Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    --------->AHL20(1)                                  <---------AHL20(1)                                  <---------ARR11(3)                                --------->AHL20(1)                                --------->ARR11(3)                --------->TOE2(3)  --------->YAB1                <---------ARR11(3)               --------->ANAC46  --------->AHL20(2)         --------->AHL20(2)     <---------AHL20(2)                     --------->AHL20(2) ------->YAB1           ----------->GT1             <---------ATHB12                       <---------AHL20(2) ----->AHL20(2) --------->MYB52(1)--------->ARR11(3)--------->AHL20(2)      ------>ZmHOX2a(1) ->GT1        <---------MYB52(2)<---------AHL20(1)  <---------ATHB51       --------->TOE2(3)   ataataatatttggcaactaatggttcagaaaaaaatattttctcgcataacaaataattcacttaaacgtcaatttcctaaattttgagtttttaaatc  9998700                --------->YAB1         <------MYB46(1)         <------MYB83         ----------->GT1         <---------ANAC55(2)         <---------ANAC46         --------->At4g35610        --------->MYB111(1)        --------->MYB111(2)        --------->MYB46(2)        --------->MYB52(2)                           <---------ATHB12        --------->MYB59                        --------->YAB1       <---------MYB55(1)      <-----------RAV1(1) --------->WOX13(1)                           <----    <---------ZAT6     <---------ANAC55(2)    --------->ICU4                                  -------   accagagtgttaggtgaataagaatacttaaaaatgttgtgctatgaaataatcaatcaaacaaataatccaaatttttagaattttttcgtcgaatagt  9998800        --------->ANAC46        --------->ANAC58        --------->ANAC58                                        --------->TOE2(3)     --------->ZAT14                                     <---------YAB1                            <-     --------->ZAT18                                    <---------TOE2(2)                      <-----   <---------------AtSPL3                          --------->ARR11(3)                     ------->TEIL   <---------------AtSPL8                          <---------ARR11(3)                  --------->MYB46(3)   --------------->AtSPL8                         <---------At4g35610                  <---------MYB52(2) -----ANAC46                                 --------->YAB1<<<<<<<<<MYB98             <-------------- ---->GT1                                 --------->YAB1<---------TOE1(2)  <---------YAB1--------->MYB52(1)   gtataagtgtacgaaatttgcaaaaacccaaatgttattttcaagaatagtaagctcttatgttaaacttaaatgttttcattgtgagaacgaacgtctt  9998900               --------->YAB1                         <---------------AGL15           <---------AHL20(2)                         --------------->AGL15                        <-        <---------------AGL15                        <-----------------AGL2                       ---        ==============================================================MADS_MADS                  ---- ----------GT1 ----------->GT1                       <-----------------AGL3                      ---- -----DOF2--------->AHL20(2)    <---------YAB1      <---------At4g35610                ============== -AtSPL3--------------->AGL15<---------TOE2(3) <----------DOF2                         ---------->DOF2   ttaaacataccatttaatagtaatatgtactaatgttattgaaaacttactttctgctaatattggaagcccattaaactaaggcccatgaaagaaaaca  9999000          <---------ANAC46                                ------->GAMYB       --------->O2                                    --------->MYB52(1)       <---------O2                                   <---------WRKY45       --------->bZIP60(1)                            <---------WRKY38(1)       --------->TGA1a                                <---------WRKY12       <---------bZIP60(1)                           --------->WRKY18(1)       <---------TGA1a                           <---------At5g28300       ======================bZIP_DOF           --------->MYB52(1)              <-----------HVH21    --------->DEAR3(1)                          <---------DOF5.7(2)            --------->ANAC58   --------->DEAR3(2)                           <-----------GT1                <------NtERF2 <---------ALFIN1                          --------->AHL20(2)                  --------->ANAC58 --------ALFIN1        <---------REM1(1)   <---------AHL20(2)                 ------>NtERF2 ------>MYB46(3)      --------->ARR11(3)   --------->AHL20(1)  --------->DAG2<---------ANAC58 ----->ANAC58     ---------->DOF2         --------->AHL20(2)  ---------->DOF2<---------ANAC46 ----->ANAC58    <------ZmHOX2a(1)  ----------->GT1 <-----------HVH21        <---------ANAC58 ================bZIP_DOF      <---------ANAC55(2) ------->GAMYB          <---------DEAR3(1)   cccacaccgacgtcgtataggaaagatgtagtcatgtgaagaaaaaaaattaacggtcaacgggaaaaggaaaacgatggcgcgtcaaatgctaaaccat  9999100                <------NtERF2                 --------->LBD16              <---------DEAR3(1)       --------->ANAC58              --------->ANAC58         --------->ANAC58              --------->ANAC58         --------->ANAC46                    --------->ARR11(3)    ----             --------->RAP2.6(3)  --------->ANAC46                         --------->ARR14(2)  <-----             <---------ORA47(1) *TSS ---------->DOF2                       <---------ARR11(3) <------             --------->SPL7   --------->ATERF1(1)                         <---------CCA1(2)   <------           --------->ETT(2) <---------ANAC58 ------->GAMYB        <---------YAB1              <------        <---------MYB46(3)  <---------ANAC58--------->MYB46(3)--------->AHL20(2)            ---------      <-------GAMYB        ---------->ID1 --------->MYB52(1)  <---------AHL20(2)           --------->DEAR3(1)    <---------TOE2(3)     ----------------------->TaNAC69(2)--------->AHL20(2)            <---------LBD16   taaactacggttgtggacggcaaacgcttgtcgtctccgaaacgcaaccgcagagaacccaaatttatatcattctatatcttctcttcttcaccggcgt  9999200                                                         <---------ZAT2                                                         <---------At4g35610      --------->ANAC58                                   --------->At4g35610      --------->ANAC46                                   --------->ZAT2      --------->ANAC58     <---------ALFIN1   <---------ARR14(2) ----->SPL7              ------->TEIL        <-------GAMYB<---------ARR14(2) ----SPL7               <---------ALFIN1    <---------DEAR3(2) ---ANAC58            --------->ANAC55(2)   <---------MYB46(3) ---ANAC46            --------->ANAC58     <---------RAP2.6(2)       ---------->ID1        <------NtERF2 ---ANAC58            --------->ANAC46     <---------ANAC46 <---------LBD16              <---------DEAR3(1) >LBD16               --------->ANAC58     <---------DEAR3(1) --------->LBD16       --------->YAB1   acaatagcactcaactcttaacttacgcacctctcttctctcatggcggtttcagtctcagctccggttttgtccctctgttacaatcagagcggcgaat  9999300                                                                                      ---------->DOF2                                                                                  --------->LBD16                                                                                 <---------ANAC46                                                                                <---------LBD16                                                                               --------->ALFIN1                              --------->DAG2                  ----------->GT1<---------ANAC58              --------->CCA1(2)  --------->ALFIN1       <---------ZAT14      <---------ANAC58     ---     <---------TOE1(2)       ---------->DOF2        <------NtERF2        --------->ARR14(2)      <---  <---------ANAC46    --------->MYB52(1)          <---------DEAR3(1)     <---------ARR14(2)      ----   tgtctcgtagtttgggatatagactaccgaagaaagtgggatttagctctggtcgtcgttcagtgagttatatcggtttcggtgcggagaaagttggaag  9999400                                                                  --------->GLK1(1)                                                                  <---------GLK1(1)                                                                <---------ICU4                                                               <---------YAB1                                                             <---------At4g35610                                                    =================================HOX2a_HOX2a                                                    ------>ZmHOX2a(2)                                                   <------ZmHOX2a(2)                                                   ==================================HOX2a_HOX2a                                                  <---------ARR14(3)           <---------ARR14(2)                     <---------AGP1--------->ATHB12              <------           --------->ARR14(2)       =======================HOX2a_HOX2a                        <------        <---------TOE1(3)     ------->TEIL        --------->ARR14(2)                          -------   <---------ZAT6         --------------->AtSPL3  <---------ARR11(3)              --------->YAB1  <---------TOE2(3)       --------------->AtSPL8  --------->ARR14(3)             <---------YAB1    --  <---------TOE1(3)      --------->At4g35610      <---------ARR14(2)          <----------DOF2<-------TEIL ------>CCA1(2)          <---------At4g35610      --------->ARR11(3)  --------->ANAC46     --------->ARR14(2) ------ARR11(3) --------->ARR14(2)  ------>ZmHOX2a(1)     <---------At4g35610 ------>ZmHOX2a(1)------ ----->ARR11(3) <---------ARR14(2)  ======================HOX2a_HOX2a <---------ETT(1)     <---------ARR14(2)   atttagggttagggttccgatttgcagagctgtacctcctctcttgttcaaagatctcgatgctgatgatttccgacatccttttgataagcaggtccgt  9999500                                                                              <---------ANAC58 <---------GLK1(2)                                                            <---------ANAC46 ---ANAC46                                                       <------MYB83 <---------ANAC58 ---ANAC55(2)                                   --------->bZIP60(1)         <---------ANAC46 ---->GT1         --------->ATHB12              <---------bZIP60(1)      <----------DOF2 ------->ICU4    <---------YAB1            --------->YAB1        <------MYB46(1)               <----- --->LBD16       --------->ICU4         <----------DOF2          ----------->GT1   <-----------HVH21   aaaaattctccaaatggtcgtaattggaaactatatatcaaactttgatgatgtgatttgaaatatttggttactcttttgtgtgtgtcactgtgttctt  9999600  Previous    Next  AGI:  At3g27110.1    Description:  peptidase M48 family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO49009.1); contains InterPro domain Peptidase M48, Ste24p; (InterPro:IPR001915) Range:  from: 9999132    to: 10001467    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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