Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     --------->TOE2(3)                                                 <-----------------AGL1  <---------YAB1                                --------->ARR14(2) ------->ICU4                                   <---------ARR14(2) ---->TGA2(2)                        --------->LBD16 ------TGA1                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2) -->TGA2(1)                  --------->ARR11(3)<---------CCA1(2) ---TGA2(1)                  <---------ARR11(3)--------->GLK1(1) -->bZIP60(1)          ------->GAMYB<---------ANAC58 ---bZIP60(1)       --------->MYB52(1) --------->ATHB12               ---------->DOF2 ---O2          --------->GLK1(2)   <---------ANAC46                <---------ATHB12 -->O2         <---------GLK1(2)    --------->ANAC55(2)           --------->WOX13(1) -->ANAC55(2) --------->HSFB2a(1)   <---------ANAC55(2)       --------->ANAC58 ---ANAC55(2) --------->GLK1(1)     <---------ANAC58------>ZmHOX2a(1)--------->YAB1 ----STF1    ----------->ARR10      <---------ANAC55(1)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)--- --->STF1  --------->LBD16  --------->YAB1    <xxxxxxxxxxxxxxxxxxsmallRNA(fl3)           <---------YAB1 -TGA2(2) <---------ANAC46 ----------->GT1    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)    <---------YAB1 ->TGA1  <---------LBD16 ---------->DOF2 <---------WOX13(1)   --------->ANAC58 ------->TEIL<---------AHL20(2)   cattttgattttacggagattctaacggaaagataattccgtgattgacatatcctaaatggccaagtcaatgaaagtatgaaacttgattatttttttc  10425100                           <---------ARR11(3)                           --------->ARR11(3)                  <---------AHL20(2)                      --------->AHL20(2)                      --------->AHL20(2)                      <---------AHL20(2)          <-----------GT1                  <------ZmHOX2a(1)      <-------TEIL <---------At4g35610                    -------- ------->DOF2   <---------TOE2(3)   ---------->DOF2   --------->At4g35610       <-----------GT1     -   aaaagtcaaactaaattttaggatttaaatgtcttcttgaaagttcatgttttttcatctcaaatttaaaagtttgggtttttttcgacattttccaaca  10425200      <---------ICU4      --------->ARR11(3)      <---------ARR11(3)      <---------AHL20(1)      --------->AHL20(1)   --------->YAB1   --------->AHL20(2) --------->AHL20(2) --------->AHL20(1)                                <---------At4g35610               ---------->DOF2 --->RAV1(1)           <---------AHL20(2)         ------->TEIL          <-----------GT1 -------->YAB1       <----------DOF2   --------->DAG2       ---------->ID1       <---------------AGL15   aaaaataatattttctcttgtttctttatttgttttcagaaaaattggtatgtagctaatttgtctcttcaaaataacattttttaaaaaaggaaaacaa  10425300                                                                                   <---------MYB46(3)                                                                                 <-------GAMYB                                                                  --------->At4g35610       ---------                                                                  <---------At4g35610 --------->WRKY38(1)                                                           --------->ZAT14      <---------ANAC58                                                           <---------ZAT14      <---------DEAR3(1)               <----------DOF2  <----------DOF2            <---------ZAT18      <---------ANAC58       <----------DOF2    ---------->DOF2     --------->ICU4 ------->TEIL    --------->LBD16<--------   ggccttagactttgggcctttcttaagaaaaagactttagaatgggccaatattgagacagtgtacttagctcataaaccgggcgttgttgactccttgt  10425400                                                                        ------>ZmHOX2a(2)                                                                    <---------ETT(2)                                                                    --------->ETT(2)                                                                   <------NtERF2                                                                  ------>NtERF2                                                                 --------->RAP2.3(2)                                                                 --------->RAP2.3(3)                                                                 --------->DEAR3(1)               --------->AHL20(2)                            --------->DEAR3(2)               <---------AHL20(2)                            <------------AtMYB77         <---------ANAC46                          ----------->TBP<-----------HVH21       *TSS<------      ------->GAMYB    --------->ANAC58        <---------ANAC46 --------->RAP2.3(1)     --------->DAG2     --------->MYB46(3)--------->ANAC58        ----------->GT1--------->DEAR3(1)       ---------->DOF2     <------------AtMYB77----------->RAV1(2)--------->O2     <---------MYB55(2)       <---------AHL20(2)    <---------At5g28300--------->ANAC46     --------->bZIP60(1) --------->RRTF1(1)  ----------->TBP   <-----------GT1  <---------ARR14(2)      <---------O2     --------->MYB46(3)    ------->TEIL  ---- ------------>WRI1  --------->ARR14(2)      <---------bZIP60(1) --------->ERF1  <---------ANAC55(2) -ANAC46<---------MYB52(1) xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)------->GAMYB     <---------ANAC46 <---   acatataaccgtcgtgttttaatatacgcctgagaacgagaaaacgacgtcgtataaattcaaaccgccgtcgatcgtcactacgtatataaagggcttt  10425500                                                                                             <------MYB46(1)                                                                                             <-------                                                                                             <------MYB83                                                                             --------->HSFC1(2)                                                                             <---------ZAT2 <--------                                                                             --------->At4g35610   <-                                                                             <---------At4g35610   <-                                                                             <---------HSFC1(2)    <-     --------->ANAC46                                                        <---------HSFB2a(1)  <--    <---------LBD16          --------->AHL20(2)                              --------->HSFB2a(1)<---- <-----------GT1             <---------ARR11(3)                    --------->ARR11(3)      <--------P ----DOF2                  --------->ANAC58                        <---------ARR11(3)      <---------MYB52(1) ----->AHL20(2)            --------->ANAC58        --------->AHL20(2) <----------DOF2    ------>ZmHOX2a(1) ------AHL20(2)     --------->ZAT14<---------TOE2(3)      <---------------AtSPL8         <-----------RAV1(1)   taattacacggcgaagtctctctgttctcaagaaattaagaaactgagaaaaaaaaaatgggagtacaaggtctttgggagcttcttgctcctgttggtc  10425600        --------->LBD16                                           --------->TOE2(3)        ------>NtERF2       <---------ANAC46               --------->MYB52(1)     <------ZmHOX2a(2)             --------->LBD16 --MYB46(3)                   --------->ATHB12          --------->LBD16                   <---------RAP2.6(2) -AtMYB61                  --------->MYB52(1)           ------>NtERF2                    <---------LBD16 --------ANAC58           ------->GAMYB                <---------DEAR3(1)           <---------YAB1 --------ANAC46          <---------MYB52(2)           <---------LBD16              <---------AHL20(2) --------ANAC58          --------->MYB46(3)       --------->ARR14(2)               <---------AHL20(1) ----NtERF2              <---------MYB55(2)       <-----------ARR10          ----------->GT1      <<< -----DEAR3(1)         ----------->RAV1(1)        <---------ARR14(2)    --------->YAB1 <-----------GT1   gccgtgtctccgtagaaaccctagccaacaaacgattagccatcggtaaacaaatctccggcgatcaacttcaattgtattgtattatttttccggcttc  10425700                                    <------MYB46(1)                        --------->CCA1(2)                                    <------MYB83            ----------->TGA1                                    ----------->GT1         ----------->HVH21                            --------->ARR14(2)            <---------ANAC55(1)                            <---------ARR14(2)            <---------ANAC58<---------ARR11(3)                       <---------ANAC58                   --------->ANAC55(2)                       <---------ANAC58                   <---------ANAC55(2)                       <---------ANAC46                   <---------ANAC46--------->ARR14(2)                    --------->ARR14(2)           ---------->DOF2          --------->ARR11(3)                   <---------At4g35610         <---------YAB1--------->REM1(2)          <---------ZAT18                   --------->At4g35610      <---------AHL20(2)            --------->ARR11(1)       --            --------->ARR14(2)     --------------->AtSPL8 <---------ANAC58<---------ARR14(2)       ==      <---------SPL7<---------ARR14(2)      --------->AHL20(2) <---------ANAC46         --------->ZAT18 <<<<<<TBF1 <---------ARR14(2)     <---------------AtSPL8<-------TEIL   ----------->ARR10      ------   ttcttcatcgttcgaatttgcagatgcgagtatatggatggtacaatttatcaaagcgatgcgtgacgagaagggagatatggttcagaatgcacacttg  10425800                                                  ------>ZmHOX2a(2)                                 <                                                 <------ZmHOX2a(2)                                  <               --------->ARR14(2)               --------->ARR14(2)                            <------               <---------ARR14(2)               <---------ARR11(3)                      <---------SPL7              <------ZmHOX2a(1)                 <---------ARR14(2)        --------->LBD16     <------            <---------TOE2(2)         <------ZmHOX2a(1)  <----------DOF2  ------>NtERF2--------->TOE1(1) ---->ZmHOX2a(2)         <----------DOF2        --------->ARR11(3)<---------At4g35610 <-------------- ====================HOX2a_HOX2a      ==================HOX2a_HOX2a      --------->ANAC46   <-------- ----->HVH21<---------TOE1(2)         ===================HOX2a_HOX2a    <---------LBD16--------->TOE2(1)   atcgggttttttcgaaggatttgtaagcttttgtttctaaggactaaaccgatcttcgtctttgatggagctactccggcattgaaacgtcgtactgtta  10425900                                                                                                    <                                                                                                   --                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                                   --              --------->O2                                                                       <---           <---------WRKY38(1)                                                                  <----           <---------WRKY45                    <---------At4g35610                             <-----           <---------WRKY12                    <---------ZAT14                                 ------       <------NtERF2                           --------->At4g35610                            -------      ------>NtERF2                            --------->ZAT2                                 <------     --------->DEAR3(1)                        <---------ZAT2                               <-------- ---------ANAC58                       --------->LBD16                                    <---------ANAC58 ---------ANAC58                      <---------HSFB2a(2)      <----------DOF2            <------MYB46(1) ---MYB52(1)<---------DOF5.7(2)       --------->HSFB2a(2)      <---------------AGL15      <------MYB83 ---YAB1  --------->DOF5.7(2)        <---------LBD16           --------------->AGL15      <---------ANAC58 -AtSPL3<---------ETT(2)           <---------ARR14(2)        <---------At4g35610          <---------ANAC46 -ZAT6<---------ATERF1(1)          --------->ARR14(2)        --------->At4g35610         <---------AtMYB61   ttgctcgccgtcgtcaacgtgagaacgctcagactaaaatccggaagactgctgagaaattgctgcttaatagggtttgtttagtctcgatttggtgtgg  10426000  Previous    Next  AGI:  At3g28030.1    Description:  UVH3 (ULTRAVIOLET HYPERSENSITIVE 3); nuclease. Identical to DNA-repair protein UVH3 (UVH3) [Arabidopsis Thaliana] (GB:Q9ATY5;GB:Q9LRT2); similar to DNA repair protein, putative [Arabidopsis thaliana] (TAIR:AT1G01880.1); similar to hypothetical protein OsI_010193 [Oryza sativa (indica cultivar-group)] (GB:EAY88960.1); similar to hypothetical protein OsJ_009467 [Oryza sativa (japonica cultivar-group)] (GB:EAZ25984.1); similar to Os03g0205400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049313.1); contains InterPro domain XPG N-terminal; (InterPro:IPR006085); contains InterPro domain XPG I; (InterPro:IPR006086); contains InterPro domain H Range:  from: 10425490    to: 10432441    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version