Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                                                                           --------->WOX13(1)      --                         --------->TOE1(2)                             --------->YAB1            ----                        --------->ZAT2                               --------->ANAC58           <----                        --------->At4g35610                          --------->ANAC58           -----                      --------->DAG2                     <---------------AtSPL8            <------MYB46(1)                     ---------->DOF2                     --------------->AtSPL3            <------MYB83                ---------->DOF2                 --------->ZAT14      --------->ANAC46  --------->ATHB12            <----------ID1        ------->TEIL  <---------ZAT14----------->RAV1(1)    <---------YAB1-   ggaattgaagaagagagacaaagaaaagctgcgatgaatccaatcccaagaacactggtgaagtacaacacaagcatcaatctccttgaagattggtgat  10054800        --------->ICU4        <---------YAB1      --------->YAB1     --------->ICU4     <---------YAB1   --------->YAB1  <---------YAB1  --------->ICU4 --------YAB1                                                              --------->ANAC58 ------->ICU4                                                              --------->ANAC58 ----->YAB1                                                                --------->RAP2.6(2)------- -----YAB1            --------->ANAC46                                     --------->ANAC46  -------- ---->ICU4         --------->KAN4(2)                       <---------At4g35610               <------- -------->YAB1----------->GT1                     ---------->DOF2 --------->YAB1           --------->YAB1   gatgatgatgatgatcaggtttattcgccatttgtgtttatgcagagctattgaaagagacatctcattcatatagaccgcaacgagaaacagtgatgat  10054900                                                               ------>MYB83                                                   <---------MYB46(3)                                                  <---------AtMYB61                 <---------GLK1(2)               <---------MYB52(1)              <---------MYB46(3)               *TSS                            --------->DEAR3(1)                --------->ABI4(2)          <---------At4g35610                  <---------DEAR3(1)                --------->MYB55(2)      --------->ANAC46                         <---------ATERF1(2)           <---------DREB2C(2)      <---------TGA1a                          --------->ATERF1(2)        --------->ANAC58      --------->O2                            <------NtERF2--------->ANAC46  <---------DEAR3(1)      --------->TGA1a                         <---------LBD16  ------>MYB46(1) <---------MYB52(1)      <---------O2--------->GLK1(2)           --------->ATERF1(1)    <---------GLK1(1)              <    <-----------GT1                          <---------RAP2.3(1)     --------->GLK1(1)------------>CBF -->ATHB12--------->At4g35610               <---------DEAR3(1) -------->P --------->ANAC46        --- ->ICU4  <---------DEAR3(1)                --------->ZAT18----------------->AGL2<---------AtMYB61 <-- --YAB1<-----------HVH21          --------->AHL20(2)     <-----------GT1  --------->ANAC58       <---   ttgatttcacgtcgctgaagaatctctcattaccgaaaaaatatgtgcgccggtggtttttccccaaccagaaatcacgccggtggtttccaattttgta  10055000       <---------------AGL15       --------------->AGL15       =================================MADS_MADS     <---------AHL20(2)                                                        --------->ATHB12   <---------YAB1                  --------->HSFB2a(1)                      <---------ANAC58  <---------AHL20(1)               --------->HSFC1(2)                <---------AHL20(2)  <---------AHL20(2)               <---------HSFC1(2)               <---------AHL20(2)             -- ---------YAB1                    ------->TEIL                      --------->YAB1                 -- ------>YAB1                     <-----------GT1          --------->MYB52(2)<---------ANAC58      <-- ------HAHB4            <---------------AGL15 <----------ID1        --------->AHL20(2)        ------- ------YAB1   ----------->GT1 --------------->AtSPL8 --------->DAG2--------->ICU4 --------->AHL20(2)   ttattatttttttttttggtaatttcccctaatttgaaccttcttaacgagacaaaaggtttgtttgtaattatatgggcttgattaaaaactaagccca  10055100                                                 --------->WRKY38(1)<------NtERF2                                               --------->REM1(2)   <---------RAP2.3(1)                                              --------->ALFIN1    <---------DREB2C(2)                                             ------->MYC3         <---------DEAR4(1)                                             <-------MYC3         <---------At1g77200                                             ------->MYC2         --------->ETT(1)                                             <-------MYC2         *TSS         ---------->DOF2                    ===========================================bZIP_DOF         =============================================bZIP_DOF    <---------RAP2.3(3)      --------->AHL20(2)                    <---------ANAC55(2)   <---------DEAR3(1)     --------->AHL20(2)                     <---------O2         --------->DDF1   --------->YAB1                           --------->TGA1a      --------->RAP2.6(3) ------->YAB1                               <---------ANAC46    <-----------HVH21 ------->AHL20(2)                           --------->ANAC55(2)<-----------RAV1(1)        --------->ZAT14 -------ATHB12                              --------->O2       --------->O2               <---------ZAT14 ----->CBF                    --------->YAB1<---------TGA1a    <---------O2 <----------DOF2   attaaaaataaaaaagcccatgaaaaatagaatcatatagtcactcacgtgttgactctcgagtcatgtcggcgatttctttcactctccagtaaacttc  10055200                                                                                                 ----                                                                                                <----                         ---------->DOF2                                                        -----                       --------->At5g28300                                                     ------                    <---------LBD16                                                            ------                   --------->MYB52(1)                                                          <-----           <---------At4g35610                      <------------------------ANAC81            <-----           --------->At4g35610             --------->TOE2(3)    --------->ANAC46  ------->TEIL <-----        <---------At4g35610              ------->TEIL <-----------GT1   <---------YAB1         ------   accaagtctcttctgctgaaatcacggtaatgcaattctcatgaaccttgattttgtttctgttcttcgcaatttctattgttgaatctttctgctagat  10055300                                                                                       --------->CCA1(2)                                                                                       <------ZmHOX2a(2)    <---------GLK1(2)                                                    <------ZmHOX2a(2) <---------WOX13(1)                                                     <---------ARR14(2) -->ZmHOX2a(2)                                                          --------->ARR14(2) --ZmHOX2a(2)                                                           <---------ARR11(3) ---->CCA1(2)                                                           --------->AGP1<---------ARR14(2) --->ARR11(3)                                          --------->At4g35610    <---------ATHB12 --->AGP1                                             --------->GLK1(2)<---------At4g35610 ----ARR14(2)                                        <---------GLK1(2) --------->At4g35610 ----ARR11(3)                                   <---------ZAT2   <---------ANAC58     --------->ARR14(2) ----AGP1                                       --------->ZAT2   <---------ANAC58     <---------ARR11(3) --->ARR14(2)          <---------ZAT6       <---------ATHB12   --------->ARR11(3)     --------->ARR11(3)   ctgaatgattcttcaaatcgaagtactcttagtttttttttgttaaatcaagctggaatctgaaatttcttgcagatccaatgaagaagatccaagttat  10055400                                                                               <------ZmHOX2a(2)                                                                              --------->ARR14(2)                                                                              --------->ARR11(3)                                                                              <---------ARR11(3)                                                                              <---------ARR14(2)                                                                          ---------->DOF2                                                                       --------->TOE2(3)                                                                       <----------DOF2                                                                    ------->TEIL                                                                    <---------ARR11(3)                                                                    <---------ARR11(1)                                                                   <---------CCA1(2)                             <---------At4g35610                ------>ZmHOX2a(2)                        <---------At4g35610                   --------->ARR11(3)                   --                        --------->At4g35610     --------->ZAT14<------ZmHOX2a(2)                  <--                   <---------ANAC58             <---------ZAT14--------->At4g35610         --------->MYB46(3)                   <---------ANAC58           --------->ANAC46<---------ARR14(2)   <---------DEAR3(1)              --------->TOE2(3)           <-----------HVH21   --------->ARR14(2)------>ZmHOX2a(2) <--              --------->TOE1(3)          <----------DOF2      <---------ARR11(3)<---------DEAR3(1)---   atagtgagacctcaaaccttagcttgagctctgcttcttctctctttcactgcattgaagatgggatctgtatctttaaagatcggcgatggaacagcca  10055500                                 ------->TEIL                             --------->At5g28300                             --------->LBD16                          --------->LBD16          --------->TOE2(3) <---------ANAC46        ------->TEIL      ------>NtERF2                 <-----------TGA1 ------->GLK1(2)         ------->GAMYB ------>ZmHOX2a(1)<-----------HVH21 -------ARR14(2)         --------->ANAC46              --------->bZIP60(1) -------GLK1(2)         --------->MYB46(3)             --------->O2               --------->ANAC46 ------>ARR14(2)       <---------At4g35610             <---------bZIP60(1)  <---------DAG2  ------>ZmHOX2a(1)   gattccgacgaacatcaatttgttcatccgccgtgaacctcctcatgctcttctccgtcgtcaccacaaatctcttcgccttatacgcgttctcctctca  10055600                          <---------ZAT2                          <---------At4g35610                                                       <                          --------->At4g35610                                                       <                --------->O2                                                                       <-              <---------ALFIN1       <-----------ARR10                                             --           --------->ANAC46          <---------ARR11(3)                                           ---           --------->ANAC58          --------->ARR11(3)                   --------->LBD16     -------           --------->ANAC58    ----------->RAV1(1)                        --------->HSFB2a(2) -------   --------->ANAC46       --------->ZAT2                       <----------DOF2--------->GLK1(1)------   --------->ANAC58     --------->ANAC46                <---------ARR11(3)<---------HSFB2a(2) -------   --------->ANAC58   <---------ALFIN1         <---------CCA1(2)   <---------GLK1(2) <-------TEIL ---   ttcccaagcaaactcgccacttctccacagctccaacaatatctcactcgtttctcaacatctctctttgattctccgagaaatcgattcgtctcaacgc  10055700  Previous    Next  AGI:  At3g27220.1    Description:  kelch repeat-containing protein. Identical to Kelch repeat-containing protein At3g27220 [Arabidopsis Thaliana] (GB:Q9LK31;GB:Q93ZP9); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G51540.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14604.1); contains InterPro domain Kelch repeat type 1 (InterPro:IPR006652); contains InterPro domain Kelch-type beta propeller (InterPro:IPR015915); contains InterPro domain Kelch repeat type 2 (InterPro:IPR011498); contains InterPro domain Kelch related (InterPro:IPR013089); contains InterPro domain Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043) Range:  from: 10052849    to: 10054915    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g27230.1    Description:  similar to (ARABIDOPSIS THALIANA RAS ASSOCIATED WITH DIABETES PROTEIN 3), methyltransferase [Arabidopsis thaliana] (TAIR:AT5G40830.1); similar to (ARABIDOPSIS THALIANA RAS ASSOCIATED WITH DIABETES PROTEIN 3), methyltransferase [Arabidopsis thaliana] (TAIR:AT5G40830.2); similar to hypothetical protein [Prunus persica] (GB:AAO14627.1); contains domain SSF53335 (SSF53335) Range:  from: 10055166    to: 10056932    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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