Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     --------->ARR14(2)                                                   <---------ARR11(3)                       <---------ARR11(3)          <-----------ARR10              ------>ZmHOX2a(1)                    <---------ARR14(2)          --------->ARR11(3)                       <---------ARR11(1)          <---------ARR14(2)                      <---------CCA1(2)          --------->GLK1(2)                  --------->ORA47(1)          <---------ARR11(3)                ------->GAMYB --------->ANAC58      <---------GLK1(2)    --------->DEAR3(1) --------->ANAC58      --------->ARR11(3)  --------->DEAR3(2)                           ----------->GT1 --------AtLEC2     --------->YAB1       <-----------GT1                              ---------->DOF2 --GT1    --------->ARR14(2)             --------->MYB52(1)                        <---------TOE2(3)-   tgcaagtaagaaaatccttcaattagatttttaaaaatcaacttaaccggccaaatctttgtttaaaacaacaattcaaatatttgacgaaagaaaaaat  10364300                --------->AHL20(2)             <---------AHL20(2)            --------->AHL20(2)       <------ZmHOX2a(2)     ------->GAMYB                                       <---------ANAC55(2)    --------->MYB46(3)                                   --------->ANAC55(2)   <---------TOE1(3)                                    --------->MYB59     <---------ANAC58     <---   <---------TOE2(3)               <---------AHL20(2)   --------------->AtSPL8             --------->YAB1  --------->MYB52(1)         ----------->GT1       --------->DAG2           <---------ANAC58     ----  <---------DOF5.7(2)        <---------ANAC46 >>>>>>>>>MYB98------->TEIL <------ZmHOX2a(1) <---------ICU4 -------->DOF5.7(2)---------->DOF2--------->YAB1  ---------->DOF2     ------>NtERF2       --------->ICU4   cagttaacgatcgattaaataaaaagacatggtgtataatattgtagtaacataaagttatgtacctattgccgaggagcttgtggagacgaataatgag  10364400                        <----------DOF2                                        --------->O2            ----------->GT1                                                    <---------ALFIN1            <---------ANAC46                                                 <---------ALFIN1          <---------ZAT14                     --------->AHL20(2)       <---------DAG2          --------->ZAT14                     <---------AHL20(2)       <----------DOF2 ------ARR11(3)       <---------ANAC58        <---------ATHB12     --------->REM1(1) ----->ARR11(3)       <---------ANAC58        <---------ATHB51  <---------ETT(2)     <----------DOF2   gtcttcttcttgttcagtgaaattgcctttgttcacattagggctcaaataattcatccatctcagtctacaacttttcccacatctctttagccctatc  10364500                              <---------AHL20(2)                              --------->AHL20(2)                          <---------AHL20(2)                                   --------->TOE1(2)                         --------->AHL20(1)                        <---------AHL20(2)                         --------->ARR11(3)                    --------->AHL20(2)                         <---------AHL20(1)              --------->AHL20(2)    <---------LBD16                         <---------ARR11(3)            ----------->GT1      ---------->DOF2                        --------->CCA1(2)             <---------TOE2(3)--------->YAB1          <-----                       --------->ARR11(3)            ---------->DOF2--------->YAB1          ---------                       <---------ARR11(3)  <---------STY1(2)  --------->AHL20(1) --------->LBD16                --------->MYB52(1)         --------->STY1(2)  <---------AHL20(1)--------->ANAC46   aacgaatcaaatttagtctaactgagatatatttatatatgaactagctagagactaaagttaatatatataatcacaaaacgcgcgagagagagaaaga  10364600                                                                                               <-----                                                                                               <-----                     --------->ARR14(2) --------->ATHB12                      --------->At4g35610          ----------->HVH21             <---------ICU4         --------->ARR11(3)           <-------- ----------AtSPL8    <---------ARR14(2)<---------YAB1         <------ZmHOX2a(1) ------->GAMYB  <----- ->DOF2   ----------->TGA1             --------->ICU4       <---------TOE2(3) <---------At4g35610   gtaccagtttttctgacgatgcggttccattggccagtgccatgattaagaacatagtccataaggatgttgtcttcttcaactgtccataaacctttct  10364700 ----ANAC58                                                              <---------ANAC58 ----ANAC46         <---------CCA1(2)     <----------DOF2                <---------ANAC46 --DOF2<---------GLK1(2)            <---------YAB1                       <---------ANAC58 ----ANAC58  <----------DOF2  ------>ZmHOX2a(1)<---------AHL20(2)  <---------YAB1   tgtattcttgattctctttttcatctcttctccttattctcattctttttttattctctgattccttctatgtttgtgtgtgtctgtgtgtgtgtgtgag  10364800                                                      ----------->TBP                                                    <-----------TBP                                               ------->PIF4                                               ------->MYC3                                               <-------PIF4                                               <-------MYC3                                               <-------PIF5                                               <-------MYC2                               <---------ICU4                                               ------->MYC2                               --------->YAB1                                               ------->PIF5                              <---------ATHB12                                               <-------MYC4                     <----------DOF2                                               ------->MYC4                  --------->ARR14(2)                                              --------->O2                   <---------ARR11(1)                                              <---------O2                   <---------ARR14(2)                                              --------->TGA1a                ------->TEIL--------->ICU4                                              <---------TGA1a                <-----------ARR10                                              <---------ANAC55(2)           <---------CCA1(2)                     <---------ZAT14          --------->ANAC55(2)           <---------ARR14(1)                     --------->ZAT18     ----------->HVH21                <---------ANAC55(2)                     <---------ZAT18   <---------ANAC58                   --------->ANAC55(2)             <---------YAB1  --------->ATHB12 =============================================bZIP_DOF          --------->ICU4 --------->ICU4<---------ANAC58                   <---------ANAC55(1)          --------->GLK1(2) <---------YAB1   ------------>OsbHLH66        --------->ANAC55(1)      --   ---------->DOF2   --------->ZAT14   --------->ANAC55(2)          ------------>CBF     <---------YAB1   agagagaaagagattatgagtagtgaacttatgatgggttttcgtgacacgtgcttatatatacactcacatcaatacgtatctttgtgtaatcatggct  10364900                                                                                                    <                    <---------ICU4                                                                <--                   <---------ATHB12                                          ----------->GT1   <<<<<<                   --------->ICU4                                         ---------->DOF2     <------MYB83                 ------>MYB83                                      <---------ANAC46           <------MYB46(1)               <---------MYB111(1)                <----------DOF2  <---------ANAC58           -------               <---------MYB59                    ------>ZmHOX2a(1)--------->ANAC55(2)      <--------               <---------------AGL15             --------->TOE2(3) <---------ANAC55(2)     <---------ZAT2               --------------->AGL15        --------->DOF5.7(2)    <---------ANAC55(1)     <-------GAMYB         <---------------AtSPL8           <---------ANAC58         <---------ANAC58       --------->MYB55(2)         --------------->AtSPL8           <---------ZAT6        <---------MYB52(1)        <---------MYB46(3)  --------->YAB1 ------>MYB46(1)          <---------ANAC58    --------->ANAC46         ------------>AtMYB77 ------->YAB1------->TEIL             <---------ZAT14  <-----------GT1   <---------AHL20(2)<---------At4g35610   ataagcataaatatgtacctaataatgtatagatagcgactatagcgttatcctttgttaccctacgttacgtattaaaagctaaaatttggcagttggt  10365000                                <------------CBF                              --------->AHL20(1)                              --------->AHL20(2)                              <---------AHL20(2)                             <---------AHL20(2)                      <---------ANAC58     ------->TEIL            --------->AHL20(2)                      <---------ANAC58    <---------CCA1(2)    ----------->TBP                           <---------YAB1 ------------CBF      --------->AHL20(2)                      <-----------GT1 -------AHL20(2)      <---------AHL20(2)                 >>>>>>>>>RAP2.2 <<<<MYB80        --------->AHL20(2)                   <---------ARR11(3) ---->GT1         <---------AHL20(1)          ------>ZmHOX2a(1)   <---------ZAT14               ----- -MYB52(1)        <---------AHL20(2)    <-----------GT1--------->ARR11(3)            <-----------GT1   ttaattgtatctatggccaaaaaatttataaaaaaattgttttttctcctctggcaatatctaaatactatacttgcgacatgaaatttacaaaaacaaa  10365100                                                                          --------->DOF5.7(2)                                                                         --------->TOE2(3)               <---------At4g35610                                       --------->TOE1(3)        --------->ALFIN1                                                --------->ANAC58        <-----------RAV1(1)                                        ----------->HVH21     >>>>>>>>>>AGL20                                           <---------AHL20(2)     >>>>>>>>>>AGL22                                          <---------AHL20(1)     >>>>>>>>>>AGL24  <---------------------WRI1              <---------AHL20(2)  <---------------AGL15                                       --------->AHL20(2)  --------------->AGL15                             --------->ATHB12    --------->ANAC58          --- <-----------------AGL2                         <-----------GT1--------->AHL20(2)                 --- <-----------------AGL3                    --------->ATHB12   --------->AHL20(1)  <---------MYB52(1) ---->ARR14(2) --------->At4g35610        <---------YAB1----------->GT1 <---------ANAC55(2)--------->ZAT18   tctactaaatatggggcagattactgcgaaatgttctatattgtatgatttaactgatttgtaatttatttgacacgttaaccagtttgtttatgcactg  10365200  Previous    Next  AGI:  At3g27920.1    Description:  GL1 (GLABRA 1); transcription factor. Identical to Trichome differentiation protein GL1 (GL1) [Arabidopsis Thaliana] (GB:Q9LF82;GB:Q9ST42); similar to MYB23 (myb domain protein 23), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G40330.1); similar to glabrous 1A [Arabidopsis lyrata subsp. kamchatica] (GB:AAS07575.1); similar to glabrous 1 [Arabidopsis halleri subsp. gemmifera] (GB:AAS07572.1); contains InterPro domain Myb transcription factor (InterPro:IPR015495); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain H Range:  from: 10363182    to: 10364743    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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