Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          <----------DOF2       <---------DAG2       --------->TOE2(3)                                --------->ZAT18 ------>ZmHOX2a(2)                                      <---------ZAT14 ------ZmHOX2a(2)                   ----------->GT1     --------->ZAT14 ------->ARR11(3)       --------->ATHB12                <---------ZAT18 --------ARR11(3)       --------->YAB1          <-------TEIL                                     ---- ---->DOF2             --------->ICU4     ---------->DOF2   --------->ICU4                       <--- -ID1 <------------MYB.PH3(1)     ---------->DOF2    --------->YAB1                       <---------AHL20(2)   agatcgtaacctttttttagatggaatcatggaacagaaagaaaaaaagattcaatagtgaactaattaagtctaacaaatttgatttgtaagtaattga  10012500            --------->AHL20(1)            <---------ARR11(3)            <---------AHL20(1)            --------->ARR11(3)         <---------GLK1(2)    --------->MYB52(1)               <---------TOE2(3)                                        -------  ------>ZmHOX2a(1)                  <---------YAB1                               --------->LBD16 --------->TOE1(3)             --------->AHL20(2)                                <---------LBD16 --------->TOE2(3)      <---------ARR14(2)     <----------DOF2    <-----------GT1--------->LBD16 ----->GLK1(1)          --------->ARR14(2)    ----------------->AGL1            <---------ANAC46 ------GLK1(1)   <---------AHL20(2) --------->YAB1        <---------YAB1  <-----------GT1--------->AHL20(2)   aatccttaacagaatatttttaatcgaatccaattcaataagattactgccttactggttatgtttataaacaatttcacttccctggaaaaaaaataaa  10012600                                                                                               <-----                                                                                               <-----                                                                                               <-----       <-----------RAV1(1)                                                                    -------   <---------AHL20(2)                                                                        <-------   --------->AHL20(1)                                                                       ------->GAMYB   --------->AHL20(2)            --------->ATHB12      <---------WRKY12                  --------->MYB52(1)   <---------AHL20(1)           --------->ICU4         <---------WRKY38(1)      --------->TOE1(3) --->DOF2               --------->ATHB12      --------->AHL20(2) <---------YAB1 --------->TOE2(3)   -   gacaatttattgtcgctaatccgagttgattagaatgatttgactaaattaaaacagtcaactagggattatagattgcaaaccctaaaatcaacggtca  10012700                                                                       --------->TOE1(3)                                                                       --------->TOE2(3) ----WRKY12                                                          ------->TEIL ----WRKY45                                                   --------->AHL20(1) ----WRKY38(1)                                                <---------AHL20(2)            --------- -->WRKY18(1)                                                 --------->AHL20(2)      <<<<<<<<<<<<WRKY18 ----HVH21                                                    <---------YAB1          ---------->DOF2 ---------->GT1   <---------YAB1                             --------->AHL20(2)  ----------->GT1   acgagtgaaaacacataaatatgtttgactaaattactgaagaacaaatagattacaaaacaattttattgaaccctaaaaactggtcaaaagtcaaaga  10012800                                                                              *TSS                 ----------->GT1         <---------YAB1           <---------CCA1(2)<----------DOF2      <---------LBD16   --------->YAB1--------->GLK1(2)   <-----------GT1 <----------DOF2        <--- ->DOF2--------->ANAC46 --------->AHL20(2)           <----------DOF2  <----------DOF2     <----------DOF2   gaaacttacacgggaagagaagtcaataaaaaccctagaaattctgattttgaagctttttttctctcttatctttcttttgaagctttcttctttcttc  10012900                                                                                            ---------                                                                                        -------------                                                                                        -------------                                                                                        -------------                                                            ----------->TGA1<---------AHL20(2)                                                            ----------->HVH21      <---------AHL20(2)           <<<<<<<<<TBF1                                  --------->CCA1(2)<---------AHL20(2)        <<<<<<<<<TBF1            --------->YAB1           --------->At4g35610     --------->AHL20(2)     <<<<<<<<<TBF1 ----------->GT1                    --------->DAG2       --------->AHL20(2)      <-  <<<<<<<<<TBF1  --------->At4g35610                 ---------->DOF2   <---------AHL20(2)------------ -------DOF2     <---------At4g35610        --------->AHL20(2)         --------->AHL20(2)<-----------   tttcttcttcttcttcttcatctgtaaataagaaatcatatcagaaaaaaatacaaaaagagatgacgagagattaattaaatattaaatgccataaaga  10013000      <---------DAG2      --------->TOE2(3)    -------->P   <-----------GT1 <---------MYB52(2) ->DOF2<----------DOF2                                                                --------->YAB1 ---->AGL1       --------->AHL20(2)                        <---------ALFIN1         --------->ANAC58 ---->AGL3    --------->YAB1                              --------->MYB46(3)        --------->ANAC58 ---->AGL2   <---------AHL20(2)                         --------->ARR14(2)       <-------TEIL ----------ARR10 <---------AHL20(2)    <---------TOE2(3)<---------ARR14(2)      --------->CCA1(2) --->AGL15  --------->AHL20(2)        <-----------GT1  --------->GLK1(1)        --------->GLK1(2) ----AGL15  <---------AHL20(2)    <----------DOF2 ---------->DOF2      <-----------RAV1(2)       <---   gaaactaacctttttttaataaaacaattaagagagcttttaacgaatgagagaaaggtatccaccctcagttacaggggagattcaagcatagtttaga  10013100                      <---------------AGL15                      --------------->AGL15                      <---------DAG2       <---------ICU4          --------->AHL20(2)               ---------->DOF2        <----------ID1         --------->AHL20(2)             --------->YAB1          --------->MYB52(1)              ----- ------GLK1(1)        <----------DOF2  --------->ICU4  --------------------->WRI1    <-------TEIL   -   attctccataaataaaaaaacttactttatagtgtattggaataataaaggcatttgatttgtgagtaacgacaaaaccatgttcgattcatcttcaaga  10013200                                                                                       --------->TOE1(2)                                                                            <---------At4g35610                                                                          <-----------GT1          --                                                                   --------->AHL20(2) <---------ANAC58                                                              <---------AHL20(1)      <---------ANAC55(2)    --------->At5g28300     --------->DAG2   --------->AHL20(2)<---------AHL20(2)     <---------ANAC58   ----------->GT1         ---------->DOF2--------->ATHB12    --------->AHL20(1)      --------->ANAC55(2)   --------->LBD16   ----------->GT1     <---------YAB1    --------->AHL20(2)      <---------ZAT14<-- <---------LBD16    --------->DAG2  --------->ARR11(3)     <---------AHL20(2) ----------->HVH21   <-- ---->YAB1         ---------->DOF2  <---------ARR11(3)    <---------AHL20(2)--------->At4g35610   <-- -------->MYB52(1)---------->DOF2 <---------TOE2(3) ----------->GT1<---------AHL20(2)------->TEIL <--   atcaccggtaaaaaaactcgaaaaggcaaaaaagctaagatttatgattaaaaaatgtaatttatatatttattttttatctgactgtacgtgagactat  10013300             <---------KAN4(2)       ---------->DOF2 ------->LBD16 -------AtLEC2                                      --------->DAG2           ---------->DOF2 -------ANAC58                          <---------GLK1(2)                ---------->DOF2 -------ANAC58                    <----------ID1   ---------->DOF2    --------->AHL20(2) -------ANAC46              >>>>>>>>>TBF1   <----------DOF2           <---------AHL20(2)<---------MYB46(3)   gcgtggaagaaaaggaattttcaaatcgaagaagaagagacaaattctttttataaagttgattcttgaaaattaaaaagaaagaaatggtggtcacaat  10013400  Previous    Next  AGI:  At3g27150.1    Description:  kelch repeat-containing F-box family protein. Identical to F-box/Kelch-repeat protein At3g27150 [Arabidopsis Thaliana] (GB:Q9LI89); similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT5G40680.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49001.1); contains InterPro domain Kelch repeat type 1 (InterPro:IPR006652); contains InterPro domain Kelch-type beta propeller (InterPro:IPR015915); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain Kelch related (InterPro:IPR013089); contains InterPro domain Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043 Range:  from: 10010679    to: 10012878    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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