Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             <---------MYB52(1)                                                    <---------ANAC58                      <---------At4g35610           <---------ANAC58             --------->YAB1                        <---------ICU4             --------->MYB52(1)                   <---------YAB1        <---------ATHB12               <------ZmHOX2a(1)  <---------RAP2.6(3)         <---------ANAC58       --------->ANAC58      ----------->RAV1(1)--------->YAB1                        <---------ANAC58       --------->ANAC58 ------->GAMYB ----------->GT1   ---------->ID1                <---------ANAC46 ----------->RAV1(1)  --------->At4g35610      <---------ATHB12                      ---------->ID1   gcccaacacaatcaataacagttcaactgaacaacatatgaggaaacaaatcatacttgccgttttgctatcgactacaaacttcatgtcgtttttcatt  10068500                                           <---------ARR11(3)                  --------->GLK1(2)     --------->AHL20(2)                 <---------ARR11(3)<---------AHL20(2)                 <---------AHL20(2)                 <---------GLK1(2) --------->AHL20(2)                 --------->AHL20(2)            --------->MYB46(3)     <---------AHL20(1)                <---------ATHB12           -------->P              --------->AHL20(1)       --------->ANAC55(2)    <---------ICU4<---          --------->MYB52(1)    --------->AHL20(2)          <---------O2         <---------TOE2(3)        <---------MYB52(2)      <---------AHL20(2)          --------->O2         <---------TOE1(3)     --------->ZAT18            --------->AHL20(1)          --------->TGA1a     <---------DOF5.7(2)     <---------ZAT18            <---------AHL20(1)--------->ANAC46 --------->WOX13(1)           <----     <---------ZAT14      ----------->GT1  --------->ARR11(3) ----------->HVH21 --------->MYB52(1) <-     --------->ZAT14    <---------ANAC46<---------AHL20(2)  <---------TGA1a   --------->DOF5.7(2)----   tagctagtgaactaaccaagattctagagtgtaataaaatattaaaatctataggcaaactcacatgaccaattaaacaagttaacgattactgtccaat  10068600                                                    --------->TOE1(3)                                              --------------->AtSPL3                                      --------->TGA1a--------->DOF5.7(2)                                      --------->O2  --------->TOE2(3)                                      <---------O2------->TEIL           <---------AHL20(2)         <---------TGA1a<---------MYB52(1)        ----------->GT1      --------->AHL20(1)   <-------TEIL  <-----------TGA1           <---------AHL20(2)   <---------TOE2(2)  <-----------HVH21          <---------AHL20(1)   <---------TOE1(2)        --------->LBD16 --------->ANAC58            --------->ARR11(3)   --------->SPL7         <---------LBD16 --------->ANAC58         --------->AHL20(2)  <---------------AtSPL3     --------->LBD16         <--- --------->ANAC46       <---------MYB52(1) <------ZmHOX2a(1)         <---------ARR14(2)      <------- ------AHL20(2)        <-------GAMYB  --------->ANAC58               --------->ARR14(2)     <-------- -----ATHB12           =========================MYC_MYB        ----------->GT1             --------->WRKY38(1) ----------GT1        ----------->GT1 --------->ANAC58    --------->AHL20(2) --------->RAP2.3(3)<---- ----->AHL20(2)     <---------At5g28300   ----------->HVH21<-----------GT1--------->ANAC46 --------->WRKY12   taaacgtcacaagttaattttctaccgttaaaatattgccacgtaggacgcgtacgttaattaactcgtaaaatccgcgcagacaaaatcacattgaccg  10068700              ------>NtERF2              <---------ERF1              <<<<<<<<<AtERF-4              <---------MYB46(3)              <<<<<<<<<AtERF-1              <<<<<<<<<AtERF-3              <<<<<<<<<AtERF-2              <<<<<<<<<AtERF-5              <---------RAP2.3(1)             <---------RAP2.3(2)             <---------ANAC46             <---------RAP2.3(3)             <---------RAP2.6(2)             <---------ATERF1(2)             --------->ATERF1(2)                                          --------->ZAT14           <       --------->ARR11(1)                                                 <---------ZAT14           -  --------->CCA1(2)       --------->WOX13(1)                       ----------->HVH21                < --------->ARR11(3) <---------ARR11(3)    --------->SPL7        <----------DOF2                     - ------MYB52(1)<------NtERF2 --------->YAB1                  xxxxxxxxxxxxxxxxxx>smallRNA(si3)      -- --At5g28300 <---------DEAR3(1)         <-----------HVH21    <------MYB83--------->ALFIN1          <- -WRKY18(1) <---------LBD16 <---------ATHB12                 <------MYB46(1)         <---------AHL20(2) ---GAMYB   --------->RAP2.6(3)     <-----------GT1        <--------P <---------DEAR3(1)       ------   ttagatatagatttggcggctagttcttcaatcaatataaaccgtccgtcaaaaatcagaggtaggcttttgacggtgtagttttattttaaaaacataa  10068800           --------->ANAC58           --------->ANAC58       <---------ZAT6 ---------AHL20(1)                                                                      ------>ZmHOX2a(1) -------->AHL20(1)                                                         *TSS       ----------->RAV1(2) ---------AHL20(2)                                                         --------->ANAC46 -------->AHL20(2)     <-----------GT1                                     --------->ANAC58         < ------->AHL20(2)    <-----------GT1                          <---------DAG2     --------->DAG2   <-- --------AHL20(2)<----------DOF2                              <----------DOF2   ---------->DOF2 ----- --->AHL20(2)    <---------DAG2             --------------------->WRI1     --------->ANAC58  <-------   aataaattagtgtaagaaacttttttctctctctctgagtcttcgacttcgtttttatctccagctttttttttctcacgcgaaaagctcctgttcttta  10068900                                                                        <---------ARR14(3)                                                                        --------->ARR14(2)                                                                        --------->GLK1(2)                                                                 ----------->GT1                                                                 <------MYB83            --------->LBD16                                                               <--------P               <---------ANAC58                                                              <-------GAMYB             --------->ANAC55(2)                                                             <---------MYB46(3)         <---------ANAC55(2)                                <---------ANAC46            <---------AtMYB61           <---------ANAC46 <---------ARR14(2)             <---------ANAC58 --------->GLK1(2)      --------->ARR14(3) --------->ARR14(2)             <---------ANAC58<---------GLK1(2)<------MYB46(1)        <---------ANAC58 ------ZmHOX2a(1)            <---------GLK1(1)  --------->ARR14(2)      <---------ARR11(3)          < -------TOE2(3)     <---------TOE2(3)           <---------ARR14(2)      --------->ARR11(3)     ------ ----->DOF2         <---------TOE1(3)        --------->HSFB2a(2)<---------MYB46(3)  <-----------HVH21 ---DOF2           <-----------RAV1(2)       <---------HSFB2a(2)<---------AtMYB61   <---------SPL7 <-   aaggatttgatcacgagagtttcaggtttggatttcgtagtcaatttccagattctagggttttggttggtcaaaatcttctacttcgtcccgtgtttgt  10069000             ------>ZmHOX2a(2)            <------ZmHOX2a(2)           ------->TEIL           <---------ARR11(3)           <---------ARR14(2)           --------->ARR14(2)           --------->ARR11(3)           <-----------ARR10          <---------CCA1(2)        --------->ANAC58        --------->ANAC46        --------->ANAC55(2)        --------->ANAC55(1)        --------->ANAC58                                                                            -       <---------LBD16                                                                              =  <---------MYB46(3)      --------->LBD16                                                       -----  <------MYB83<----------DOF2                                        <-----------GT1--------->AHL20(2)  <------MYB46(1)       ----------------->AGL1                    <---------------AtSPL8        ----- <---------AtMYB61    --------->GLK1(2)                           --------------->AtSPL8     <------- ---------WOX13(1)    <---------ARR14(2)      <---------YAB1      <---------------AtSPL3<---------ICU4 ----------------->TaNAC69(2)       <------NtERF2         ----------->GT1  <----------DOF2  <-------- --------ARR14(2)    <---------ARR14(2)    <---------YAB1<---------ANAC46 <---------MYB52(1)<--------   ggattggttcacggatctttggagattccgaaattggaggcgatttttattctagggtttcggtgaaatttgtaccgttttttggattaattcttacgtt  10069100                      <---------ANAC46                 --------->ZAT2                 <---------At4g35610 ----->ZmHOX2a(2)<---------ZAT2                    --------->REM1(2) =================HOX2a_HOX2a                    --------->LBD16                    <---------MYB46(3) ---->WRKY12  <---------ANAC58                  <---------ANAC46                   <---------AtMYB61 ---->WRKY38(1)  --------->At4g35610        --------->ZAT2                      --------->ALFIN1 --ANAC46     <---------ANAC58              <---------ZAT2                   <-----------RAV1(1) -TOE2(3)  ------>ZmHOX2a(1) <---------TOE1(3)  <---------ANAC58        <---------AHL20(2) -TOE1(2)----------->RAV1(2) <---------TOE2(3)  <---------ANAC58  <---------At4g35610<-------GAMYB   gatcgcttctctcctggcgagctcgcgtttaaaggtttagatttcaagctccgtgttgtctattttgaagctaatttatctggtggaggttgaattttgg  10069200                        <-----------RAV1(1)                      <---------ZAT2                      --------->At4g35610                      <---------At4g35610                    ================RAV                    <-----------RAV1(2)                 >>>>>>>>>GATA-4                 >>>>>>>>>GATA-3                <-------TEIL                 >>>>>>>>>GATA-1               --------->CCA1(2)                 >>>>>>>>>GATA-2               --------->ARR14(1)                           ---------                 --------->ARR14(2)           <---------ARR14(2)                        --------->YAB1                 <---------ARR14(2)           --------->ARR14(2)                        <---------ICU4            <---------ANAC46                  <---------GLK1(2)                         --------->ATHB12            <---------ANAC58            ----------->GT1                                <---------ATHB12            <---------ANAC58      <-------TEIL--------->ARR11(1)            --------->TOE2(3)   -----       --------->GLK1(2)<---------MYB46(3)  ----------->ARR10--------->ATHB12          --------->ICU4   tttgtgaagaatttgtgtggattcagctgttggagattcaaatggtaagattcgatctatttttgatttgtgggtttttcttaattcgaatgattagaaa  10069300                                                                                     <-----------GT1                                                                                  <---------ICU4                                                                              <---------AHL20(2)                                                                       ---------->DOF2<---------At5g28300                                                                       --------->MYB52(1)                                                                    --------->At4g35610       <------        --------->ATHB12   <---------STY1(2)                        <---------At4g35610       ------- -->GT1<-------TEIL       --------->ANAC58              --------->ANAC58  ----------->GT1<-----------HVH21 ---->AHL20(2)            --------->ANAC58              --------->ANAC58 <---------TOE2(3)   <-------   aaatagagattcatttgaatttggcatcaagctagggtttgagttttggggtccaaaaacgaaattggacagctaaaggtttaatttttacggtcatatc  10069400  Previous    Next  AGI:  At3g27260.1    Description:  GTE8 (GLOBAL TRANSCRIPTION FACTOR GROUP E8); DNA binding. similar to ATBET9 (ARABIDOPSIS THALIANA BROMODOMAIN AND EXTRATERMINAL DOMAIN PROTEIN 9), DNA binding [Arabidopsis thaliana] (TAIR:AT5G14270.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14610.1); contains InterPro domain Bromodomain (InterPro:IPR001487) Range:  from: 10068875    to: 10073898    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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