Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 ------>ZmHOX2a(2)                               --------->ARR11(3)                               <---------ARR11(3)                               <---------AHL20(1)         <-------TEIL                               --------->AHL20(1)         ------->TEIL                        ==============================HOX2a_HOX2a                                  <-                        =============================HOX2a_HOX2a                                   --                       --------->TOE1(3)      <------ZmHOX2a(2)            ------->TEIL            --          <-------GAMYB--------->TOE2(3)     <---------ARR11(3)         ----------->GT1    ----------         ----------->GT1------>ZmHOX2a(1)    <---------AGP1           <---------ANAC46    <---------WOX13(1)     ------->TEIL--------->AHL20(2)          --------->ARR11(3)     <-----------HVH21 <---------WOX13(1)   atcgatggatgtggttatataaaatccttagaaaatattcttctatagatctcacatatgtacatatatgtgtcatgtatatagactgactgactgacat  10062400                <---------At4g35610                --------->At4g35610              --------->MYB46(3)            <-----------HVH21         ------->TEIL       <---------SPL7----------->HVH21      <---------ANAC58   ------->MYC3                           --------->ANAC58      <---------ANAC58  --------->ANAC58                        --------->ANAC58                  <--      --------->ANAC55(2)<-------MYC3                          --------->SPL7                    <---     --------------->AtSPL3  --------->SPL7              --------->ANAC55(2)                     <---     <---------TOE2(3)<---------ALFIN1                  <-------TEIL                           <----- --------AHL20(1)   <---------ALFIN1                  <---------ARR14(2)                 <---------ARR11(3) ------->AHL20(1)  --------->ANAC46                   --------->ARR14(2)  <---------YAB1 --------->ARR11(3) ------->ARR11(3) --------->DEAR3(1)               <---------------------WRI1<---------WOX13(1)------ ->HVH21 --------->SPL7 --------->ANAC58      ------->TEIL   <---------SPL7--------->ATHB12------>ZmHOX2a(2)   atatattgacgtaccatcagccccccacgcgtaccatagacatagatgtatatggcgatacgtcgtaagacatggtatgattgatcaacatgatctgtat  10062500           <------ZmHOX2a(2)          <---------ARR14(2)          --------->ARR14(2)         <------NtERF2        <---------DEAR3(2)        <---------MYB46(3)                                                            --------->YAB1      <---------LBD16                                                                 --------->TOE1(3)    <---------DEAR3(1)                                                                --------->TOE2(3)    ------>ZmHOX2a(2)                                                 <---------AHL20(2)  <---------ARR14(2)                                                 <---------AHL20(1)  --------->ARR14(2)                                                 --------->AHL20(2) -------LBD16                                                   <---------AHL20(2) <---------CCA1(2) ------ANAC46                                                   --------->AHL20(2)<---------MYB52(1) ------LBD16------>ZmHOX2a(2)   <-----------GT1            --------->AHL20(2)<-----------GT1 ----ARR14(2)     <---------MYB46(3)                 <-----------GT1 --------->AHL20(1) --->ARR14(2)     ----------->GT1         ------->TEIL<-------TEIL   <---------AHL20(2)   cggggatcggcggatcggagttgttaaaaactttttacaaaatgaatcgttcaatatacattttaaaaaaataaaattgttacccttatcttaaatctac  10062600                                                                                            <--------                                                                                      <-----------GT1                                                                                 --------->ATHB12                                                                                 <--------ATHB1                                                                            --------->MYB46(3)                                                                        --------->MYB46(3)  ------->TEIL                   --------->AHL20(2)                          <-------TEIL------>MYB46(1) <---------CCA1(2)                   <---------AHL20(2)                       --------->At4g35610 <---------ATHB12  ---                  --------->AHL20(2)         ---------->DOF2--------->GLK1(1)   --------->ICU4    ---         --------->YAB1---------->DOF2 ----------->GT1    <------ZmHOX2a(1)------>MYB83 --------->ZAT6   aaaaaaaaaaaacataactattaaaaaaagagacactaatatggtgcaaaagatgacataggagatgcacagaaaccatccaatgatttaactgtatctt  10062700                    <---------ANAC46                    <---------ANAC58                    <---------ANAC58                 --------->ALFIN1                <-------PIF5                ------->MYC2                ------->PIF5                <-------MYC3                <-------MYC2                ------->MYC4                <-------MYC4                ------->MYC3               --------->bZIP60(2)               <---------PIF3(3)               --------->O2               <<<<<<<<<<HY5               >>>>>>>>>>HY5               <---------O2               --------->PIF3(3)           ----------------->PIF3(1)          --------->ANAC58        ---------->DOF2        =================bZIP_DOF                                     <---------LBD16     --------->TOE1(3)                                               --------->MYB52(1)     --------->TOE2(3)   <-----------GT1                         --------->At4g35610    --------->ZAT6 <------NtERF2                                 <---------At4g35610   -------->P  --------->TGA1a                             <----------DOF2   ======================MYC_MYB                          <---------ICU4--------->LBD16 -ARR11(3)--------->ANAC58 <---------YAB1     --------->LBD16 --------->RAP2.6(3) ------>ANAC58 <---------bZIP60(2)   ------>ZmHOX2a(1)  --------->GLK1(2)         *TSS         <----- ------>ANAC58 <---------TGA1a    ------>ZmHOX2a(1) --------->YAB1 ----------->HVH21    ---------->DOF2   acgctaaccctaaagccacgtggcgaattaccattcctcctcatttgccccgaatgataatcttttcggctcaccggagagagacacacagaaagactat  10062800                                                                                                   --                                                                                                   --                                                                                                  ---                                                                                           --------->ANAC58                                                                                      <------MYB46(1)                         ---------->DOF2                                              <------MYB83<--               ---------->DOF2                           ----------->GT1            <--------P  -----            ------------------------>ANAC81            ---------->DOF2            <---------MYB46(3)< ---------->DOF2   ---------->DOF2           --------->YAB1            <------ZmHOX2a(2)   --------->ANAC58 ----ZAT14 ---------->DOF2                  <---------YAB1----------->GT1         --------->ATHB12---   agagaaagagagagaaagaaagaaagaaaaagagtgagagtgtttgatgataagagagaaagataaaaaatggatcaagatgactggttgggaacgctaa  10062900               <---------TOE1(2)               <---------TOE2(2)         --------->DAG2        ---------->DOF2        --------->SPL7                                                                          -----       <--------P                                           <------ZmHOX2a(2)                 <------      <---------MYB52(1)        <---------DOF5.7(2)     --------->SPL7                        <------     <---------DEAR3(2)        ----------->HVH21      <---------SPL7                          <------   <---------LBD16             --------->WRKY38(1)    <-----------HVH21                       ------- --------->ANAC58              --------->WRKY12      <---------ANAC58                         <------ --------->ANAC58             <---------MYB52(1)     <---------ANAC58                         <------ --------->ANAC46             --------->DOF5.7(2)   --------->DEAR3(2)      ------>NtERF2     <------ ------->CCA1(2)             <-------GAMYB         --------->SPL7         <------NtERF2    --------->ALFIN1 ------->ARR14(1)            <---------At4g35610  <---------ARR14(2)     <---------ATERF1(1)<-------- ------>ARR11(1)     --------->DAG2               --------->ARR14(2)     ------>NtERF2    <-------MYC3 -------ARR14(2)    ---------->DOF2              <---------MYB52(1)     --------->DEAR3(1)------->MYC3 ------>ARR10 <------NtERF2 <---------ANAC46     <---------SPL7        --------->DEAR3(2)<---------O2 -------TEIL  <-----------RAV1(2)               --------->LBD16    ---------->DOF2       --------->O2 ------>ARR14(2) <------ZmHOX2a(1)            <---------LBD16------>ZmHOX2a(2)   <-----------HVH21   gatacgccggtaaggcgcaggataaagtttccgttgacgctctcatgctccggtaccgtccgatcgctccaaagccgacgactggtcagccatgtggtgt  10063000                                                                                      --------->REM1(2)                                                                                     --------->ALFIN1                                                                                    <-------MYC4                                                                                    <-------PIF5                                                                                    ------->MYC2                                                                                    <-------MYC2                                                                                    ------->PIF5                                                                                    ------->MYC4                                                                                    <-------MYC3                                                                                    ------->MYC3                                                                                    ------->PIF4                                                                                   <---------O2                                                                                   <---------ANAC55(2)                                                                                   --------->ANAC55(2)                                                =============================================bZIP_DOF --------->At4g35610                            ---------->DOF2                    --------->O2 <---------At4g35610                          --------->ANAC58                     --------->TGA1a ---->ALFIN1                                  --------->ANAC58                     <---------TGA1a ---REM1(1)                                 ------>MYB83                          <-------TEIL ---ANAC58                                  --------->MYB52(1)                    ------------>OsbHLH66 ---ANAC58                                  ------>MYB46(1)                      <------------OsbHLH66 -->ALFIN1                               --------->MYB46(3)              --------->YAB1 <---------ANAC46 ---bZIP60(2)                      --------->MYB52(1)      <---------TOE1(3)---------->DOF2 -----RAV1(1)           --------->ANAC46------->TEIL       <---------TOE2(3)=================bZIP_DOF ---ANAC46             --------->SPL7<---------MYB52(2) <---------MYB52(1)  <---------ICU4 -ANAC46  ----------->RAV1(1)   --------->At4g35610  <-------TEIL     --------->YAB1<-------PIF4    -   ggcagataacaacaacaatagctcatacggtatgagcaaacgaaccaaacgaaagtacgttagggtttcgaagaataataaaggcacgtgtcgaggtaag  10063100                                           <---------O2                                           --------->bZIP60(1)                                           <---------TGA1a                                           <---------ANAC58                                           --------->O2               <---------At4g35610         <---------bZIP60(1)        <---------ANAC58                   <---------ANAC46        <---------ANAC58                ----------->TGA1     ----------->HVH21                  ----------->HVH21    ------>ZmHOX2a(2)                 --------->bZIP60(1)   --------->CCA1(2)                  <---------bZIP60(1)   <------ZmHOX2a(2)                  <---------ANAC58  <---------ARR11(3)                  <---------bZIP60(2)              <---------RVE1(1)  <---------AGP1             --------->MYB52(1)                        <---------CCA1(1)  <---------ARR14(2)       --------->MYB46(3)                         <---------ARR11(3)  --------->AGP1      <---------HSFB2a(2)  <---------bZIP60(2)        --------->ARR11(3)  --------->ARR14(2)  --------->HSFB2a(2)  <---------ANAC58 <------NtERF2                      <-----  <-----------ARR10  ------>ZmHOX2a(2)<---------ANAC46     --------->LBD16              --------->ANAC46  --------->ARR11(3) <---------LBD16  <---------ANAC58    --------->ETT(1)     <---------MYB52(1) <-- <---------CCA1(2)--------->ATHB12 --------->bZIP60(1)    --------->LBD16     --------->LBD16<------- ---------->ARR10<---------YAB1    <---------bZIP60(1)   <---------LBD16    <---------LBD16 <-------GAMYB   agcagatctgacttgtctgatgatcgggaacaaactgatgtcgtgacgttgcaactcttgccggaaaaatcagatatttccggtgagtactcgccgttgg  10063200                                                              --------->ALFIN1                                                             <-------MYC2                                                             <-------PIF5                                                             ------->MYC2                  --------->LBD16                                                             ------->MYC4                 <---------ANAC46                                                             <-------MYC4              --------->O2                                                             ------->PIF5              --------->TGA1a                                                             ------->MYC3              <---------O2                                                             <-------MYC3              <---------TGA1a                                                            --------->O2               ==============                                                            =========================MYC_MYB                                                            <---------TGA1a          --------->MYB52(1)                                                         ========================================MYC_MYB                                                         -------->P                 ----------->HVH21                   ----------->GT1                       =============MYC_MYB      <-----------HVH21                   <---------DEAR3(2)                    ------>MYB83              <-----------TGA1                  <---------DEAR3(1)                     ------>MYB46(1)     ------->GAMYB<---------DEAR3(1)                  <---------At1g77200                 --------->MYB46(3)     ====================MYC_MYB              ------>ZmHOX2a(2)                  --------->ANAC58<---------ANAC58 --------->bZIP60(2)              ==================================HOX2a_HOX2a <---------O2     ========================             <------ZmHOX2a(2)                   --------->ANAC46<---------ANAC58<------NtERF2            --------->ARR14(2)            <---------ARR14(2)<---------ANAC55(2)  --------->At4g35610   <---------ARR11(3)                     --------->ARR14(2)--------->TGA1a --------->ANAC46 <-------   --------->ARR11(3)                    <------ZmHOX2a(1)<---------ALFIN1 --------->RAP2.6(3) <---------YAB1  <---------MYB52(1)     ----------->GT1--------->AtMYB61  <-----------GT1<---------LBD16 ----MYB46(3)===================================HOX2a_HOX2a------------>OsbHLH66<---------ATERF1(1) ----ZmHOX2a(2) <-----------HVH21    XXXXXXXXXXXXXXXXXXXX>MIR835-3P       --------->MYB52(1)<------NtERF2 --MYB52(1) <---------ARR14(2)  --------->GLK1(2)--------->ANAC58<---------ANAC46<---------At4g35610   atcaagatagtctcgatccgtcggtgaaatcgataatcggagaggaaacacaagaaaccaacacgtggggtatgtttaacggcagcgtcacggcggagat  10063300  Previous    Next  AGI:  At3g27250.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G40800.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14607.1) Range:  from: 10062782    to: 10063968    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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