Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        ------>ZmHOX2a(1)                                                          --------->TOE2(3)          --------->TOE1(3)                                                          --------->TOE1(3)          --------->TOE2(3)                                                       <-----------GT1             <------ZmHOX2a(2)                                                    <---------MYB46(3)             ==================    ---------->DOF2   <<<<<<<<<TBF1                 --------->MYB52(2)      <----------DOF2 --------->YAB1   --------->GLK1(2)           <---------ANAC58              <---------DAG2         -- ------>WOX13(1) <---------ARR11(3)           <---------ANAC58            --------->At4g35610     --- >YAB1           <---------GLK1(2)            <---------ANAC46  ------->GAMYB <-----------GT1     <--   caatcagaaagctaaacaagattcttcttcacacctaaaaaaacatttgtgtgtttgttacctcaacagcgaaatcagctttacgatccttaaacaactt  10217600                                                                                                  ---                                                                                                 ----                                                                                                 ----                                                                                             ------->GAMYB                                                                                            ---------                                                                                           ------>MYB46(1)                                                                                           ------>MYB83                                                                                          --------->MYB52(1)                                                                                         --------->AtMYB61                                                                                        --------->MYB46(3)                                                                                    --------->ANAC58                                                                                    --------->ANAC58                                                                                   --------->SPL1(2)                                                                                   --------->SPL7----                                                                                  <---------SPL1(1)                                                                                  --------->MYB52(1)                                                                                  --------->SPL1(1)                                                                                 <---------SPL7------                                                                                 <---------SPL1(2)---           <------ZmHOX2a(1)                                                   --------------->AtSPL3         <---------TOE2(3)                                                    <------------------SPL14      <----------CDC5                                                       <---------ETT(2)--------- =================HOX2a_HOX2a             --------->O2                      --------->ETT(2)--------- ------->ANAC46                      --------->ANAC58                      --------->RAP2.6(3) <----- ------>HSFB2a(2)                    --------->ANAC58                  <---------ICU4   --------->DEAR3(2) -------HSFB2a(2) ------>ZmHOX2a(1)<------ZmHOX2a(1)          ---------->DOF2------------------>SPL14   cgcgaaacgctgaggaagtccttcagtttcaacacgaggaagccaagtctcatgactcttgtaacaaaggaaaacatgacgaccgtacggaccaacggaa  10217700                                                                    <----------DOF2                                                                   <---------ANAC46                                                      --------->LBD16  <---------DOF5.7(2)                                                     <---------HSFB2a(2) ------>TOE1(2)                          --------->DAG2     --------->LBD16 ----->MYB46(3)                         ---------->DOF2    <---------LBD16 ----->DEAR3(2)                        <---------MYB52(1) <---------LBD16 >ANAC58                              --------->LBD16--------->HSFB2a(2)<---------TOE1(3) ----->ATERF1(1)                     <---------ANAC55(2)<---------ARR14(2)                   ------>NtERF2 --->ARR14(2)              ------>ZmHOX2a(2)         --------->ANAC46--------->DOF5.7(2)     -------- ------>DEAR3(1)         <---------MYB52(1)         ----------------->AG<---------TOE2(3)   --------- >ANAC58      --------->ZAT14        --------->ANAC55(2)--------->ARR14(2)                  --------- >ANAC46  <---------ALFIN1<------ZmHOX2a(2)         ----------------->AGL1                  --------- ----ARR14(2) <---------ZAT14  --------->AHL20(2)   <-----------------AGL1       <---------At4g35610   ccggcgagagtaccactgtacatctccgatcgtttaaatccgtaaagctcgtcttccgaaaccgggactgcgttaacgttctctgctacttcttccgcca  10217800                      --------->GLK1(2)                      --------->ARR11(3)                      <xxxxxxxxxxxxxxxxxsmallRNA(se3)                      <---------ARR11(3)               --------->ANAC58 ->LBD16       --------->ANAC46                       >>>>>>>>>TBF1 >ANAC46       --------->ANAC58        --------->ANAC58                               --------->YAB1 >ANAC58     <---------ALFIN1          --------->ANAC58                            --------->WOX13(1) >ANAC58    ------>ZmHOX2a(1)      --------->ANAC46>>>>>>>>>TBF1                 <---------ATHB12----   ttgaagtcttcttcctcacaccaaaatctagggtttcacagaagcaaatagaagaagaagaagagagagagttgaagaagcgaatcaatcgaaatggaga  10217900                                                                                    ------->GAMYB                                                                                   --------->MYB46(3)                                                                                   <------------AtMYB77                                                                                  -------->P                                                                         *TSS     ------>MYB46(1)                                                                        --------->At4g35610                                                                       --------->GLK1(2)                     --------->AHL20(1)                                <---------ARR14(2)      <-----                     <---------AHL20(2)                                --------->ARR14(2)      ------                     --------->AHL20(2)                               <---------GLK1(1)        <-----                     <---------AHL20(1)                               --------->GLK1(1)   -----------                    <---------AHL20(2)                           --------->ALFIN1--------->MYB52(1)                    --------->AHL20(2)                      --------->ARR11(3)   --------->MYB55(1)                <---------AHL20(2)                          --------->GLK1(2)   --------->AtMYB61           <---------YAB1                    --------->ATHB12  <-----------RAV1(1)------>MYB83 ------        <---------MYB52(1)      ---------->DOF2             <---------ARR11(3) --------->MYB46(3) ------->GT1    --------->AHL20(2)          <---------YAB1 --------->RVE1(1)   <---------MYB52(2)  <-   tgtaaatttcgttatcatttaaataaattttcgaaaaagaaacattttgatttgtgctaaaaaatctgtggggaatctgaaaccaaccgtctctcacagc  10218000                                                                                          <---------ATHB12                                                                                          --------->MYB46(3)                                                                                          <---------MYB55(2)                                                                                         --------->ANAC58                                                                                         --------->ANAC58                                                                                         ------>MYB46(1)                                                                                         -------->P                                                                                        --------->MYB55(1)                                                                                       --------->AtMYB61                                                                                       <---------MYB46(2)                                                                                       <---------MYB111(1)                                                                                       --------->MYB46(3)                                                                                       <---------MYB55(2)                                                                                       <---------MYB111(2)                                                                ----------->HVH21     --------->MYB46(3)                                                              --------->At4g35610    -------->P                                                              <---------At4g35610    ------>MYB46(1)                                                         ------->GAMYB               ------>MYB83                                                        <---------MYB55(2)          --------->MYB55(1)                                                        --------->MYB46(3)         <---------MYB59                                                       -------->P                  --------->MYB46(3)                                                       ------>MYB46(1)             <---------MYB111(2)      <------------CBF                 <---------ANAC55(2)    --------->ZAT2       <---------MYB46(2)   ------------>CBF                    --------->ANAC55(2)  <---------ALFIN1       <---------MYB111(1)  ------>NtERF2                    --------->At5g28300 ------>MYB83              ------->TEIL --------->ANAC58                  <-------GAMYB      --------->MYB55(1)      <---------ANAC58 --------->ANAC58                 <---------MYB46(3) --------->AtMYB61        <---------ANAC58 --------->ANAC46                 ----------->GT1    <---------MYB111(2)     <-------TEIL------>MYB83 ----ZAT2                         <---------DEAR3(2) <---------MYB59         --------------->AtSPL3 --->At4g35610                   <---------DEAR3(1)  --------->MYB46(3)      <---------------AtSPL3 ----At4g35610                 ------------>AtMYB77  <---------MYB111(1)   <---------GLK1(2) >HVH21                       <---------SPL7         <---------MYB46(2)    <---------ARR14(2)------>MYB83 --->ZAT2                     <---------ZAT14     <-----------GT1          --------->ARR14(2)------>MYB46(1) --------ALFIN1               ----------->HVH21<----------DOF2<---------ZAT2 --------------->AtSPL8<-   tccacgccaattgggcctgatgttatagtgactggacggttacataagtcttttaccaacccccagctcacagaatggattcgtacctaccaaccaatct  10218100                                    <----------DOF2                                <---------MYB52(1)                               <-------GAMYB                              ----------->GT1                           ------------>MYB.PH3(1)                           ------------>AtMYB77                   <---------WOX13(1)            -----                           --------->MYB52(1)                    >>>>>>>>>ARR2                  -----             <------------AtMYB77   --------->TOE2(3)           --------->ATHB12                <----            <---------At4g35610--------->At5g28300             <---------YAB1                  <-----  --------->ANAC46    ----------->HVH21----------->GT1 <-----------GT1                         ------ --------REM1(2)     --------->At5g28300    <---------YAB1  <----------DOF2                --------->AHL20(2)   ctactcgcccgtccaactgctacggtgacagacggttactttagttaaaattagataatactcttttgattgttttgaagtgtttatgctcaactaatta  10218200                            --------->AHL20(2)                     --------->ANAC58                     <---------ANAC55(2)                     --------->ANAC58                     --------->ANAC46          <------ZmHOX2a(1) <---------AHL20(2)        --------->MYB59    <---------AHL20(2)    --------->WOX13(1)     --------->AHL20(2)                                                   <----  <---------YAB1     --------->ANAC55(2)                                                       ------ ---->AHL20(2)       --------->ANAC55(1)                                                       ------ ---->AHL20(1)     <---------ALFIN1        --------->ANAC58            --------->AHL20(2)      <----- -----AHL20(2)   --------->AtMYB61         --------->ANAC58            <---------AHL20(2)<---------TOE2(3) ----AHL20(2)    <---------ALFIN1   <---------ICU4                <---------AHL20(2)    ---------->DOF2 --->AHL20(2)   --------->ANAC46<-------TEIL               <----------DOF2            <---------YAB1   aattatcaattaggaaacaccacacgtaattaaattcatttttgcaagttatattgtctgacttttattttatataaatttttagactattaaagtatta  10218300                                    <---------AHL20(2)                                   --------->ATHB51                                   --------->AHL20(2)                                   <---------AHL20(2)                                --------->YAB1                       --------->YAB1                      --------->ICU4--------->AHL20(1)                     --------->AHL20(1)                    --------->YAB1 <---------ICU4       <---------RVE1(1)        <--------HAHB4                                   --------->ANAC58      <---------GLK1(2)<---------ICU4       <----------DOF2                      --------->ANAC58      <---------ARR11(3)        <---------ICU4                         <---------AHL20(2)      --------->ARR11(3)  --------->YAB1  ---------->ID1               <---------YAB1               < -----ICU4 --------->AHL20(2)  --------->ICU4                         --------->AHL20(2)          --- --->AHL20(2)  <---------AHL20(2) <---------YAB1                    <---------YAB1          <-------- --->ICU4  <---------AHL20(2)  --------->AHL20(2)                   --------->ICU4        <---------AHL20(2) ----AHL20(2)  --------->AHL20(2) --------->ICU4                 <------ZmHOX2a(2)        <---------YAB1   attacacagatttttaattaaaaaataatgagaataattattttgtcttttttttttcacaagagggatcatttttattgagcaagtcaaatattatttt  10218400                                                           --------------->AGL15                                                           <---------------AGL15                                                          <-----------------AGL1                                                          ----------------->AGL2                                                          <-----------------AG                                                          ================HOX2a_HOX2a                                                          ------>ZmHOX2a(2)                                                         =================HOX2a_HOX2a                                                         <------ZmHOX2a(2)                                                        <---------ARR14(2)                                --------->GLK1(2)       <---------ARR11(3)                             <---------TOE2(3)          --------->ARR14(2)                             <---------YAB1             --------->ARR11(3)                             <---------TOE1(3)       <---------HSFC1(1)                        <----------DOF2              --------->HSFB2a(2)                --------->TOE2(3)  <-----------GT1    <---------ARR11(1)       <----------DOF2                 ---------->DOF2 ----------DOF2     <---------MYB52(1)        <---------DAG2   <XXXXXXXXXXXXXXXXXXXXMIR844       ---- ------->ID1    <---------At5g28300<----------DOF2   <---------HSFB2a(2)  <-----------GT1   <-------- -AHL20(2)     <-----------GT1 <---------GLK1(2)  <-----------GT1  <------ZmHOX2a(1)  ------->TEIL   gtctttacatctctaatttaccgtttcttttaagattctttttctctgcttttttctagatcccttataggaaattttactaaagatgaacattaatgtt  10218500  Previous    Next  AGI:  At3g27570.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G40510.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14698.1); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin fold (InterPro:IPR012335); contains InterPro domain Sucraseferredoxin-like (InterPro:IPR009737) Range:  from: 10215233    to: 10217973    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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