatggcgcggaaatactttcagagagaagttttgccggtaacggctttggtaataatggaatgtgcaaacgttggtttaaa  10444300                                                                                 <<<<<<<<<TBF1                                                                      --------->ZAT14                                                                      <---------ZAT2                                --------->At4g35610                   <---------ZAT14       ---------->DOF2---------->DOF2                <-----------------AGL1<---------At4g35610------- ------GT1        <----------DOF2 <----------DOF2 --------->DOF5.7(2) --------->ZAT2         <-------   cactctgtttaaagcagcaactttgaaaggcatgagctttcatgtcttcatcgtttactcttatggtctcgctgctctgcttcttcttccttctctgttt  10444400                                                                                           <---------                                                                                     <---------AHL20(2)                                                                                     --------->AHL20(2)   <-----------HVH21                                                           <---------ANAC58  <----------DOF2                                                              <---------ANAC58  <--- ---------------->TaNAC69(2)    ------>ZmHOX2a(2)                            --------->ARR14(2) ----- -----------------ANAC81--------->ATHB12           <---------At4g35610       <---------ARR14(2) -----   tgctctttcaggtctctctctcttcttgattcgatctcgatactaaatttttcatctaatcttgaaaattggctaatcggttcttgtttaatttcacaga  10444500                                                                                                    -                                                                                                    <                                                                 ---------->DOF2                 ----  <---------ARR11(3)                                    --------->ATHB12                        ----- --GT1                                                 --------->ICU4                         ------>MYB46(1) ---ZmHOX2a(2)         <-----------GT1                 <---------YAB1     <---------CCA1(2)   ------>MYB83 ---->AGP1   --------->DEAR3(1)               <----------DOF2<---------ANAC46               <-------- ---->ARR11(3)     ------->TEIL             <---------ZAT18  ----------->GT1             <-----------GT1   tcaagaactcttccaccgatgaatttctctattctctacaaaatcgtgctcttagggattattgggtaaaagtctcatctcttgaaattttctaccaaat  10444600  Previous    Next  AGI:  At3g28050.1    Description:  nodulin MtN21 family protein. similar to nodulin MtN21 family protein [Arabidopsis thaliana] (TAIR:AT5G40240.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14809.1); contains InterPro domain Protein of unknown function DUF6, transmembrane; (InterPro:IPR000620) Range:  from: 10444051    to: 10446635    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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