Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           --------->TGA1a                                                         <---------O2              --------->MYB52(1)                         --------->O2              ------->TEIL                            --------->DEAR3(1)             --------->ARR14(2)                       --------->TOE2(2)             <---------ARR14(2)                       =============MYC_MYB    --------->HSFC1(2)               ------>ZmHOX2a(2)------->GAMYB    <---------HSFC1(2)   --------->ANAC58          --------->MYB52(1)    <---------ZAT2       --------->ANAC46        <---------MYB52(2)    --------->ZAT2       --------->ANAC58   ----------->GT1 --------->LBD16      --------->ARR14(2) <----------DOF2 <---------TGA1a                        ----- ---------ANAC58 ----------->GT1    <------ZmHOX2a(2) --------->TOE1(2)                         ----- ---------ANAC58 --------->LBD16   <---------ARR11(3)--------->DEAR3(2)                        <----- -------->ANAC55(2)   <---------ARR14(2) ==========================bZIP_DOF  <------ZmHOX2a(1) <----- ------DOF2<---------MYB52(2)      --------->ARR11(3)--------->MYB46(3)    <---------TOE2(3)  <------   ttccgtagcttcgacgaaccggagaaaacgcaaatgagatcgtcttttgtaaataaccgacgagactgagggtattttaggaaaaccagagtttgttcag  10121500                            --------->DEAR3(1)                           <---------LBD16                          --------->MYB52(1)                             ------->GAMYB                         --------->ANAC46                 --------->DEAR3(1)                         --------->DEAR3(1)               ------->GAMYB --------->MYB46(3)                        --------->MYB46(3)                --------->RAP2.6(2)                        <------------AtMYB77             --------->MYB46(3)   <---------MYB52(1)                      --------->MYB52(1)                 --------->DEAR3(2) <---------MYB46(3)                      <---------ARR14(2)              ---------->DOF2  ---------->DOF2          <----------DOF2------->GAMYB             --------->LBD16  <---------RAP2.6(3)     <---------At5g28300--------->DEAR3(2)        <---------ANAC55(2) --------->MYB52(1)    <-----------GT1   --------->ARR14(2)          --------->ANAC46  --------->At5g28300           --- ---->ANAC55(2)    --------->YAB1                 --------->ANAC58  --------->LBD16               <-- ------>GT1      ------->TEIL--------->LBD16      --------->ANAC58 --------->ANAC55(2)            --- ----TOE1(3)  --------->ANAC58                    --------->ANAC55(1)----------->HVH21            --- ----TOE2(3)  --------->ANAC58                   <---------LBD16   <---------ANAC58            <----- -----RAV1(2) --------->ANAC46<------NtERF2     --------->MYB52(1) <---------ANAC58 --------->GLK1(2)   gtaatttcaccgcttcacgaatcgtaaccgccggagaagacgatatagactcacggaaaaccgcccttgccgtaacagccgttgagaagcttatcgtcga  10121600              <---------HSFC1(2)              <---------HSFB2a(1)          --------->ANAC58          --------->ANAC58       <---------SPL7       --------->LBD16      <---------MYB55(2)      --------->MYB46(3)     <---------LBD16    --------->MYB52(1)                                                                      ------>NtERF2   <---------ALFIN1                                                                         <------NtERF2   --------->AtMYB61                                                                       --------->RAP2.6(2)  --------->DEAR3(2)                                                                    <---------SPL7  --------->MYB46(3)                                                             ---------->DOF2-----  <---------MYB55(2)                                                         ------->TEIL  --------->ANAC58 ------->TEIL<-----------ARR10                                            --------->ANAC58 --------->ANAC46 ------>MYB46(3)                                                  --------->YAB1 ==================== -------MYB52(2)             --------->AHL20(2)                 --------->MYB52(1)     --------->HSFB2a(1) ------>ANAC58--------->HSFC1(2)                           <----------ID1 --------->ANAC58 --------->ANAC58 ------>ANAC58--------->HSFB2a(1)     <---------ANAC46 <------ZmHOX2a(1)  --------->ANAC46--------->SPL7 ----SPL7--------->SPL7    --------->YAB1          --------->TOE1(2) <---------GLK1(2) <---------HSFB2a(1)   acgaaccaccggacgaaacttccccttaaaaataaacatggtggagaagagaacgaaggagaagacaaacagaatcacgaaccaaaagaacgtccgccat  10121700                         --------->AtMYB61                        --------->MYB46(3)                     <---------MYB55(2)                 <------NtERF2                 ------>NtERF2                 --------->LBD16                --------->RAP2.6(2)                --------->RAP2.3(2)                --------->RAP2.3(3)                --------->RRTF1(2)                                     <---------ATERF1(2)                --------->RRTF1(3)                                     --------->DEAR3(1)                --------->ANAC58                              --------->RAP2.6(2)                --------->ANAC58                              --------->DEAR3(1)                --------->ANAC46                             <------NtERF2<---------ANAC46                --------->DEAR3(1)                           --------->RAP2.3(1)               --------->RAP2.3(1)                          --------->At4g35610               --------->RRTF1(1)                           --------->ABI4(1)              --------->LBD16                               ------>NtERF2<------NtERF2              <---------ATERF1(1)                           --------->LBD16              ------>NtERF2                                 <---------ATERF1(1)              --------->At4g35610                          <---------DEAR3(1)             --------->ANAC46                              --------->RAP2.3(3)             --------->DEAR3(1)                            --------->RAP2.3(2)            --------->ATERF1(1)                           --------->ERF1 --------->RAP2.3(1)           <---------ATERF1(1)                            --------->ORA47(2)          --------->ARR14(2)                              --------->RAP2.3(1)          <---------ARR14(2)                              --------->ATERF1(1)       --------->O2  --------->MYB46(3)                   --------->RAP2.6(1)       <---------O2 --------->ANAC58                     <---------RAP2.3(1)       --------->TGA1a--------->AtMYB61                  ------>NtERF2 --------->ATERF1(2)       =======================MYC_MYB                    <---------ATERF1(1)       ================================================bZIP_DOF  --------->ARR14(2)       <---------TGA1a------->GAMYB              <---------At4g35610  <---------LBD16       ======================MYC_MYB  <---------TOE1(2) --------->ANAC46<---------ATERF1(1)      <-----------------------TaNAC69(2)    <----------DOF2--------->DEAR3(1)     ------->GAMYB  --------->ANAC58 ------>ZmHOX2a(1)  --------->ANAC58------>NtERF2  --------->MYB52(1)-------->P      --------->TOE2(2)   --------->ANAC58--------->LBD16 ---->AtLEC2<---------LBD16         --------->TOE1(2)  --------->SPL7 --------->ATERF1(1)          <- ================bZIP_DOF<---------ALFIN1 ------->TEIL------>ZmHOX2a(1)<---------DEAR3(1)      ------   gaaacaacgacgtctccgccgcaaccaccaccaagtttcctacgaactttcatctcctacgccgccgaaatcgccggcgtaatggattagagaagaaatt  10121800                                               <---------WRKY38(1)                                               <---------WRKY12                                     <                                               <---------WRKY45                                     <                                              --------->WRKY18(1)                                 ---                                             <-----------HVH21                             <---------MYB52(1)                        <-----------GT1     --------->LBD16                               --------->TOE2(3)   <---------AHL20(2) <----------DOF2     <---------LBD16            <---------YAB1      --------->ANAC55(2) -----------------------ANAC81        <----------DOF2  <-----------------AGL2           <---------TOE2(3) --->GLK1(2)       <-----------GT1<---------GLK1(2)  --------->GLK1(2)            *TSS <-----------GT1   ctgttttaattttgttctgtttttctttacttctctgattcttttccggtcaaagtttctggttttggatgatgagaagagttttgaatttacgttattc  10121900                                                            <---------SPL7                                                           ===========================bZIP_DOF                                                           <---------ANAC58                                                           <---------ANAC46                                                           <---------ANAC58                                                           <---------TGA1a                                                           <---------ANAC55(1)                                                         <---------TGA2(2)                                                        ----------->TGA1                                                        ------>ZmHOX2a(1)                                                        ----------->HVH21             ------------>CBF    ----------->GT1      ----------->RAV1(2)             --------------->AGL15           --------->AHL20(1)             <---------------AGL15           --------->AHL20(2)      ---------->ID1            --------->DAG2    <---------AHL20(2)                         <-------    <-----------RAV1(1)        --------->DAG2<---------AHL20(2)            ---------->DOF2<---------- ----------DOF2               ---------->DOF2<---------AHL20(1)         <---------YAB1   --------->DAG2 ---------DAG2                =======================================bZIP_DOF     ----------->GT1 --- --->ZmHOX2a(1)          >>>>>>>>>TBF1      --------->AHL20(2)       --------->GLK1(2)  ---------->DOF2   ctctttttgttgtttctcaattaagaagaagaaaaaggtaacaaaattttatttattcctgacgtatgaagaatatgaaaagagaagaaaaaaagttacg  10122000                                                                        --------->ARR14(2)                                                                        --------->ARR11(1)                                                                        <---------ARR14(2)                                                              --------------->AGL15                                                              <----------DOF2                     <---------RAP2.3(3)                      <---------DAG2                     <---------DEAR3(1)                       <---------------AGL15  <---------DAG2                     <---------RAP2.3(2)                     <---------ANAC58        <----------DOF2                    --------->RAP2.6(3)                      <---------ANAC58     <-----------GT1         <------ZmHOX2a(1)                             <---------AHL20(2)     ------->TEIL   <---------HSFB2a(2)                                 --------->AHL20(2)--------->CCA1(2)   --------->HSFB2a(2) --------->At4g35610          <---------ICU4     <------ZmHOX2a(1) ----GT1----------->GT1<---------At4g35610       --------->YAB1      <---------TOE1(3) -----AtSPL8    ---------->DOF2                 <------ZmHOX2a(2)    <---------TOE2(3) ---->TEIL----------->GT1                       ==============================HOX2a_HOX2a   ---------   aacttggagaaggagaaaaaaagacggctcactaaaacaattggtctccgatcatatttatttgcttttttaaggatacgaattttactttttgttgacg  10122100                      <---------TOE2(3)                    ----------->HVH21                                                               <              <----------DOF2  --------->YAB1                                                       -    --------->DOF5.7(2)<---------ANAC46                                                        ------  <---------ANAC46<----------DOF2     ----------->GT1                           <------ZmHOX2a(1)   < -->HVH21 <---------ZAT14      ----------->GT1           ----------->RAV1(1)   ----------->GT1 ------   gttttcgtttacttcactttctttgacgttgaatagtaagtagtttaatacaacaacaacaacaaaaatatgtagtttagtaggaaaaaacaaaaaaaaa  10122200        <---------ANAC58        <---------ANAC46                                                                          ---        <---------ANAC58                                                       <---------ANAC58   ---        --------->ANAC55(2)                     <---------YAB1        <---------ANAC58    <----------DOF2        <---------ANAC55(1)                <----------DOF2            <---------ANAC58   <---------ANAC58    <----------DOF2                    <---------RAP2.6(2)<---------ANAC58     ----------->GT1    --- ---------GLK1(2)                     --------->RAP2.6(3) <---------ANAC58     <---------ANAC46 <---- -------->ARR14(2)                   <-----------GT1     <---------TOE2(3)     <---------ANAC58------ --->MYB52(1) <---------AHL20(2)--------->ARR11(3)      <-----------GT1 <---------MYB52(1)<---------DAG2 ---------ARR14(2)              <---------ARR11(3)   <---------ICU4  ----------------->AG<---------ANAC58 ------>MYB.PH3(1) <-----------GT1 <----------DOF2 ------->TEIL    <-----------GT1     <-----------GT1   cggatactttgcgtgtttatttttcatgttgtaagttctttacggcttttatgaatttttacgtttgattttccgtttgaggcgtgattttgctttacct  10122300                                             <-----------RAV1(2)                                             <------NtERF2                                            --------->LBD16                                            --------->At4g35610                                    <-                                            <---------At4g35610          <---------ICU4           ---    <---------TOE2(3)                       <------NtERF2                --------->YAB1          ----   ---------->DOF2                         ----------->RAV1(1)   <---------ATHB12                ---- ------>WRKY45                             --------->RAP2.6(2) ------>MYB46(1)                   <--- ------>WRKY38(1)                    <---------ICU4            ------>MYB83                   ------- ------>WRKY12          <---------ICU4    <---------RAP2.6(2)<---------MYB59                 -------- ------DOF2      ----------->GT1    --------->ICU4        <------ZmHOX2a(1)            -------------- --->TOE2(3)   <---------MYB52(1)   <---------YAB1      --------->MYB59 <---------ATHB12   ------>ZmHOX2a(1)   ttgactaaagttagaccagtagttaataactactagttattatggccgcagaagttattaggacctaatcactaatcagcacttagttctctccttacga  10122400  Previous    Next  AGI:  At3g27330.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G40720.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14626.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Protein of unknown function DUF23 (InterPro:IPR008166); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 10118187    to: 10121882    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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