Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100     --------->ANAC46                                                      <---------AHL20(2) ------->CCA1(2)                                                         --------->AHL20(2) -------AHL20(1)                                                        --------->ICU4 ------>AHL20(1)                                                        <---------ATHB12 ----->AHL20(2)      <----------ID1                                   --------->WOX13(1) >MYB83           ---------->DOF2                                  --------->ANAC58 >MYB46(1)    --------->TOE1(3)                <---------ATHB12    --------->ANAC58 --MYB59    ------->TEIL             <---------ATHB51             --------->DAG2 ------->AGL15--------->YAB1         --------->AHL20(2)          ---------->DOF2 -------->AGL3--------->TOE2(3)      <---------AHL20(2)   <---------AHL20(2) -GT1      <---------GLK1(2)       --------->YAB1         --------->AHL20(2) <---------ICU4   tatataagaaactgaatcttaaaagaacaaattttaaaaataattctaaatcaattgaatttttttaaaaagcaattaataagtatatgttatggaattt  9990400                                                                                 <---------AHL20(2)                                                                                 --------->AHL20(2)                         --------->AHL20(2)                         --------->ANAC55(2)                     ----------->GT1                                <---------ANAC55(2)            ------------------------>ANAC81                         --------->ANAC46             ----           ---------->DOF2   --------->AHL20(2)                    <---------LBD16           --------   --------->YAB1  ---------->DOF2  <----------DOF2    ---------->DOF2          --------->AHL20(2)   tagaatcatataagaaagaagaaaagaaaaaataaaaacttttattttgtttatttctaaagtcactaatacgggacttaaaaaaaatttgaaaacaaag  9990500                                               --------->ARR11(3)                                               --------->GLK1(2)                                               <---------ARR11(3)                                ----                                              --------->RVE1(1)                                  ----                  ---------->DOF2             --------->CCA1(1)                                <-----    --------->AHL20(2)                      --------->AHL20(2)                                 ------   --------->AHL20(2)                <---------TOE2(3)                                    --------->AHL20(2) ------->GT1<------ZmHOX2a(1)       ---------->DOF2<---------YAB1               --------->HSFB2a(2) -->DOF2---------->DOF2<----------DOF2----------->GT1               <----------DOF2   <---------ICU4   agtaaataaaaaaaggatgggaaagctttaaaaatttttaaagtaaaaaaatcttgattcacaaaaaaaactttgaagacttctaaaatcattttaaaat  9990600                                                                      -------------->OsCBT                                                                    <---------ANAC55(2)                <---------ICU4                                      <---------ANAC58                --------->YAB1                       ----------->RAV1(2)           --------->MYB46(3)                        <---------At4g35610      --------->SPL7          --------->ANAC58                           --------->At4g35610      <---------LBD16          --------->ANAC58                         <---------ZAT14  <---------ANAC58      --------->TOE1(3)                            --------->ZAT14<---------ANAC46      --------->TOE2(3)                            --------->ETT(2) --------->ANAC55(2) ----->TOE1(3) <---------ATHB12                    <---------ETT(2) <---------ANAC46 ----->TOE2(3)------>MYB46(1)             --------->ANAC58     ----------->HVH21 ------------>CBF ----ARR11(3) ------>MYB83                --------->ANAC58     <---------ATHB12--------->ANAC58  ---- --->ARR11(3)--------->WOX13(1)         ---------->DOF2        ----------->TGA1--------->ANAC58 -----   cttaaaaacctcaaccaatcatccccttcaattttcaaaattgaaagctactgtctactgaggcaatgacgcgtgtttgctacggcaatggcagaacaac  9990700                                                                      <------------CBF                                                                     --------->ATHB12                                                                    <---------ATHB12                                                                    --------->MYB46(3)                                                                   -------->P                                                                 <---------MYB111(1)                                                                 --------->AtMYB61                                                                 --------->MYB46(3)                                                                 ------->GAMYB                                                                <---------ATHB12                                                                --------->DEAR3(2)                                                                <---------MYB55(2)                                                                <---------MYB52(2)                                                               --------->ANAC58                                                               ------>MYB83                                                               -------->P                                                               --------->ANAC46                                                               --------->ANAC58                                                               ------>MYB46(1)                                                           <------ZmHOX2a(2)                                                           ========================HOX2a_HOX2a         ---------->DOF2                                  <---------ARR14(2)  <---------ATHB51                               <---------ARR11(3)------>MYB46(1)  <---------AHL20(2)                   --------->GLK1(2)  --------->ARR14(2) *TSS  --------->AHL20(2)   --------->ARR14(2)     --------->AHL20(2)--------->MYB46(3) ----->TOE2(3)         <---------ARR14(2) <---------YAB1  --------->AGP1    <------ZmHOX2a(1) ------>GT1     --------->ALFIN1---------->DOF2  --------->ARR11(3)------>MYB83   gtaaataattcaaaagatgagggggtatttgggtaaaagagtttctgataaaatctcacagatccaaccaaccattgaggaccatttcttctctctcatt  9990800             <-----------GT1          --------->ALFIN1                        --------->GLK1(1)        <---------O2                             <---------ARR14(2)        <---------ANAC58                         --------->ARR14(2)        <---------ANAC58                       --------->LBD16        --------->TGA1a                      <---------LBD16            xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)        <---------TGA1a                     ------>NtERF2               <xxxxxxxxxxxxxxxxsmallRNA(i)        <---------ANAC55(2)               --------->SPL7                >>>>>>>>>TBF1        --------->ANAC55(2)             <---------SPL7                 <xxxxxxxxxxxxxxxxsmallRNA(i)        <---------ANAC46                <-----------HVH21              xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)        --------->O2                   --------->ANAC58              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)        <---------ANAC55(1)            --------->TGA1a            >>>>>>>>>TBF1        <---------bZIP60(2)            --------->O2       --------->ARR14(2)      <---------TGA2(2)                <---------O2   <---------LBD16>>>>>>>>>TBF1          <--------     ----------->TGA1                  <---------TGA1a<---------HSFB2a(2)                   ---------     ----------->HVH21                 --------->ANAC58   <---------ARR14(2)              --------->DAG2   <---------At4g35610               <---------ALFIN1 --------->HSFB2a(2)               ---------->DOF2   --------->At4g35610              ------>ZmHOX2a(1)<---------ANAC46<xxxxxxxxxxxxxxxxsmallRNA(i)   ----------->RAV1(2)    --------->ARR14(2)<------NtERF2<------ZmHOX2a(1)          ----------->RAV1(1)   ctctcttctgacgtgtttcccttcttcggtttctcatcctcacgtccgccggatttcgaggaaacgaagaagaagaagaacaacaacaacaaaaggtctc  9990900                                                                            <---------LBD16                                                                         --------->RVE1(1)                                                                        --------->ARR11(3)       <---                                                                        --------->GLK1(2)       <----                  <----------DOF2         <-----------RAV1(1)           <---------ARR11(3)  -------->P     --------->GLK1(2)     --------->YAB1 <---------ZAT6        <---------At4g35610         <-------- -ARR11(3)     <-----------GT1        <---------ZAT14           --------->At4g35610        <--------- >ARR11(3)    <---------CCA1(2)  <---------MYB52(1)   <----------DOF2  <---------GLK1(2)------->TEIL   tctcgagtttctatgtttatctttttctataatcccttagtctagtgttgtttagactttcaattctgctccaaaatctctggatttttgaatctaccgt  9991000          <---------GLK1(2)     --------->HSFC1(1)                                      --------->GLK1(2)     --------->HSFB2a(2)                                     ------->TEIL     <---------HSFC1(1)                                   <---------YAB1     <---------HSFB2a(2)                                --------->YAB1 ----TEIL --------->ARR11(3)                          <---------WOX13(1)                        <---- -----MYB52(1)                                 --------->ARR11(3)                               <---- -At5g28300--------->GLK1(2)                   <---------ARR11(3)                               <---- --GT1    <---------ARR11(3)            <----------DOF2--------->ICU4  --------->GLK1(2)      <------   tcattttctagagattttggtttctctcagtctaagagtcgtcttttgaaatcttgaatgatgaatctgagagtttctatgaaatttgatggaattttgt  9991100      <---------MYB46(3)                                         <------MYB46(1)    <---------At4g35610                                          ----------->GT1    <-------GAMYB                                      <------MYB46(1) -----ANAC58      --------->ALFIN1          <------MYB46(1)      <------MYB83 -----ANAC46   <---------TOE1(3)            <------MYB83  <-------TEIL       --------->TOE2(2) <----- -----ANAC58   <---------TOE2(3)  <----------DOF2      <------MYB83       <-----------GT1------>ZmHOX2a(2) ---ANAC46--------->ATHB12     <---------ARR11(3)     --------->MYB59 <---------YAB1   --------->ARR11(3)   gtgttcagttgttgattagggtttgggattcaataactttcaaatttggtttcgattaggttcgatttggttatttttacctgtgaattgatctcgattc  9991200                                                                          <------MYB83                                                                          <------MYB46(1)                                                                 <---------HSFB2a(2)                                                                 --------->HSFB2a(2)                                                              --------->GLK1(2)       <---------TOE2(1)                                                             <---------GLK1(2)        <---------TOE1(1)                                                            --------->At4g35610     --------->CCA1(2)                                                    --------->CCA1(2)     <---------ANAC55(2)   -----                                                   --------->ARR11(3)    --------->MYB46(2)     <----                                                   <---------ARR14(2)    --------->MYB59    <--------      <---------TOE2(3)             <---------YAB1 --------->ARR11(1)--------->WOX13(1)   <----------     <-----------GT1    <---------AHL20(2) <---------DAG2   <---------ZAT2--------->ANAC55(2) <------ --TEIL      <----------DOF2  <---------YAB1<----------DOF2 <---------At4g35610   --------->At4g35610   gttgtattaacgtctctttgtgtttttttattctgtttatgctagccttttgagatatggacagcttctggcaattaggtgatgagctacgaggtcagac  9991300  Previous    Next  AGI:  At3g27090.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G42050.1); similar to hypothetical protein [Citrus x paradisi] (GB:CAA04664.1); contains InterPro domain Kelch related (InterPro:IPR013089); contains InterPro domain Development and cell death (InterPro:IPR013989) Range:  from: 9990777    to: 9993063    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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