Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           <---------YAB1                                                          --------->AHL20(2)         --------->ICU4--------->ARR14(2)                                        --------->YAB1 -------LBD16          <---------ARR14(2)      <---------ARR14(2)               <---------ATHB51 -----WRKY18(1)       <------NtERF2            --------->ARR14(2)             --------->WOX13(1) --->WRKY38(1)       --------->LBD16           --------->GLK1(2)       --------->ANAC55(2) --->WRKY12         --------->LBD16    <---------ANAC58                --------->YAB1      ---------- ----->HVH21       <---------LBD16     <---------ANAC58               <-------TEIL <---------YAB1   - ->CCA1(2)  <---------YAB1  --------------->AtSPL8        --------->ATHB12   --------->AHL20(2)------   accggagtgagattattattcgccggaatcgaagtactcttccttggcgattctgagaattcattgagaacatacataatcaattataaaacaaaaagag  10048200                 <---------AHL20(2)              <---------AHL20(1)              --------->AHL20(1)              <---------ARR11(3)        --------->YAB1    <---------AHL20(2) --------->AHL20(2)                                 --------->YAB1 <---------AHL20(2)                              --------->WOX13(1)         ------>ZmHOX2a(2) --------->AHL20(1)                            <---------YAB1             --------->ARR11(3) <---------AHL20(1)                            <------ZmHOX2a(2)          <---------ARR11(3) >DOF2 <---------YAB1      --------->GLK1(2)  <---------ARR11(3)    <---------YAB1       --------->YAB1 -------->ICU4--------->ARR11(3)              --------->ARR11(3) --------->ICU4         <---------YAB1 ----->GT1  --------->GLK1(2)             ---------->DOF2        --------->GLK1(2)    --------->YAB1-   taatattttatgagaatattttatagactaatctgagaaatattgaaagatcattcaaaacacagagattatgaatgatctctctcgattataagaagaa  10048300                    <----------DOF2                                                      <---------LBD16           <-----------GT1                                                             <---------ARR14(2)        <---------ICU4  <---------ANAC58                                               --------->GLK1(2)       --------->AHL20(2)                   <------ZmHOX2a(2)                         <---------GLK1(2)       --------->AHL20(1)           <----------ID1                              --------->At4g35610       <---------AHL20(2)          <------ZmHOX2a(1)   ---------->ID1           <---------At4g35610      --------->AHL20(2)<---------ANAC58   <---------ARR11(3)                   ----------->RAV1(2) ---------->GT1---------->DOF2     ================HOX2a_HOX2a              <-----------HVH21   <----   gttggaaaaaaaattaccaaagcttttcttgacagaaggagacaagatcgaaacgttgtcgtttttgttatcgttcacagtcatctgagattctggagtt  10048400                                                                                       <---------AHL20(2)                                                                                      --------->AHL20(2)                                                                                   <---------AHL20(1)                                                                                   --------->AHL20(1)                                                                                   --------->AHL20(2)                                                                                  --------->AHL20(2)                                                                             --------->YAB1                      <---------ZAT6   ------>NtERF2                   --------->ANAC46--------->AHL20(2)         <---------At4g35610        ------>NtERF2 ------->TEIL    <---------YAB1  <---------AHL20(2)         --------->At4g35610       --------->DEAR3(1)            --------->AHL20(2)<---------AHL20(2) -------GT1           ----------->GT1 --------->DEAR3(1) --------->YAB1--------->ANAC55(2) ----------   accatactatcagctctaatcggagagttattaagcgacgacgacgaagacgaacccattcatagattaatataagtaatcaaaataaatttataaagag  10048500                                     --------->YAB1                                  <---------ICU4                                  --------->YAB1                       --------->ATHB12                                         *TSS <----------DOF2    <---------------AGL15        <---------ATHB51                              <---------ANAC58    <----------DOF2   <---------AHL20(2)                                 <---------YAB1    --------------->AGL15<---------WOX13(1)                 ---------->DOF2    <---------ANAC58   --------->TOE2(3)  <---------YAB1<---------YAB1      <----------ID1  --------->TOE2(3) >DOF2       ---------->DOF2     --------->ICU4  <------ZmHOX2a(2)      --------->YAB1           ----   caaaacctttttagagaaagaaatttgattgagaaattatgatcaaacgagatcgatagcgagaaagagactaatcttattgcttctcttttgttttttg  10048600                                                 <---------ALFIN1                                              --------->ABI4(2)                                       <---------REM1(2)                                    --------->ANAC58                                    --------->ANAC58                                  <---------ALFIN1                ---------->DOF2 <---------ALFIN1--------->ZAT18             <------NtERF2   <---------TCP15(1) <---------ZAT18                     <---------ANAC58           <---------DEAR3(1)--------->PCF2   --------->PCF2                        <---------ANAC46        <---------ANAC46    <---------PCF2    <---------ZAT18 <-----------RAV1(1)   <---------ANAC58        <---------ANAC58   <------MYB46(1)    ------>NtERF2 <---------ANAC58       <------NtERF2        <---------ANAC58   <------MYB83<-------TEIL         <---------ANAC58     --------->ALFIN1   <---------YAB1         --------->MYB59 --------->ANAC46  <---------ANAC46  <---------DEAR3(1) ----------------->WRI1   --------->MYB111(1) <---------ATERF1(1)     <------ZmHOX2a(1)   tttttatgtttcgtcggagaaagagaagtaggtcccacacgtacacggtgcccactcagttttcgtgttggaggagtgagacggtgtcgtattggggctc  10048700                                                                           --------->ICU4                                                                         <---------ICU4                                                                         --------->YAB1                                                                        --------->ICU4                                                                 <-------MYC3                                                                 ------->MYC2                                                                 <-------MYC2                                                                 <-------PIF5                                                                 ------->PIF5                                                                --------->ANAC55(2)                                             <---------ANAC58   <---------ANAC55(2)                                             <---------ANAC58   <---------ANAC58                                             <---------ANAC55(2)<---------ANAC46                                             --------->ANAC55(2)--------->O2                                           --------->ALFIN1     ====================================bZIP_DOF                                          ------->PIF5          <---------TGA1a                               --------->ATHB12----------->HVH21<---------ANAC58                              <---------YAB1 <---------ANAC46   <---------bZIP60(2)       <---------MYB52(1)                              --------->ICU4<-------TEIL        ====================================bZIP_DOF                     ==============================RAV          <---------O2             ------>ZmHOX2a(1)                     ----------->RAV1(1) <---------ZAT2         --------->TGA1a          <----------DOF2                    ----------->HVH21    --------->ZAT2      ----------->HVH21       --------->ARR11(3)                   --------->SPL7      <-----------RAV1(2)  <-----------HVH21   --------->AHL20(2)                 --------->TOE2(2)  --------->TCP20<----------DOF2--------->ALFIN1  --------->CCA1(1)                 --------->TOE1(2)  <---------PCF5 <---------DAG2------->MYC3 ----------->GT1  ------                <---------ANAC58    <---------PCF2 =======================bZIP_DOF  --------->RVE1(1)                <---------ANAC58   ----------->HVH21        <-----------------PIF3(1)<---------ARR11(3)       --------->ANAC46     --------->YAB1<-------PIF5     --------->bZIP60(1)<---------ANAC55(2)   tctctatccacgtagttatcgtgcgacatatcatgatgggaccaggtgcgtgacttttttggtgtcacgtggcactaattatgtaaatatcctttagttt  10048800                                                                              <---------LBD16                                                                            <---------ARR14(2)                                                                            --------->ARR14(2)                                                                            --------->ARR11(3)                                                                     ------>MYB83                                                                     ------>MYB46(1)                                                                     -------->P                                                                   <---------MYB111(1)                                                                   ------->GAMYB--------->LBD16                                                                   --------->AtMYB61                                                                   --------->MYB46(3)                                                                  <---------MYB52(2)                   ---------->DOF2                                <---------MYB55(2)            <---------ANAC46                                      --------->MYB46(3)            <---------ANAC55(2)                            --------->LBD16 --------->GLK1(1)            --------->ANAC55(2)                        --------->ARR14(2)  <---------GLK1(1)            <---------ANAC58                           --------->ARR11(3)  --------->RVE1(1)            <---------ANAC55(1)                      ---------->TaMYB80------->GAMYB  --------->ATHB12       <---------ICU4    --------->MYB52(1)          ----------->ARR10--------->MYB46(3)            -       --------->ATHB12--------->ARR11(3)        ----------->GT1 --------->ANAC46    <---------YAB1-- <----------DOF2  <---------AHL20(2)    <---------ATHB12 <---------LBD16 ------>MYB83<---------AHL20(2) --->ZAT14  <---------ANAC58------->GAMYB--------->YAB1<---------ARR14(2)------>MYB46(1)           <-   agtctttagtgattacgtattaaaagataaccgaaaattcaaatcaaaacttggtaatatccggttcaaccaaccaaatatccggttttaattggatttt  10048900                                                                  <---------YAB1                                                      <---------ICU4                          <------                                                      --------->ATHB12                        <------                --------->LBD16                       <--------ATHB1                        ---------               <---------LBD16                        --------->ATHB51                     <---------ANAC55(2)               <---------ANAC46                       -------->HAHB4                       --------->ANAC55(2)              <---------LBD16                        --------->ICU4                       <---------LBD16       ----------->GT1              <----------DOF2  <---------ATHB12                 <---------GLK1(1) ----->ZmHOX2a(2)        --------->ARR11(3)          <---------AHL20(2)               --------->GLK1(1) ------->At4g35610   <---------DOF5.7(2)             --------->AHL20(2)        --------->YAB1<------- --------At4g35610  <---------WRKY12<---------DAG2   <---------ATHB51          ---------->DOF2-------   gatctgaacaagttataccgggtaaacgatattggaaactttttttttggtccaaataattggaaactattattcaaactataatgcgaaatcccgtatc  10049000                                                                           ---------->DOF2                                                                        --------->YAB1                                                                        --------->AHL20(2)                                                                       <---------YAB1                                                                       --------->ICU4                                                                     <---------ICU4                                                                     <--------HAHB4     --------->CCA1(2) ---ARR14(2)                      ----------->GT1                    --------->YAB1     <---------GLK1(1) ---ARR11(1)              --------->LBD16                           --------->ICU4     --------->ARR14(2) >LBD16                  <---------HSFB2a(2)                 <-----------GT1     <---------YAB1 --CCA1(2)<-----------GT1--------->HSFB2a(2)              <---------MYB46(3) ----------->GT1   ------ -->ARR14(2)     <---------AHL20(2)                 <---------LBD16 --------->AHL20(2) <---------ARR14(2)   caaatagttgtattactatataaacttccacaaatttagaaaaatatcaaatatttcggattgttacagaataattataaagtataatggatatgagaat  10049100  Previous    Next  AGI:  At3g27210.1    Description:  Identical to Uncharacterized protein At3g27210 (Y-2) [Arabidopsis Thaliana] (GB:Q9LK32); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G40860.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14583.1) Range:  from: 10046423    to: 10048580    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version