Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      --------->LBD16                                                                    ----------->GT1                                                                   <---------HSFB2a(2)                                                                   --------->HSFB2a(2)      --------->ZAT6                                    <---------YAB1    <-----------GT1            --------->HSFB2a(2)     <---------ANAC58                            -- --->ANAC46                  --------->ZAT2            <---------ANAC58                           <-- >ZAT18                      ----------->RAV1(2) <---------ZAT14  <---------LBD16      --------->TOE1(2) -ZAT18                      <---------ZAT2      --------->ZAT14<---------SPL7       --------->ARR11(3) ---AtSPL8                 <---------ALFIN1   <----------DOF2--------->ZAT14         <---------ARR11(3)   tcatattaacaccaagtttgagacatgttccacctggaaatttttgttctttgcagtgcttattgcagtccggaaattttgagcatagaccttcgacaat  10323100                                                                                <---------AHL20(2)                                                                       --------->YAB1                                                                       ----------->GT1                                           ------->TEIL               <---------YAB1                                         --------->ZAT18            <---------ICU4                                         <---------ZAT14            -------->ATHB1                                         <---------ZAT18            --------->ATHB12                  <---------DOF5.7(2) <---------ANAC58              --------->ATHB51          --------->At4g35610         <---------ANAC58             <---------AHL20(2)            <---          --------->ZAT2              <---------ANAC46             <---------YAB1      --------->AHL20(1)          <---------At4g35610       <---------ANAC46               --------->AHL20(1)  --------->AHL20(2)          <---------ZAT2            <---------ANAC58               --------->ICU4      <---------AHL20(2) ----->TEIL     --------->DOF5.7(2) <---------ANAC58               <---------ATHB51   --------->AHL20(2) ---------GT1  --------->TOE2(3) <---------GLK1(1)               --------->YAB1 --------->AHL20(2)   gtaccatttgtgagcagcgttaacttcgaccatagatttcgcgtgtacttcacctattgttttccaaaaattattgtaatattaaaaaaaaaattgttga  10323200     ------------------------>ANAC81                             <---------ARR11(3)     ----------->GT1                  --------->GLK1(2)     ------->GAMYB                    --------    --------->DAG2                   <---------GLK1(2)     --------->ANAC58                  --------    ------------------------>ANAC81--------->ANAC58        --------->ANAC46     <---------AHL20(2)  ---------->DOF2                  --------->ANAC58----------->GT1 --------->YAB1<---------AHL20(2) --------------AGL1  --------->AHL20(2)    <----------DOF2 --------->ANAC58------->TEIL  ---------->DOF2   acataaaaggcaaaaaaaaaaaaaaaaatcactcgacaagaatctctttcaatgggttacaacgcaatatcacaatgtattttttatttgtaaaagctta  10323300                                                           <---------YAB1                                                   --------->ALFIN1                                                 --------->ALFIN1                                        <-----------GT1  --------->CCA1(2)                                  <---------AHL20(1)    --------->ARR11(3)                                  --------->ARR11(3)    --------->ARR14(2)                <------MYB83 --------->YAB1      --------->DAG2  --------->TOE2(3)  <---------ARR14(2)                <------MYB46(1) ->TOE1(3)          ---------->DOF2  <----------DOF2    <---------ARR11(3)       --------->AHL20(2) ->TOE2(3) ----------->GT1        <---------ARR11(3)  ----------->ARR10      --------->AHL20(2)    <-   atatcacaatgtattgtgaaaataaagtgtatacaatatctttaactatatgtgtggagatatgatacaaaatttgatataaaataaacatttggtttgc  10323400                                        <---------AHL20(2)                                        --------->AHL20(2)                                    <---------YAB1                                    <---------AHL20(2)                                  --------->CCA1(2)                                 <---------ARR11(3)        <---------TOE2(3)                       --                        --------------->AGL15     --------->AHL20(2)                             ----                        <---------------AGL15----------->GT1                                  -------    <---------ZAT6   <-----------GT1--------->AHL20(2)    <-----------GT1                     <------ --------STY1(2) ------->TEIL    --------->ARR11(3) --------->AHL20(2)                       --------   tagttagtgttaactcatgaattttgctattttgagatataattaaacagaaaaaaatataaacgtttttttggcatacttggggcaagaagagcaacca  10323500                                       --------->ICU4                                     --------------->AGL15                                     <---------------AGL15                                    ----------------->AGL1                                    ----------------->AGL3                                    ----------------->AGL2                                    <-----------------AG                                    <-----------------AGL3           --------->ANAC58         <-----------------AGL2 ------->YAB1             <---------ANAC58 ----->AtLEC2             <---------AtLEC2 -->MYB46(3)              <---------ANAC58          <------------CBF ---ATHB12 --------->ANAC58       --------->bZIP60(1)     <---------AHL20(2) >P        --------->ANAC46       <---------bZIP60(1) ----------->GT1 <---------ICU4   tgcataagaacacaaggaagacacatttgcctgatgatgccatttttggttttgtattgtttatttttctaatatttgctaatggaacataatattactc  10323600                                                                                         <-----------                                                                                       --------->AHL20(1)                                                    <---------AHL20(2)                 <---------AHL20(1)             <-----------TBP                       <---------AHL20(1)                  <---------AHL20(2)             --------->AHL20(2)                    <---------AHL20(2)            --------->YAB1            --------->ARR11(3)                     --------->AHL20(2)        --------->TOE2(2)            <---------ARR11(3)                     --------->AHL20(1)  <----------DOF2 --------->AHL20(2)            <---------AHL20(1)              ----------->GT1    <----------DOF2   <------ZmHOX2a(1)<--          ------->TEIL                <-----------GT1 <------------CBF --------->TOE2(3)--------->ATHB12       <---------YAB1      <---------YAB1<----------DOF2   <---------GLK1(2) --------->TOE1(2)<------   aaaactcttatgaatatatatagagaaatatgatgagttttttcttttgtaaataaaattggattcttttctactttaatctaggataatttattgcatt  10323700                                           --------->CCA1(2)                                        <---------YAB1                                      --------->YAB1                      <---------YAB1                                      <---------ICU4                    <---------ICU4           ----                                     --------->ICU4                    --------->ICU4            ====       <----------DOF2             <---------ICU4                      <---------YAB1           <----      <---------ANAC58             --------->YAB1                    --------->YAB1           <------ -CBF <---------ANAC58            --------->ICU4                    <---------ZAT6       ------------ -------TOE2(3)                 --------->YAB1               <---------AHL20(2)          <-------TEIL ----DOF2  <---------YAB1     --------->AHL20(2)             --------->AHL20(2) <------ZmHOX2a(1)<---   aagttatggctttattatacatatatgaaagttttaataatcatgatatgggatgggatggatttatttagtgatgattataggatttagattcaatttc  10323800                                                                               <---------AHL20(2)                                                                               --------->AHL20(2)                                                                              <---------AHL20(1)                                                                              --------->AHL20(2)                                                                           --------->AHL20(1)                                                                           <---------AHL20(2)                                                                           --------->AHL20(2)                                                                           <---------AHL20(1)                                                                      <---------AHL20(2)                                                                      <---------YAB1           <----------DOF2<---------------AGL15                      <---------AHL20(2) <------------CBF         <---------DAG2                           <---------YAB1  <---------AHL20(2) ----------->AGL15        --------------->AGL15                   <---------AHL20(1) =========================================MADS_MADS    <---------At4g35610--------->AHL20(2) -------------AGL2  --------->YAB1                     --------->At4g35610<---------AHL20(2) ---ARR11(3)    ------>ZmHOX2a(1)      --------->AHL20(2)         <---------AHL20(2)     <------ZmHOX2a(1) >CBF   <-----------GT1   <----------DOF2  --------->YAB1       <---------AHL20(2)--------->AHL20(2) ------------AGL15 <---------YAB1      <---------AHL20(2)       <---------YAB1<---------AHL20(2) ----   ttctattggtttactttccttatgataacttttttgggtatttaatcacaagattgaagcagaaatattatttttattaaattatttaataggatttaag  10323900               <---------YAB1          --------->YAB1          --------->ATHB51          -------->HAHB4          <--------ATHB1          <---------ICU4         <---------YAB1        <------ZmHOX2a(1)         <---------ATHB51<---------AHL20(2)                   <---------ARR11(3)           <---------CCA1(2)         --------->ICU4 --------->AHL20(2)                    --------->ARR11(3)   --------->LBD16       <---------ICU4 <---------ARR11(3)                   --------->AHL20(2)  --------->ARR14(2)       --------->YAB1 --------->ARR11(3)  --------->AHL20(2)<---------AHL20(2) <---------ARR14(2) ----->YAB1  ----------->GT1  <---------YAB1               <---------AHL20(2)  --------->GLK1(2)   catagctaataataattgttataagatttaataggattgaagaaaaaaatactaattcaaattaaatcttataaaacccaaaatccgaaaaccgtctctt  10324000  Previous    Next  AGI:  At3g27835.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G27831.1); contains InterPro domain Gamma thionin; (InterPro:IPR008176); contains InterPro domain Knottin; (InterPro:IPR003614) Range:  from: 10322978    to: 10323543    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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