Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               <-----------RAV1(1)                                                                             --------->MYB52(2)                                                                             --------->MYB55(2)                                                                           <---------MYB52(1)                                                  --------->YAB1     --------->ARR11(3)          --------->YAB1                         --------------->AGL15   <---------ANAC58         ----------->GT1                         <---------------AGL15   <---------ANAC58     --------->AHL20(1)                         <-----------------AGL1   <---------ANAC46     --------->ARR11(3)                <---------ETT(2)              <---------ARR11(3)     <---------AHL20(1)               <------ZmHOX2a(2)        --------->YAB1<---------MYB46(3)  --------->AHL20(2)                 --------->ARR14(2)        --------->TOE2(3) -------TOE2(3)  <---------AHL20(2)  <---------ARR14(2)       <---------ATHB12<-------GAMYB -------->GT1   --------->AHL20(2)  --------->GLK1(1)<---------ICU4<---------TOE2(3)   aagaaaaaatattgataattttatctaagactcatgggagatcgacaactactcatattggccaatcttaagatttcgtttgttgcatcaaatctatatt  10018300                  <---------CCA1(2)                          ----------->GT1                 <---------AHL20(2)                     <---------AHL20(2)                --------->YAB1                         --------->AHL20(1)               <---------YAB1                          <---------AHL20(2)                 --------->ZAT14            --------->ICU4                             <---------AHL20(1)                 <---------ZAT14          ------->TEIL                 <---------DAG2  --------->AHL20(2)         --------->ATHB12       --------->ANAC58             <-----------GT1    --------->ARR11(3)        <---------YAB1       --------->ANAC58   --------->DAG2          ------>ZmHOX2a(1)              --------->ICU4     --------->YAB1      ---------->DOF2         --------->TOE2(3)               <---------ATHB12 <---------AHL20(2)--------->ARR11(3)  <----------DOF2 <---------ARR11(3)     ------>ZmHOX2a(1) <----   tgtttaatcacgaacttattatatctataaagtagaagtaactttatttctccttaatatattttgaaaaaatgcaattcctaatgatttagtatagagg  10018400                                                         --------->At4g35610                                                         <---------At4g35610                                                --------->YAB1                    <---------AHL20(2)                                           --------->AHL20(2)                 <---------AHL20(2)                    --------->ATHB51       <---------AHL20(2)                 --------->AHL20(2)                   <---------YAB1       --------->AHL20(2)                   <---------AHL20(2)       --------->ETT(2)                 <---------AHL20(1)                <---------AHL20(2)    --------->ANAC46<---------ICU4      --------->AHL20(1)               <---------AHL20(2) --ZmHOX2a(1)   <---------YAB1     <------ZmHOX2a(1)  ---------->DOF2 <---------AHL20(2)   --------->YAB1   aagttcacgtagacagtcaccattatcgcttcccataggaaatattttattcaaaatacagcagacattgatttttttatttatttttttctgtgataac  10018500                                                                                           ------>MYB83                                                                                           ------>MYB46(1)                                                                                           -------->P                                                                                          --------->MYB55(1)                                                                                         --------->AtMYB61                                                                                         <---------MYB59                  <---------YAB1                                                         --------->MYB46(3)               --------->ICU4                                                            <---------MYB111(1)             --------->MYB111(2)                                                <---------CCA1(2) <--             --------->MYB111(1)                                       <---------ATHB12  <---------MYB55(2)             --------->MYB46(2)                                       ------>MYB83 --------->ZAT6----         --------->MYB59----------->GT1           <---------YAB1      ------>MYB46(1)    <---------MYB46(2)         <---------TOE2(3)                      --------->YAB1       --------->WOX13(1)  <---------MYB111(2)   atctcaaattttaggtagttatgaaatagataatattgaagcgttttcatttataatgggccttataaaaccaatctagcccatatcactaccaacccat  10018600                                                                         --------->WRKY12                                                                         ----------->HVH21                   --------->WOX13(1)                           <---------WOX13(1)          ------->TEIL                                         <------------CBF          <-----------ARR10               ----------->GT1   --------->LBD16          <---------ARR14(2)   --------->ARR14(2)          --------->ANAC58          <---------ARR11(1)   <---------ARR14(2)          --------->ANAC55(1)          <---------ANAC46          --------->GLK1(2)   <---------CCA1(2)            --------->ANAC55(2)         <---------ANAC46          --------->ARR14(2) --------->LBD16               <---------ANAC55(2)       --------->ALFIN1         <---------ARR14(1) <---------ANAC55(2)    --------->GLK1(2) ------>ZmHOX2a(2)<---------LBD16 <-----------GT1  --------->AHL20(2)     --------->LBD16   --------->ANAC46        <------------CBF -------ICU4      <---------AHL20(2)   <---------LBD16     --------->ANAC58   <---------HSFB2a(2) --- ----->AHL20(2)  --------->AHL20(2)  <-----------GT1  ----------->HVH21--------->At4g35610   <-------   ttattacatccgaatctaaattaatcaaacccgtatattaaaccgggtttaaaattctgacccgtaattgatccactgacctagaaattggggggaattg  10018700                                                                      <------NtERF2                                                                      --------->ATERF1(1)                                                                     <---------RAP2.3(1)                                                                     <---------ATERF1(1)                                                                     <---------ERF1                                                                     ------>NtERF2                                                                    <---------RAP2.3(2)                                                                    <---------RAP2.3(3)                                                                    <---------DEAR3(1)                                                                   --------->RAP2.6(3)                                                               <---------DOF5.7(2)                                                             --------->DOF5.7(2)                                             <<<<<<<<<TBF1------>NtERF2                                          <<<<<<<<<TBF1  <---------ANAC46                           -      --------->TOE2(3)                <<<<<<<<<TBF1--------->ANAC46<---------RAP2.6(2)        <----- ---->TEIL   *TSS      <------------------------ANAC81----------->HVH21                      -------- -----CBF   ------------>CBF        <<<<<<<<<TBF1  ------>ZmHOX2a(1)<---------ANAC46        <-------TEIL   aatcttatccataattcaatctcttccaatttctcttcttcttcttcttcttcctcgcgacgcgttaatggcggcttcgttctcactcacgagcttcatc  10018800                                              <-----------ARR10                                             ------>MYB46(1)                                             <---------CCA1(2)                                           <---------MYB111(1)                                        <---------ALFIN1                                        --------->AtMYB61                                       --------->MYB46(3)                                     --------->AtMYB61                                  --------->ANAC46       <-----------GT1            <---------ALFIN1    <---------At4g35610           --------->REM1(1)                           --------->DAG2    --------->At4g35610          -------->P--------->AtMYB61                 ---------->DOF2  --------->REM1(1)              ------>MYB46(1)                            ---------->DOF2 ----->ZmHOX2a(1)  --------->TOE2(3) <---------ALFIN1              --------->MYB46(3)        ------>ZmHOX2a(2) ----At4g35610  <---------CCA1(2)------>MYB83------>MYB83        ----------->RAV1(1)       --------->ARR11(3) ->REM1(1)  --------->AtLEC2   --------->AtMYB61              --------->HSFB2a(2)          <---------ARR11(3)   tccttcatctcaccattcaaatctcaaactaaacctacaccaccaccaaatctcactcttccttctccaacaatctcccaaaggcgaagaaatgatctcg  10018900                                                                  <---------MYB52(1)                                                                 --------->LBD16                                                                <---------ANAC46                                                                <---------ANAC58                                                                <---------ANAC55(1)                                                                <---------ANAC58                                                                --------->ANAC55(2)                                                                <---------ANAC55(2)                       --------->HSFB2a(1)                  <---------ANAC58                       --------->HSFC1(2)               <---------ANAC58                    xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) <---------ANAC58              <-------GAMYB                            <---------ZAT2             <---------MYB46(3)                        <---------At4g35610                     ------            <---------ANAC58 ------>ZmHOX2a(1)         --------->ZAT2                         <------            <---------DREB2C(2)   ------->GAMYB   ------>ZmHOX2a(1)--------->ATHB12         ---------            <---------ANAC58--------->TOE2(3)     ----------->RAV1(2)               <---------ANAC58            <---------RAP2.6(2)  --------->MYB46(3)    --------->At4g35610          <---------ANAC58      --------->ATHB12 <---------HSFB2a(1)        <---------At4g35610           <---------ANAC58     <---------ATHB12  <---------HSFC1(2)    <----------DOF2<---------ANAC58    <---------ANAC58   ctatcgaatcaatggcggtcgaagaaacttcctcaaccgcttcttcactttcctctgagcttgcttccgtgatttgtccctcgcttgcttactccaacac  10019000                                                               ----------->GT1                                                             <---------ANAC58                                                       <------ZmHOX2a(1)               --------->ARR14(2)                 <-----------RAV1(2)            <---------HSFB2a(2)          --------->ARR11(3)  <---------ANAC46         --------->ARR14(2)              <---------ARR11(3)  <---------ANAC58 ->GAMYB <---------ARR14(2)       <-------GAMYB <-----------HVH21 ---ALFIN1  --------->HSFB2a(2)  --------->MYB52(2) <---------At4g35610           <---------ZAT14 -->RAV1(1)<---------LBD16       <---------MYB46(3) --------->At4g35610       <------ZmHOX2a(1)    <-   actcttcttcagttctggatacaatgtgcaagtgtttgttgaagataatgagtcagaggagaggcttgtgaatcgatttaggagagaagtgatgagaact  10019100                                                                                                    <                                                                                                    -                              <----------DOF2                                                --------                          <---------ARR14(2)                                           --------->YAB1                          <---------ARR11(3)                                     --------->YAB1     -                          --------->ARR11(3)                            <---------At4g35610----------                        ----------->ARR10                     <------ZmHOX2a(1)  ----------->GT1    <         <------ZmHOX2a(1)--------->ARR14(2)              --------->TOE1(2)--------->At4g35610      < --------ZAT6       <------ZmHOX2a(1)<---------KAN4(2)    --------->TOE2(2)<---------At4g35610-------   ggtgttatacaggaatgtaagaggagaagatactttgagaataaacaagatgagaagaaacgtaggactcgtgatgctgctaagcgtaataagaaaaggt  10019200  Previous    Next  AGI:  At3g27160.1    Description:  GHS1 (GLUCOSE HYPERSENSITIVE 1); structural constituent of ribosome. similar to structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT5G63300.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82190.1); contains InterPro domain Ribosomal protein S21; (InterPro:IPR001911) Range:  from: 10018713    to: 10020327    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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