Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 --------->TOE2(3)         --------------->AtSPL3         --------------->AtSPL8   <---------ARR14(2) --------->AHL20(2)                      <----------DOF2                     ---   --------->ARR14(2) <---------AHL20(2)          --------->ATHB12      --------->AHL20(2)        <-- ->ZmHOX2a(1)  --------->TOE1(3)---------->DOF2   --------->YAB1        <---------AHL20(2)       <--- ---->RAV1(2)------->TEIL  <-------TEIL          <---------YAB1     ----------->GT1<---------CCA1(2)   gagggtatatggctgtaccttaatttaaatacatgaaagtattggtttactatcatttgattttctttcattgttaaattatctcatatattcttaagtt  10239400                                                                    <---------CCA1(2)                                                                  --------->YAB1                   --------->YAB1                               <---------ARR11(1)     ---------->DOF2                                           <---------ARR14(1)    --------->AHL20(2)        <-----------GT1              ------->TEIL                  --------->AHL20(2)    <---------AHL20(2)       <---------ICU4              <---------ZAT14       <---------AHL20(2)---- ------>ANAC55(2)  <---------AtLEC2               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) <---------YAB1 -------ANAC55(2)<-----------GT1             <-----------GT1   <---------CCA1(2) <-----------GT1 <--- ----TEIL      <---------AHL20(2)  <----------DOF2xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)--------->AHL20(2)   acataataaaagagtattttttcatgacaaattatcgcttttatattttacatacttactgaaccgtatcatatcacatatataaacaatattatatact  10239500                           <---------AHL20(1)                           --------->AHL20(1)                 ---------->ID1             <---------AHL20(2)            --------->AHL20(2)                                                   <---------MYB52(1)            <---------AHL20(2)                                                 --------->ANAC55(2)        <---------AHL20(2) <---------AHL20(2)                                  <---------ANAC55(2)        --------->AHL20(2) --------->AHL20(2)                                 <-------TEIL    ----------->GT1     --------->YAB1          --------->AHL20(2)          --------->ARR14(2)      -  <---------ANAC58     <---------AHL20(2)       <---------AHL20(2)          <---------ARR14(2)  <----  <---------ANAC46    --------->AHL20(2)       <---------YAB1      <---------AHL20(2)           -----  <---------ANAC58 <----------DOF2           --------->YAB1       --------->AHL20(2)        --------- ----->MYB52(1) <-----------GT1              --------->AHL20(2)   <---------AHL20(2)      <<<<<<<<<WRKY18 ------ICU4 <---------AHL20(1)            --------->YAB1          --------->AHL20(1) <---------At4g35610   aatggctcgtttaatttttttctttttaataaattagttgacaaaaattataaattagttttttaaaatttaatagaaaatacgttatgctgtcaaaatt  10239600        ----------->GT1                   --------->ANAC58    <---------YAB1 <---------ANAC46       --------->ANAC58                                    <------    <---------TOE2(3)       ----------->GT1                                                   <------ -------->YAB1     ----------->GT1        --------->ANAC46                                    ------- -----AHL20(2)  <-----------RAV1(1)     ---------->DOF2                             <----------DOF2 ---->AHL20(2) --------->ARR11(3)  <-----------GT1     <---------ANAC46          <---------YAB1 >ICU4 --------->CCA1(2)   <---------AHL20(2)          ----------->GT1 <-----------HVH21      -------   aaaaataagatagaaaatatgttgtatatttagttatttactaaaagcaattgaatggagtaaaatttgccacggtcagagttattctttcttaagttca  10239700                        ------------>CBF                 <------------CBF               --------->AHL20(1)               --------->AHL20(2)                             <----------DOF2    --------->MYB59    ------>NtERF2                  <-------TEIL                         <--------- ---ZAT14      <---------AHL20(2)                 <---------AHL20(1)            --------->ANAC58 ---ZAT18      <---------AHL20(1)                 <---------AHL20(2)            --------->ANAC58 -->ZAT18 ------>ZmHOX2a(1)       <----------DOF2 --------->AHL20(1)           ----------->RAV1(1) <- -->ZAT14 ------------>CBF      ---------->ID1   --------->AHL20(2) <----------DOF2*TSS   <---------DAG2   ctattttaggtcctcaattaattgaggccaatttgtctttttgtaatctcattatattcatcttctttctctttctcatcgcaccaaaaatgccttttgc  10239800                                                                  <----------DOF2                                                                ------>ZmHOX2a(1)                  --                                                            --------->GLK1(2)           ------>ZmHOX2a(1)                     --------->O2                           --------->ARR14(2)      --------->ARR14(2)                -------->P                                  <---------ARR14(2)      <---------ARR14(2)                ------>MYB46(1)                 <---------------AGL15              --------->GLK1(1)                ------>MYB83  <----------DOF2   --------------->AGL15              <---------GLK1(1) -DOF2    <---------CCA1(2) ------>ZmHOX2a(1)   ===================================================== --------ALFIN1 --------->ANAC46            <----------DOF2<---------GLK1(2)    <---------TOE2(3) <--   ccctctctctctatatccaacccatgtctcctctttatctctctaactttccccttagagagattcctctttctctcaaactagggtttcctctctgaaa  10239900                         <---------ARR11(3)                -------->ATHB1                --------->ATHB12                --------->ATHB51                <---------ICU4                <--------ATHB1                --------->YAB1                <------------ATHB5               <---------ATHB51               --------->ICU4               <---------ATHB12            --------------->AGL15                              ---------->DOF2        <---------ARR11(3)               <-----------GT1      <---------AHL20(2)              -------        --------->ARR11(3)           <---------GLK1(2)        <---------ICU4             <------ZmHOX2a(2)       --------->CCA1(1) --------->ARR11(3)                  <---------YAB1             <-----------ARR10       --------->RVE1(1) --------->GLK1(2)                 --------->YAB1               --------->ARR11(3) --------->RAV1(1)       <-----------ARR10         <----------DOF2 ----------------->AGL1============ ===========================MADS_MADS--------->ARR11(3)   <---------YAB1                <---------ARR11(3) --------ID1<---------------AGL15    <---------ARR11(3) --------->YAB1           ---------->DOF2   acaacaaaaatatcccaataattgcaaaatctacttgaagatttttcattctcctttcttataattaatgcccaagagagaaacaaagaagatcaaacct  10240000                                              <---------TOE2(3)                                        <---------------AGL15                                        =============================================================                           <---------ANAC58 ---------->DOF2                       <----------DOF2 --------------->AGL15                      <---------DAG2  ===============================================================                   =========================HOX2a_HOX2a                   <------ZmHOX2a(1)  ----------------->AGL3             <---------TOE2(3)    <---------ANAC58                        --------->ZAT14             --------->ANAC58     <---------ANAC58                        --------->SPL7          <---------YAB1   <---------ANAC58<---------AHL20(2)           --------->ZAT14 -->HSFB2a(1)--------->ANAC58<-----------RAV1(1)                        <---------ZAT14         ----- =========================HOX2a_HOX2a<------ZmHOX2a(2)          <-----------GT1           <---------ALFIN1   tctcaagaagttatcaaggaaggaccttttcttgttgcgatccatttaaaggtaagaccaagagtttttcattctgtacagccaattcactcacacttgc  10240100              --------------->AGL15<---------AHL20(2)       <-----------GT1             --------->AHL20(2)   --------->AHL20(2)          --------->AHL20(2)  --------->AHL20(1)    --------->ATHB12  <---------AHL20(1)   <---------YAB1<---------AHL20(2)  <---------YAB1 =============================MADS_MADS               <------ZmHOX2a(2)                      <------- =============================MADS_MADS              --------->ARR11(3)             -------->P ---->YAB1<----------DOF2 <---------WOX13(1)         <---------ARR11(3)           --------->MYB46(3)   ataatatatatactttctatatatgttgattgattatataaatttagagagtttagatcatgaaaatttgatcactggtcttgaactaccaagttataat  10240200                                                                                                    -                                                                                                    -                                             ----------->GT1                                  -------              <----------DOF2        <---------YAB1          <---------LBD16               ------>ZmHOX2a(1)           <-----------GT1      ----------->GT1           --------->GLK1(1)            <---------ARR14(2)      <---------DAG2---------->DOF2<-----------GT1      <------ZmHOX2a(1)              --------->ARR14(2) --YAB1<----------DOF2  ---------->DOF2    ---------->DOF2<---------GLK1(1)       ---------->DOF2   -   ttggacgaccttttttctttacaaaagaaagaagaagttacaattgaaagtgaaatcaggaattcgggacttctaatatacagtgaaagtatcctatata  10240300  Previous    Next  AGI:  At3g27650.1    Description:  LBD25 (LOB DOMAIN-CONTAINING PROTEIN 25). Identical to LOB domain-containing protein 25 (LBD25) [Arabidopsis Thaliana] (GB:Q8L8Q3;GB:Q75PS1;GB:Q8W1D6;GB:Q9LVX4); similar to LOB (LATERAL ORGAN BOUNDARIES) [Arabidopsis thaliana] (TAIR:AT5G63090.3); similar to LOB (LATERAL ORGAN BOUNDARIES) [Arabidopsis thaliana] (TAIR:AT5G63090.4); similar to LOB (LATERAL ORGAN BOUNDARIES) [Arabidopsis thaliana] (TAIR:AT5G63090.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14714.1); contains InterPro domain Lateral organ boundaries, LOB (InterPro:IPR004883) Range:  from: 10239783    to: 10241848    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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