Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             <---------MYB52(1)                                       --------->YAB1     <-----------HVH21           --------->LBD16  <---------ZAT14      <----------DOF2          <---------ANAC46  <---------ZAT2      <---------ANAC46          <---------HSFB2a(2)         <---------YAB1      --------->At5g28300<---------TOE2(3)          --------->HSFB2a(2)   --------->DEAR3(1)        <-------GAMYB   <---------YAB1         <---------LBD16    <---------At4g35610 <---------ANAC58         <---------AHL20(2) <------ZmHOX2a(1)          --------->At4g35610 <---------ANAC58         --------->AHL20(2)   gaaggaggttttccggagagaaccagagagagcagcgactctgataagtggcttaatcgccgttactgcttccatttttatggattagagagagtttgag  10353200                                                                                                    -                                <---------ANAC55(2)                         <----------DOF2         <                                <------MYB46(1)                            <---------ANAC58        <-                                <------MYB83                  --------->ZAT14                     <--                                <---------ANAC46              <---------ZAT18           <---------AHL20(2)       -------->ZAP1           --------->MYB46(2)             --------->ZAT18           --------->AHL20(2)     <---------WRKY18(1)       --------->MYB59   ---------->DOF2      *TSS <---------ANAC58      ----    --------->WRKY38(1)        --------->MYB111(1)            <---------ZAT14    ----------->GT1<----    --------->WRKY12<------ZmHOX2a(1)       <---------ANAC55(2)       <---------ICU4<---------AHL20(2)   aaaatgttgaccgatgaagaaaggatgagagattaggtgaaggaatacataaaaagacagagagtccactaattttggctttggagttaattaaacttat  10353300                                     --------->TGA2(1)                                     <---------bZIP60(1)                                     <---------TGA2(1) --------->ICU4                            --------->ATHB12           <---------YAB1                            <---------ICU4           <--------HAHB4                            -------->HAHB4           <---------ICU4                            --------->YAB1          --------->ICU4         ---------->DOF2   <---------YAB1           <---------YAB1    ------>ZmHOX2a(1)      --------->ICU4         --------->YAB1   --------->TOE2(3)     <---------ICU4          --------->ICU4   --------->TOE1(3)     -------->HAHB4          <---------ATHB12 -------->ARR14(2)       --------->YAB1         --------->ANAC58                        <----------DOF2 ---------ARR14(2)      <---------ATHB51        --------->ANAC58                   <---------HSFC1(2) --------CCA1(2)        <---------ATHB12    --------->ANAC58                       --------->HSFB2a(1) -------AHL20(2)        --------->ICU4      --------->ANAC46              <---------ARR11(3) ----->YAB1           --------->YAB1 --------->bZIP60(1)  <---------YAB1  --------->ARR11(3)   <----- -----YAB1     <----------DOF2<---------YAB1--------->ANAC58 <-----------GT1       --------->HSFC1(2)   tatatcctcaaaaaagtctttaactaataatgattagtgacatcactcgcaagcattattattaaactatacaagagagcttcgaagggtctttagatgc  10353400                       ------->TEIL                       <-----------ARR10                       <---------ARR11(1)                       <---------ARR14(2)                       --------->ARR14(2)                    <---------ANAC58                <------MYB46(1)                <---------MYB46(3)                <------MYB83             <---------ANAC46             <---------ANAC58     <---------ANAC58 <---------ARR14(1)       ----------->HVH21     <---------ANAC58 <---------CCA1(2)      <---------ICU4    --------->ATHB12<---------ANAC58        ------>ZmHOX2a(1)                  <-----------------AG   <---------YAB1  <-------TEIL         ------>ZmHOX2a(1)                   <<<<<<<<<GATA-1     ----- --TEIL      <---------ANAC58        ------>ZmHOX2a(1)                     <-----------GT1   <-------   aaaccatgcttggaggcttggttcgtatcttatgtcttcctccttcctaatgaccgagagtttgtttctcatttgtttatctatccatttggcaagatgt  10353500                                            >>>>>>>>>E2Fc                                            >>>>>>>>>E2Fd                                           --------->LBD16                                           ------>NtERF2            ---------->DOF2                                          --------->ANAC58      <---------ANAC55(2)                                          --------->ANAC58   <---------MYB52(1)                                          --------->ANAC46  <-----------HVH21                   <---------ANAC46  <---------At4g35610  ================================HOX2a_HOX2a           <---------GLK1(2)         --------->At4g35610  ------>ZmHOX2a(2)    <------ZmHOX2a(1)               <---------ANAC58  <---------KAN4(1)--------->At4g35610       <--- <-----------RAV1(2)    <-----------GT1 <---------ATERF1(1)----------->GT1                       ---- ---->ALFIN1--------->GLK1(2)       <---------ANAC58  --------->HSFB2a(1)          <------ZmHOX2a(1) --ARR11(3)--------->ARR14(2)      <---------ZAT18   <---------KAN4(2) <---------At4g35610 --------->CCA1(2)   gtagcaggagtcggaatctcgccgtgtttccttccattgcgctcccgccaaatcgaatgatccgttacatgaaagctgtatcggaggaagaaggtatgga  10353600                                                                                         --------->ZAT6                                                                                        <---------ZAT18                                                                                        --------->ZAT18                                      *TSS                                              <---------ZAT14                             ----------->HVH21     <----------ID1          <------------CBF                          ------>ZmHOX2a(2)      --------->YAB1          <---------AHL20(2)                        --------->ARR11(3)<---------ANAC46               <---------YAB1 --------->ZAT14         --------->ZAT2 <---------ARR11(3)----------->GT1        ---------->DOF2    --------------->AtSPL8 ------GLK1(1)<---------ANAC58       <---------ANAC46        ----------->GT1<---------WOX13(1)    --- ----->GLK1(1)<---------ANAC58    <-----------RAV1(1)   ---------->DOF2  --------->AHL20(2)      <---   tttcattccctagcttccttgcccatgatctctcacatgttgtggagtttataacaacaaaagatgtaaaagtatataattgacaacatgtacactattt  10353700                                                                                                <----                                                      <---------ICU4                            -----                                                     <---------YAB1                <-----------GT1     --------->ANAC58                                --------->ICU4           <---------ARR11(3)<----     --------->ANAC46                      --------->ANAC58                 <---------YAB1      <----     --------->ANAC58                      --------->ANAC46               <---------ICU4        <---- ------>YAB1                               --------->ANAC58 <---------ALFIN1--------->ICU4      <---- ------YAB1         <---------YAB1       <-----------GT1 <-----------GT1  --------->YAB1       <<<<<<   tgataacacaccatacttgatgatgcttcttatcgtagagttttaacgccatttgattattaccaccttcttctactcatgatttttatcttacacttac  10353800          --------->ANAC46       --------->ZAT18       --------->ZAT14   <---------------AtSPL8                                                                          -- --------->ICU4                                                                                   --- -----ANAC58                                                                                      --- ---->ANAC55(2)                                                                        <---------ARR11(1) -----ANAC55(2)                                         ---------->DOF2                --------->GLK1(2) -----ANAC55(1)                                     --------->DAG2                     ------->TEIL<- -----ANAC46                                      ---------->DOF2          --------->YAB1        ---- -----ANAC58  ---------->DOF2             --------->At4g35610             <---------YAB1    --------- <<<NAP<---------ZAT14                    <---------At4g35610        --------->YAB1   <---------ARR14(1)   gtgatgatgtacacagaaaagtttgaaacgtatagaaatagataagctgaataaaaggcaaagagcaatatgcataatgaaaatcatcgaatctaagaaa  10353900 ------->DOF5.7(2)                                                 <---------ICU4 ------>TOE1(3)     --------->ANAC46                              <---------YAB1             <------- ------>TOE2(3)     --------->ANAC58                              --------->ICU4            <-------- --------MYB52(1)   --------->ANAC58                            --------->YAB1            --------->ICU4 ------->GT1 --------->YAB1                              --------->ZAT6  <---------ALFIN1 <---------YAB1 >ANAC46    <---------YAB1         <---------YAB1      <-----------GT1<-----------GT1   --------->YAB1   cgttaattcatattttgataacacaccatacttgatgatgcttcataagtagagttttaacaccattgattattaccaccttcttctaactcatgatttt  10354000              --------->ANAC55(2)              <---------ANAC55(2)              <---------ANAC46             <---------LBD16                                --------->At4g35610    --------->ANAC55(2)                                --------->CCA1(2)    <---------ANAC58                                  <---------AHL20(1)    <---------ANAC55(2)                               --------->AHL20(1)                       ------    <---------ANAC46        --------->ANAC46         --------->AHL20(2)                        ------    <---------ANAC58     --------->ZAT14           --------->AHL20(2)                   <-----------GT1   <---------TOE1(2)     <---------ZAT14         <---------AHL20(2)         --------->MYB46(3) ------   --------------->AtSPL3--------->ZAT18         --------->AHL20(2)   --------->DAG2 <---------ANAC55(2) --YAB1<-------TEIL  <---------------AtSPL8----------->GT1  <---------At4g35610      --------->ANAC55(2) -ARR11(3)  --------->MYB52(1)  ---------->DOF2 --------->YAB1      ---------->DOF2  ----------->GT1   tgtcttacgtacacttacgggatgatgtacacagaaaagtttgaaacgtataaaaatatataagctgaataaaaggcaaacaccaatatgtaacaacact  10354100  Previous    Next  AGI:  At3g27890.1    Description:  NQR (NADPH:QUINONE OXIDOREDUCTASE); FMN reductase. Identical to NADPH:quinone oxidoreductase (NQR) [Arabidopsis Thaliana] (GB:Q9LK88;GB:Q9XFI5); similar to unnamed protein product [Vitis vinifera] (GB:CAO42820.1); contains InterPro domain NADPH-dependent FMN reductase (InterPro:IPR005025) Range:  from: 10351893    to: 10353270    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g27895.1    Description:  transposable element gene. pseudogene, hypothetical protein Range:  from: 10353365    to: 10353638    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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