Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           <------ZmHOX2a(1)                                                                         --------->YAB1                                                                        ----------->GT1                                                                     <---------ANAC46                                                      --------->ZAT6 <---------ANAC58                                                    <-----------GT1  <---------ANAC58                                               >>>>>>>>>ARR1     <------MYB46(1)        --------->YAB1                         >>>>>>>>>ARR2     <------MYB83     --------->YAB1                          <---------YAB1     <---------MYB46(3)               ---- --TEIL <-----------GT1                      <---------TOE2(3)  --------->ALFIN1                ----- >GLK1(1)     --------->YAB1                 <---------TOE1(3)  <---------AtMYB61         --------->ANAC46 >CCA1(2)   --------->GLK1(2)   <---------ATHB12 ----------->GT1--------->MYB111(1)   <-----------GT1   atatgtataataacaatcttgatatataacttccatcatccatggttaagattgtaacaccatgagttggtgcgaggataattcatatatacaaaccaaa  10308300                             <---------ANAC58                             <---------ANAC58                             <---------ANAC46                                      <---------ARR14(2)                    <---------ANAC58                                               --------->ARR11(3)                    <---------ANAC58                                               <---------ARR11(3)  <---------ANAC46  <---------AtLEC2                    ---------->DOF2            --------->ARR14(2)  <---------ANAC55(2)    ------->TEIL            ------->TEIL                     <---------CCA1(2) ----->YAB1   <---------AHL20(2)            <---------AtLEC2           <----------DOF2  <---------AtLEC2 ----->DOF2------->TEIL <---------AtLEC2  --------->AtLEC2  <---------GLK1(2)  <-------TEIL         -   aatcacgcgtatgtatgttattgcatgcatgtcttgcatcatccatgcatgaatgcatcaaagagtctccagtctttaatatacatatctacatggatgg  10308400                                                                           <------MYB46(1)                                                                          <---------AtMYB61                                                                          --------->MYB59                                                                        <---------MYB52(1)                                                                      <---------MYB46(3)                                                                    <---------WOX13(1)                                                                  --------->ATHB51                                               <---------ICU4     --------->ATHB12                             <----------DOF2   -------->HAHB4    <---------YAB1                             <---------DAG2    --------->YAB1    --------->ICU4           <-------TEIL                        <-----------GT1       --------->ICU4   --------->YAB1         <---------ARR11(3)       <---------YAB1 <---------AHL20(2)    --------->YAB1  ----------->GT1<------MYB83--------->CCA1(2) --------->DOF2     <---------YAB1         --------->AHL20(2) <---------YAB1          --------->ARR11(3)   atgaaagtcatgaaaccatgttattaaaaccctttttcaaaacaaataataatgaaaccatgttgttataattggttaggtttgaagagatatacataga  10308500                                                                      <---------AHL20(2)                                                                     <---------WOX13(1)                                                                   --------->ATHB12                                                                  <---------YAB1                                                               <---------AHL20(2)                                                              --------->AHL20(2)                                                              <---------AHL20(2)                                                           <---------AHL20(2)                                                          --------->AHL20(1)           <-------MYC3                                   <---------AHL20(1)                        -           ------->MYC3                                   --------->AHL20(2)                        <           <-------MYC2                                   <---------AHL20(2)                      ---           ------->MYC2          ----------->GT1         --------->AHL20(2)         <---------TOE2(3)         ------->TEIL        <---------TOE2(3)        --------->AHL20(2)     --------->ZAT6----------      --------->AtLEC2  <---------ZAT6  <-----------GT1  <---------AHL20(2)<-----------GT1<---------TOE2(3) <---------ZAT18 <---------YAB1<------ZmHOX2a(1)   <---------ANAC55(2)--------->AHL20(2)  <---------TOE1(3)   tagtccccatgcatgtgttattagtagtgtttaggatgaaaataacccctaatacataaattaattttatgattaattaacactctaagattaaggtaaa  10308600                                                                                        --------->TOE2(3)                                                                                     <---------ALFIN1    --------->AHL20(1)                                                            --------->HSFB2a(2)    --------->AHL20(2)                                                            <---------HSFB2a(2)    <---------AHL20(2)              <---------ICU4                              ------>MYB46(1)    <---------AHL20(1)     <---------TOE2(3)                               <---------ALFIN1 <---------ICU4            <---------TOE1(3) --------->At5g28300         <---------MYB59--------->TOE1(3) -------->ICU4       --------->AHL20(2)    <---------DEAR3(1)      --------------->AtSPL3 ---------YAB1       <---------AHL20(2)   <---------LBD16          --------------->AtSPL8           < ------>YAB1  <----------DOF2  <--------P--------->ANAC46 *TSS     <---------------AtSPL3          -- ->GT1  <---------ICU4    --------->MYB52(1)----------->GT1    ---------->DOF2  ------>MYB83   <-----   acataattaattaagactttagattaattaagggttagtaatcacgcggtgaatttagtctctataaaagcagtacctcaccttccacaaccttcaatat  10308700                                                                              <---------AHL20(2)            <----------DOF2                                                   --------->AHL20(2)         <---------ARR11(3)                                               <---------AHL20(2)        <---------CCA1(2)                                                --------->AHL20(2)        <---------ALFIN1                                                 <---------ARR11(3)      <---------ALFIN1                                                   <---------AHL20(2)     --------->MYB46(3)                                                  --------->AHL20(1) ------->GAMYB                                                           --------->ARR11(3)         - ---------MYB52(2)                                                       <---------AHL20(1)      ---- ------->At4g35610                                                      --------->AHL20(2)      <---- ----ARR11(3)                     <----------DOF2  ------>ZmHOX2a(1)--------->AHL20(2)    ------>ZmHOX2a(2)   caactcacccacatctttctctcttattctctcactcttttttttttatattcctctctctctaaatctataaaatatatttaaaaacttgatcgtatat  10308800                                                                     --------->YAB1                                                                    =================================                                                                    <------ZmHOX2a(2)                                                                --------->HSFB2a(2)                                                                <---------HSFB2a(2)                                                               <---------LBD16                                                             --------->ARR14(2)                                                             <---------ARR14(2)                                                             --------->ALFIN1   --------->At4g35610                                                <------ZmHOX2a(1)  <---------ARR11(3)         ---------->DOF2                     ==============================HOX2a_HOX2a    --------->AHL20(2)                     --------->ALFIN1 <---------SPL7<---------At4g35610  ----------->GT1         --------->AHL20(2) <------ZmHOX2a(1)<-------TEIL--------->At4g35610   ===== --------->DAG2    --------->YAB1         =================================HOX2a_HOX2a          ===== --------->DOF2 <---------ICU4            <------ZmHOX2a(1)<---------MYB46(3)--------->At4g35610<---- ----->YAB1  --------->YAB1         ---------->DOF2    --------->ALFIN1--------->At4g35610  --------- -----AHL20(2)  --------->YAB1 ----------->GT1  ===========================HOX2a_HOX2a ----------->GT1   aataaagtaaataaagaataataacaaaaaaaatggagaaaagaggaggaggaagtagtggaggttcgggatcatcagcagaagcagaagtgagaaaagg  10308900                       <---------YAB1                   ------>ZmHOX2a(2)               <---------DEAR3(1)                  <------ZmHOX2a(2)             --------->ANAC46                 --------->ARR14(3)             <---------DEAR3(1)                 <---------ARR11(3)            <---------LBD16                 <---------ARR14(3)           <---------ALFIN1                 <---------AGP1               ------->GAMYB                 <---------ARR14(2)          --------->MYB46(3)               <---------ARR14(2)                 --------->ARR11(3)          <---------MYB55(2)               --------->GLK1(2) ==HOX2a_HOX2a   --------->ARR14(2)         ------>MYB83                --------->ANAC58     <------- ========================HOX2a_HOX2a        ------>MYB46(1)      --------->GLK1(1)           -------- =========================HOX2a_HOX2a       -------->P<---------AtMYB61 --------->ANAC58 --------->MYB52(2) --ZmHOX2a(1)    <-----------ARR10         ------>NtERF2  <---------MYB46(3)  --------->ARR14(2) ->DOF2        ----------->ARR10          --------->DEAR3(1)     <---------GLK1(1)      <-------TEIL   accatggacgatggaagaagatcttattcttatcaactatatcgccaaccacggcgatggtgtttggaattctctcgccaaatctgcaggttcgtttaat  10309000                           ----------->GT1                    -------->ATHB1                    --------->ATHB51                    --------->AHL20(2)                                        ----------->GT1     ---                    <---------AHL20(2)                                  --------->AtLEC2     --------                    <--------HAHB4           <---------ANAC46           --------->ANAC58     --------                   --------->ICU4      --------->ARR14(2)               --------->ANAC58     <------- --AHL20(2)        <---------ATHB12    <---------ARR14(2)      <-----------TGA1          ------>ZmHOX2a(1) ->AHL20(2)        <---------ATHB51<-------TEIL         <---------TOE2(3)  ---------->DOF2   --------   ttcttcttaaaatcaaattcaattatttatagttatatacatatatggtgtatgaactagggtttcgtcataacatgcaaaggtatatatcctatacgac  10309100                                           <-------TEIL                                           <---------TOE1(2)                                    -----                                           --------->SPL7                                <---------AHL20(2)                                           ------->TEIL                                  --------->AHL20(1)                                           <---------TOE2(2)                             <---------AHL20(1)                                         --------->TOE2(2)                              --------->AHL20(2)                                         <---------SPL7                                 --------->YAB1                                        <---------ANAC58                                <---------AHL20(2)                                        <---------ANAC55(2)                          <---------ICU4                                        --------->ANAC55(2)                          --------->YAB1                                        <---------ANAC46                            <---------AHL20(2) ------->DOF2                  <----------DOF2        <----------DOF2           <---------ARR11(3) ->ANAC58            ----------->GT1    <---------ANAC58                  <---------REM1(2)    <----- ->ANAC46           <---------TOE2(3)  <---------TOE1(2) --------->AHL20(2)     --------->ARR11(3) ---ID1<----------DOF2         <---------DAG2  <-------TEIL    <---------AHL20(2)   --------->AHL20(2) ->ANAC58           <---------TOE1(3)  --------------->AtSPL3  --------->AHL20(2)<---------RVE1(1)   aaaagcagactttttttttgttaaggtaaaatactttttcttacgtacgttcatttcttttatatataaatctatctacacagatattaattatattttc  10309200  Previous    Next  AGI:  At3g27809.1    Description:  unknown protein Range:  from: 10308654    to: 10309640    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g27810.1    Description:  ATMYB21 (MYB DOMAIN PROTEIN 21); DNA binding / transcription factor. Identical to Transcription factor MYB21 (MYB21) [Arabidopsis Thaliana] (GB:Q9LK95;GB:O22684;GB:Q9SBG4); similar to MYB24 (myb domain protein 24), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G40350.1); similar to MYB transcription factor MYB181 [Glycine max] (GB:ABH02847.1); contains InterPro domain Myb transcription factor (InterPro:IPR015495); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains Int Range:  from: 10308658    to: 10311545    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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