Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   <----------DOF2     --------->ZAT14                     <---------YAB1                  <---------ZAT18                    --------->ZAT14                    <---------AHL20(2)          <---------MYB52(1)                      <---------ZAT14                    --------->AHL20(2)     --------->ARR14(2)                     ------->TEIL -------->ANAC46 <---------GLK1(2)         <---------ARR14(2)     ------>ZmHOX2a(1) <-----------GT1 ------DOF2      <---------ARR11(3)       <---------GLK1(1) ------>NtERF2      <---------ATHB12  ----   ataagacattttaaacctagattttaatagttctactttcaaacaaatccgatagtttactcggcctcctatatcaaacaaatgaatcactatacaaggc  10024900                                                                                                   <-                                                                                                   --                                                                                                 <---                                                                                                <----                                                             <---------AHL20(2)            <-------GAMYB                                                          --------->AHL20(2)            <---------ANAC58        <-----------ARR10                                 --------->YAB1                <-------GAMYB        --------->ARR11(3)                             --------->YAB1     --------->ATHB12<---------MYB46(3)        --------->GLK1(2)                           --------->YAB1--------->ANAC58      <---------ANAC58        <---------ARR11(3)                      <---------AHL20(2)--------->ANAC58    <---------AtMYB61  ----------->GT1                              <---------YAB1--------->AHL20(2)   <---------HSFB2a(1) ------->RAV1(1)     --------->TOE2(3) <-----------GT1<---------YAB1     <---------YAB1<---------MYB46(3)   cacatagaaaaatcttatccctacgttatacaaatacaaattcacaatttttatttataataaaaaattcgcaatttgattagaacctttggttgttatt  10025000                           -------->ATHB1                           <------------ATHB5                           --------->ATHB12                           <---------ICU4                           <--------ATHB1                           --------->YAB1                          <---------ATHB12                          --------->ICU4      --------->ANAC46  --------->WOX13(1)                                                      -----   <---------ZAT18  ----------->GT1                                                           ------- --------------AtSPL8  ------------>ATHB5                                         <-----------GT1 ------------->AtSPL8 --------->WRKY18(1)                                        <---------MYB52(1) ------AHL20(2)<---------AHL20(2)                                               <-------GAMYB ------- -----AHL20(2) --------->AHL20(2)                                              <---------MYB46(3)   tattgtacacataatattaaaatggtcaatcattgtctcgtcttgtagtttagcatatgtatggattacatagttttctgtctgttaccctctcacaagc  10025100                                                        <---------AHL20(2)                                                        ----------->TBP                                                        --------->AHL20(2)                                                  <---------ANAC46                                                  --------->ANAC55(2)                                                  <---------ANAC55(2)                                                  <---------ANAC55(1)                            ----               --------->ICU4                    <-------TEIL                                <-------             --------------->AGL15              --------->CCA1(2)                           ---------            ----------------->AGL3             --------->ARR14(2)             <---------------AGL15            ==================================================================================MADS_MADS   <-----------HVH21                           --------->ARR11(1)             --------------->AGL15 ---->YAB1  ----------------->AGL2             <---------ARR14(2)<---------ETT(2)  ---------->DOF2 -->ANAC58--------->ANAC58          --------->ANAC46  ----------->TBP   <-----------GT1     <-------- -->ANAC58--------->ANAC58       --------->ARR14(2)  ------->TEIL--------->ETT(2)<---------YAB1 -----   ataagcgtcgtctcgccaaaattagacactattcatatacacaaatatagatacgtatataaatatgtagacatttacaacttataaaagaaaattaaat  10025200                                             <---------AHL20(2)                                             --------->AHL20(2)                                          <---------ICU4                                          <--------ATHB1                                          <---------AHL20(2)                                          --------->YAB1                                          <---------AHL20(1)                                          --------->AHL20(2)                                         --------->ICU4                                       --------->YAB1                                      <---------YAB1                                     <---------AHL20(2)                                     --------->AHL20(2)                                     --------->AHL20(1)          ------->GAMYB                                    <---------ICU4              --------->MYB46(3)                                    --------->YAB1              <---------MYB55(2)                                   <---------YAB1               <---------MYB111(2)                                   --------->ICU4              ------>MYB46(1)         --------->RAP2.6(3)     <---------ICU4                -------->P     ---------->DOF2            --------->AHL20(2)             ------>MYB83 ----->AHL20(2)                 --------->ICU4               ------->GAMYB --AHL20(2)                     <---------AHL20(2)          <---------MYB52(2) >AHL20(2)                      <---------ATHB51      *TSS  --------->MYB46(3) -AHL20(2)  <------NtERF2<---------AtLEC2<---------YAB1   <-----------GT1     <----------DOF2 ---->AHL20(2)   ------------>CBF--------->YAB1   ---------->DOF2--------->AtMYB61         ----------   aaaaaacaaaagtcggcaaaccaatttgcatgaaataattataataattttttaaagaaataaccaaccaccaagaagtgctttgttaacagagaaagct  10025300                                          --------->ANAC58                                          --------->ANAC58                     <-------GAMYB    --------->AtMYB61                                         <----                    <-----------RAV1(1) ---------->DOF2                                       -------              --------->DAG2     --------->DEAR3(2)                                          --------       --------->TOE2(3)       --------->ARR14(2)        <----------DOF2         --------->ALFIN1     ------->TEIL--------->GLK1(2)<---------ETT(1)      <---------ICU4           <---------AtMYB61<-- >DOF2 --------->TOE1(3)       <---------ARR14(2)   <-------TEIL    ---------->DOF2          <-------   ctgtaagaaccttaaaaaggttctgttgcagaggttccgaccaaaagccagagtttcatctttatgtgaacaaagacagagagatggtggaagaagattt  10025400       <------MYB83       <------MYB46(1)                                            -------->P      <---------AtMYB61                                           ------>MYB46(1)     <---------WOX13(1)                 <---------ATERF1(1)       ------>MYB83    <---------GLK1(2)                   ------>NtERF2           ------->GAMYB    --------->ARR14(2)                 ----------->HVH21       --------->MYB46(3)    <---------ARR14(2)                 --------->DEAR3(1)    <-----------GT1 -----AHL20(2)          <---------YAB1--------->ATERF1(1) --------->ANAC46 -->CCA1(2)           --------->YAB1  <------NtERF2    ------->GAMYB ->ARR11(3)        <---------ICU4    <---------ATERF1(1)  --------->ANAC55(1)               <-------- ---------GT1   ----------->GT1     <---------DEAR3(1)<---------ALFIN1       <---------TOE2(3) --ARR11(3)     --------->YAB1     <------ZmHOX2a(1)----------->RAV1(1)      <---------TOE1(3)   aaaccagattggtggtaatagtaattacaatggagaaggaggcgacccagagagcaacacacttaaccaacctctagttaaggctaatcgaacactttct  10025500                      <------NtERF2                  <---------DEAR3(2)                  <------MYB83                  <------MYB46(1)                  <---------MYB46(3)                 <---------AtMYB61                 <---------DEAR3(1)                 --------->MYB111(1)                 <---------MYB46(3)                 --------->MYB46(2)                 --------->MYB111(2)                <---------MYB55(1)                <--------P               <-------GAMYB              --------->MYB55(2)              <---------MYB46(3)             <---------AtMYB61           <----------DOF2                                                <<<<<<<<<TBF1          <---------ANAC58                                             <<<<<<<<<TBF1    <---------ALFIN1 ------>NtERF2      ---------->DOF2          <<<<<<<<<TBF1                   <--- --------->ANAC46--------->MYB55(2)<---------CCA1(2)      <---------KAN4(2)                      <--- --DOF2   <---------ANAC58     ----------------->AGL1<---------YAB1 <<<<<<<<<TBF1       --------->ICU4   tcaactccacttgctttggttggtgccaaagtttcccatatcgaaagcttggactatgagtatgttcttcttcttcttcttctctgcataattttgaatt  10025600                                                                  <---------WOX13(1)                                                               <---------YAB1                                                               --------->ICU4                                                             --------->YAB1                                                    ------>ZmHOX2a(2)                                                   <------ZmHOX2a(2)           <------ZmHOX2a(2)                      --------->TOE2(3)           --------->ARR14(2)          --------->ARR11(3)                <----------DOF2                   --------->ARR11(3)          <---------ARR11(3)        <----------DOF2                           <---------ARR11(3)      ---------->DOF2 --------->ANAC58 --------RAV1(2)--------->TOE2(3)                 <---------ARR14(2)----------->GT1       --------->ANAC58 ------LBD16   <---------ICU4                  <---------KAN4(2)--------->ATHB12 ---------->DOF2   caggggtcttcttttaatctttaatctaaatattgacagaataaacgagaacgatctgtttaagcatgattggagaaaaagatcaaaggcacaagtactt  10025700                                    <------MYB46(1)                                          --------                                    <------MYB83                                             ------>NtERF2                                   <---------AtMYB61                                        <--------                                  <--------P                                                ---------                                <-----------RAV1(1)                                         <--------                              <---------ANAC58                                              ---------  --------->ANAC55(2)    <---------ANAC58                                                  <---------LBD16  <---------ANAC55(2)    <---------ANAC58                                                  --------->ATERF1(1)  <---------ANAC58     --------->MYB52(2)                                                  --------->DEAR4(2)  <---------ANAC55(1)--------->DOF5.7(2)    <-----------GT1                  <---------MYB46(3)  <---------ANAC46   <---------MYB52(1) <----------DOF2                    --------->At4g35610  <---------ANAC58------->TEIL<---------ANAC58  ----------->GT1            <---------At4g35610<------NtERF2   caatacgtgttcttgaaatggacgttagcttgtcttgttggtcttttcactggtttaatcgctactctcatcaacttagctgttgaaaacatcgccggct  10025800  Previous    Next  AGI:  At3g27170.1    Description:  CLC-B (chloride channel protein B); anion channel/ voltage-gated chloride channel. Identical to Chloride channel protein CLC-b (CLC-B) [Arabidopsis Thaliana] (GB:P92942); similar to ATCLC-A (CHLORIDE CHANNEL A), voltage-gated chloride channel [Arabidopsis thaliana] (TAIR:AT5G40890.2); similar to chloride channel-like (CLC) protein, putative [Arabidopsis thaliana] (TAIR:AT5G33280.1); similar to ATCLC-A (CHLORIDE CHANNEL A), anion channel/ voltage-gated chloride channel [Arabidopsis thaliana] (TAIR:AT5G40890.1); similar to chloride channel [Glycine max] (GB:AAY43007.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48998.1); simil Range:  from: 10025254    to: 10028435    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version