Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              ---------                                                               --------->ANAC46             ---------                                                               --------->ANAC58             ---------                                                               --------->ANAC58         --------->ANAC58                                                             <---------ALFIN1           --------->ANAC58                                                            <------NtERF2               --------->ANAC46                                       --------->AtMYB61   ------>NtERF2               <---------ZAT18                                       --------->YAB1  --------->ALFIN1          <------ZmHOX2a(2)                                       ------->GAMYB   <---------DEAR3(1)       <---------ARR14(2)                                      --------->MYB46(3)<---------MYB46(3)      --------->ARR14(2)                                    --------->WOX13(1) <---------AtMYB61        --------->AGP1                                   <---------WRKY12  <------MYB46(1)        <------ZmHOX2a(2)            ----------->HVH21     --------->WRKY18(1)<------MYB83----------------->AGL3--------->ZAT18          <---------AtLEC2 <----------DOF2          --------->ALFIN1      --------->At4g35610   ---------->DOF2      --------->GLK1(2)           <---------AtMYB61     <---------At4g35610      --   atgacaaaagtcgcatgacataagagaagcttttaagtcaaccatcagtaggggatggtggtgccactccatattcagatcagatcgagcacacaaggaa  10191200                                           <--------ATHB1                                           --------->ATHB12                                           --------->YAB1                                          <---------ATHB12                                  --------->YAB1                                  <---------ICU4 <---------ATHB51                <---------ATHB12                   <---------At5g28300  --------->ARR14(2) <---------ATHB12                <---------YAB1                    <-----------GT1       <---------ARR14(2) >ANAC58     --------->GLK1(1)   <<<<<<<<<ARR2             <---------ANAC58           <---------ANAC58 >ANAC46     <---------GLK1(1)   <<<<<<<<<ARR1             <---------ANAC46           <---------ANAC58 >ANAC58 <---------ATHB12 <----------DOF2 <---------YAB1   <---------ANAC58           <---------ANAC46 ------->WOX13(1)      <-----------GT1    --------->ICU4 <----------DOF2          <----------DOF2   <   tcaattatgcaatcgatatccaaattgactttacaatcatagcaatgatagagaaggcgcttcgtgtttttaccgcatagatggcatttcgggtctgtgt  10191300             <---------MYB46(3)                                 <----------DOF2           <-------GAMYB                            <-------GAMYB           <---------MYB52(1)                      <------MYB83<---------ANAC58          --------->LBD16                          ----------->GT1        <---------LBD16                            <------MYB46(1)     <---------At4g35610                           --------->MYB55(2)     --------->ZAT2                                <---------MYB46(3)                      <---------ANAC46     <---------GLK1(1)                            --------->ALFIN1                         <---------ANAC58     --------->GLK1(1)                            <---------AtMYB61                        <---------ANAC58     <---------ZAT2                      <---------YAB1        <---------ANAC58  <---------ARR14(2) <     --------->At4g35610               --------->YAB1<---------WOX13(1)       --------->ANAC58      -   <------ZmHOX2a(1)                   <---------ICU4<--------P<---------ANAC46  --------->ARR14(2) - -----------RAV1(2)<---------GLK1(2)  <---------ATHB12  <---------GLK1(2)     --------->ANAC58   <---   gatcaggagctccggttgtcagaaactcaagactatgcccatcatgagaagggtggttgattctcgcttgtatgttgaacacgaatacacatttcttgtg  10191400                                                                                    --------->CCA1(2)                                                                                   --------->ARR14(2)                                                                                   <---------ARR14(2)                                                                                <---------ANAC46                                                                              <-----------HVH21                                                   --------->ANAC58        <---------DOF5.7(2)                                            --------->ATHB12             --------->DOF5.7(2)                                           ------>ZmHOX2a(2)            --------->TOE2(3)                                        <------ZmHOX2a(1)           --------->TOE1(2) ---------ANAC46                      --------->SPL7                --------->TOE2(3) ---------->GT1                       <---------TOE1(2)       --------->YAB1<---------TOE2(3) -------->YAB1   <---------ALFIN1   <---------SPL7 --------->ANAC58 --------->TOE2(2)<-------TEIL ------CCA1(2)  --------->ANAC46<---------ALFIN1   --------->ANAC46<---------HSFB2a(1)  --------->ANAC46   tatcgtaaacttgcattcaccacatgagtagccatcaccgtaggatcgattgcaagcatcgcattcaaaaccttcgttaacgtcggatacacgatgctcg  10191500                                  --------->At4g35610                                  <---------At4g35610                                            ----                               <---------MYB52(1)                                                ----                              <-------GAMYB                                                      <---                             <---------MYB46(3)                                                 <----                            <---------RAP2.6(2)                                                 -----                            <---------ANAC46                 <-----------RAV1(1)                <----                            <---------ANAC58                <---------YAB1                    -------                            <---------ANAC58             --------->AHL20(1)                   <------                       <-----------RAV1(1)               <---------AHL20(2)                  --------     <---------HSFB2a(2)   <---------LBD16               --------->AHL20(2)     *TSS  <---------ANAC46     --------->HSFB2a(2)<-------GAMYB   <XXXXXXXXXXXXXXXXXXXMIR394A/B --------->AHL20(2)   --------->YAB1  ------>ZmHOX2a(1)    <---------MYB46(3)                <---------AHL20(1)   <----------DOF2<-------   tgtccttctagcacataagtcatggctgttgcggttagcagagatggagagaatgcaaatttattgttggaataaaatcactttggttttgtgtaataat  10191600                                               --------->WRKY12                                               --------->WRKY38(1)                                              --------->DOF5.7(2)  <---------DEAR3(2)                                             --------->TOE1(3)  ------->PIF5      <---------YAB1                  <---------ANAC46          <-------PIF5   ------------>CBF                  <---------TOE2(3)         <---------TGA1a   <------ZmHOX2a(2)               ----------->TGA1            --------->ANAC58 ----->YAB1                     --------->ARR14(2)             --------->ANAC46 ---->HAHB4                     <---------ARR14(2)             =================================bZIP_DOF ------ICU4                  --------->YAB1<---------TOE1(3)   --------->bZIP60(2) -----YAB1                  <---------YAB1<---------DOF5.7(2)  --------->ANAC58 ---->ICU4                --------->YAB1--------->DOF5.7(2)    --------->TGA1a -----ATHB51             <---------AHL20(2)<---------TOE2(3)   <---------O2 -->YAB1             --------->YAB1----------->HVH21           --------->O2 ---ICU4             --------->AHL20(2)--------->TOE1(3)    <---------PCF2           ---------->DOF2 ->ICU4              <---------AHL20(2)--------->TOE2(3)  --------->ZAT18       <---------AHL20(2) --YAB1      <---------MYB46(3)<---------CCA1(2)          <---------ZAT18       --------->AHL20(2)   aatggatcaatatagttgttcatttatattatcatatctgacgttaacgttgacaactagtgggcacgtcgctaccattcgtttaatttaagcactattt  10191700             <----------CDC5            --------->LBD16                                          --------->AHL20(2)           --------->ANAC58                                <---------AHL20(2)           --------->ANAC58                               --------->AHL20(2)          <---------LBD16                                 <---------AHL20(2)                     ----     <---------WOX13(1)                               <---------AHL20(2)                        -----    <---------ANAC58                                  --------->AHL20(2)                        <----    <---------ANAC58                                 <---------AHL20(2)                         -----   --------->ATHB12                                  --------->AHL20(2)                         <----  --------->ICU4               ----------->GT1       --------->AHL20(1)                  ---------->DOF2  <---------YAB1         ------->TEIL                <---------AHL20(1)  <-----------RAV1(1)  -------   agtattgattgtcccgctaagtttgtgtatgtcatgttaatttgtttatttcaaatttaattaaataacaaaaaaatgttgccctcaaggtaaaagaaga  10191800          <---------YAB1         --------->AHL20(1)         <---------AHL20(2)         --------->AHL20(2)         <---------AHL20(1)        --------->YAB1       <---------YAB1     --------->YAB1                        <---------------AtSPL8    <---------YAB1                       --------->ATHB51                                   <-------- ----->CCA1(2)          <---------MYB52(1) --------------->AtSPL8       --------->AHL20(2)  --------- ---->ARR14(2)     <---------ARR14(2)    <---------ICU4           <---------MYB59         --------->ARR11(3) -----ARR14(2)     --------->GLK1(2)    --------->ICU4     --------->AHL20(2)             <---------AHL20(1) ---->ARR11(3)     --------->ARR14(2)   <---------YAB1 <---------AHL20(2)      <---------MYB52(1) <-- -----ARR11(3)    --------->GLK1(1)   --------->YAB1   --------->AHL20(2)<---------AHL20(2)<---------CCA1(2) ---->ARR10       <---------GLK1(1)<----------DOF2 <---------YAB1 --------->TOE2(3)       <---------ARR11(3)   tttgatatcattataatgggaaatctgtttttttatactttcataattgtactatgtttaaatttatacctaaattatatcgttgtttagaatatatctc  10191900                                   ------>ZmHOX2a(1)                                   --------->HSFB2a(2)                                 ==================================HOX2a_HOX2a                                 ------>ZmHOX2a(2)                                <------ZmHOX2a(2)                                ===================================HOX2a_HOX2a                               --------->AGP1                               <---------ARR14(2)                               <---------GLK1(2)                               --------->ARR14(2)                               <---------ARR11(3)                               --------->ARR11(3)                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                         --------->ARR14(2)                         <---------ARR14(2)                      <---------ANAC58                   --------->GLK1(1)                   <---------GLK1(1)                  --------->ARR14(2)          <---------ZAT6                  <---------ARR14(2)        ----------->GT1                 <------ZmHOX2a(1) <---------HSFB2a(2)  <---------ARR11(3)  <---------ANAC58   <xxxxxxxxxxxxxxxxsmallRNA(i)  --------->ARR11(3)  <---------ANAC46---------->DOF2             --------->YAB1 -ARR11(3)       ======================HOX2a_HOX2a               <---------YAB1         ----------->TGA1 >ARR11(3)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)        <------ZmHOX2a(1) --------->ANAC46 -------At4g35610=======================HOX2a_HOX2a      <---------LBD16    <-----------GT1     <xxxx   agaagataatgtgtatgcaggatttcgtatacagatcctcgaaagagagtgataagttttcaggattatgatggttttatacatcatcaaatgacgaaac  10192000                                                                                             <xxxxxxx                                                                                         <---------ZAT14                                                                                         xxxxxxxxxxxx                                                                                         xxxxxxxxxxxx                                                                                     xxxxxxxxxxxxxxxx                                                                                     xxxxxxxxxxxxxxxx                                                                                     ------>ZmHOX2a(2)                                                                                     <---------DEAR3(1)                                                                                     xxxxxxxxxxxxxxxx                                                                                    xxxxxxxxxxxxxxxxx                                                                                    <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                                    xxxxxxxxxxxxxxxxx                                                                                    xxxxxxxxxxxxxxxxx                                                                                  xxxxxxxxxxxxxxxxxxx                                                                                  --------->ATHB12                                                                                 <---------YAB1xxxxxx                                                                                 xxxxxxxxxxxxxxxxxxxx                                                                                 xxxxxxxxxxxxxxxxxxxx                                                                                 xxxxxxxxxxxxxxxxxxxx                                                                                xxxxxxxxxxxxxxxxxxxxx                                                                               xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                               xxxxxxxxxxxxxxxxxxxxxx                                                                             xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                           xxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                                                                          xxxxxxxxxxxxxxxx>smallRNA(s)                                                                          xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                                         xxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                        xxxxxxxxxxxxxxxx>smallRNA(s)                                                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                       xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                       xxxxxxxxxxxxxxxx>smallRNA(s)                                                                      xxxxxxxxxxxxxxxx>smallRNA(i)                                                                      xxxxxxxxxxxxxxxx>smallRNA(s)                                                                     <---------DEAR3(1)  xxxxxxxxxxxx                                                                     xxxxxxxxxxxxxxxx>smallRNA(i)                                                               xxxxxxxxxxxxxxxx>smallRNA(i) xxxxxxxxx                                                              xxxxxxxxxxxxxxxx>smallRNA(s)  <--------                      <---------ANAC46                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)  ---                     <---------LBD16                        xxxxxxxxxxxxxxxx>smallRNA(i) --------->ZAT14              <---------MYB52(1)                           xxxxxxxxxxxxxxxx>smallRNA(s) xxxxxxxxxxxxx             --------->At5g28300                           xxxxxxxxxxxxxxxx>smallRNA(i) xxxxxxxxxxxxx            ----------->GT1                              <---------ARR11(3)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)           <------NtERF2                       ---------->DOF2xxxxxxxxxxxxxxxx>smallRNA(i)<xxxxxxxxxx          <---------At4g35610               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)xxxxxxxxxxxxxxxxxxxx         <---------DEAR3(1)          ------>ZmHOX2a(1)   --------->ARR11(3)<---------ANAC46<xxxxxxxxx        --------->ZAT18--------->LBD16 --------->ANAC46 <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<xxxxxx xxxxxxxxxxxxxxxxxxxsmallRNA(le3)  xxxxxxxxxxxxxxxx>smallRNA(i)<----------DOF2xxxxxxxxxxxxxxxxxxxxxxx   atcaagtatgggcgctgttaatctccgtagaagtctctcctactccatcaaaagtcgaagctcttctttgggcgatgaagtgtatgatcggtgcagataa  10192100  Previous    Next  AGI:  At3g27510.1    Description:  protein binding / zinc ion binding. similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G27473.1); similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G27500.1); similar to DC1 domain-containing protein [Brassica oleracea] (GB:ABD65623.1); contains InterPro domain C1-like (InterPro:IPR011424); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain DC1 (InterPro:IPR004146) Range:  from: 10189458    to: 10191580    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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