Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100      ------>NtERF2   --------->ANAC46   --------->ANAC58   --------->ANAC58  <-------PIF5                                                           <---------At4g35610  ------->PIF5                                                           --------->At4g35610  <-------MYC2                                                     --------->At4g35610  ------->MYC2                                                     <---------At4g35610  ------->MYC3                                                <---------ANAC58  <-------PIF4                                             --------->GLK1(2)  ------->PIF4                                             <---------ARR14(2)  <-------MYC3                                             --------->ARR14(2)              --------->ALFIN1 <---------ATERF1(1)                                    <---------YAB1<-------TEIL       <---------ANAC58 --------->ANAC58                             --------->GLK1(2)  <-----------RAV1(2)     <---------ANAC46 --------->ANAC46             ---------->DOF2--------->ARR14(2) <---------MYB52(1)       <---------bZIP60(2) --------->ANAC58       ----------->HVH21    <---------ARR14(2)<-----------HVH21         <---------ANAC58 ---->DOF2             --------->TOE1(1)     <---------GLK1(2)<---------ANAC55(2)      <------ZmHOX2a(1) >GT1<------NtERF2     --------->TOE2(1)   ----------->ARR10  <---------ANAC58 ---------->DOF2   agcacgcgcctcagagacttgaacatcggacatgaagcgagaagcgagattctctagtacgattccgtcagatgcagcgaagaaagcgaggacgtgtttg  9982100                 <-------GAMYB                <---------MYB46(3)                      --------->ARR11(3)              <-----------HVH21                   <---------YAB1             --------->DEAR3(1)               <---------ANAC58           <---------At5g28300           <-------GAMYB  --------->AGP1 <---------MYB46(3)         <-------TEIL                   <---------MYB46(3)------>ZmHOX2a(2)        <---------YAB1         --------->WRKY38(1)           <---------ANAC46 <---------ARR11(3)       --------->YAB1    <-        --------->DOF5.7(2)            <------NtERF2    <---------AGP1<---------DEAR3(1)        -----      <---------ANAC58                <---------LBD16   --------->ARR14(2) <---------HSFB2a(2)  <----      <---------ANAC58               ------------>AtMYB77<------ZmHOX2a(2) --------->HSFB2a(2) ------      <---------ANAC46             <-----------HVH21 <---------WOX13(1)<---------DEAR3(2)   <--------   ----------->HVH21          <-----------GT1 <---------ANAC58     <---------DEAR3(1)       <--------   atgaagtgacgttcaccgtcgttgagactgttttcccagtcgcggttgtcttgtgatagatctacttcttcggcggtccagaatgatgcttcggcttttt  9982200                 <XXXXXXXXXXXXXXXXXXXXMIR851-5P         <------MYB83                 <---------MYB46(3)                     <------MYB46(1)<----------DOF2             ------>ZmHOX2a(2)                         <---------DEAR3(1)            --------->CCA1(2)                          <---------AtMYB61            <------ZmHOX2a(2)                          --------->MYB111(1)           <---------AGP1                              <---------MYB46(3)           --------->AGP1                              --------->MYB111(2)           --------->ARR14(2)                          --------->MYB46(2)           <---------ARR14(2)                          --------->MYB55(2)           --------->ARR11(3)                         <---------MYB55(1)           <---------ARR11(3)                 <-----------HVH21       --------->ARR14(2) ----------GT1<-----------RAV1(1)         --------->GLK1(2)           <---------ARR14(2) ---------->AtSPL8                        --------->ARR14(2)       <---------DEAR3(1) -----------AtSPL8                        <---------ARR14(2)      <---------At4g35610 --------------->WRI1----------->GT1     <---------GLK1(2)<---------ZAT6    --------->HSFB2a(2) -DAG2    <---------CCA1(2)          <-------TEIL     <--------P<------ZmHOX2a(1) --DOF2<---------LBD16           <---------KAN4(2)   <-------GAMYB--------->At4g35610       <--------   tgtacatttcccagatctgtgggtagtgaattgggaacatacagaatctgtctggggttggtgttaggagcggctcttctggcattgaaggcatctttga  9982300                                                                  ------>ZmHOX2a(2)                                                                  =============================HOX2a_HOX2a                                                                 ==============================HOX2a_HOX2a                                                                 <------ZmHOX2a(2)                                                                 --------->CCA1(2)               <---------WOX13(1)                               --------->AGP1             --------->ATHB12                                   --------->ARR14(2)            <---------YAB1                                      <---------AGP1          --------->CCA1(2)                                     --------->ARR11(3)         <---------ARR11(3)     <---------WOX13(1)              <---------ARR11(3)          <--------         --------->ARR11(3)   --------->ATHB12            --------->YAB1         <---------AHL20(2)         <---------ARR14(2)  <---------YAB1      <---------WOX13(1)              --------->AHL20(2) --DOF2  --------->ARR14(2)--------->CCA1(2)   --------->ATHB12 <---------ARR14(2)      <------ZmHOX2a(1)   agggatttgaagatttgattgaagaagagatttgattgaagagattgtttgattgatgaattataagatctagggctgaatatttatataggagattata  9982400                                                                                                -----                                                                                               <-----                                                                                               ------                                                                                        <---------ANAC58                                ----------->GT1                                        <---------HSFC1(2)                               ----------->GT1                                         --------->HSFC1(2)                          --------->REM1(2)                                           --------->GLK1(2)                         ----------->HVH21                                        <---------HSFB2a(2)                       <---------ANAC58                                           <---------HSFC1(1)                       <---------ANAC46                                           --------->HSFC1(1)                       --------->O2                    <---------AHL20(2)         --------->HSFB2a(2)                       <---------ANAC58           --------->ICU4                 <---------ANAC46   -                       --------->TGA1a        ----------->GT1                <XXXXXXXXXXXXXXXXXXXXMIR841                       <---------O2          ----------->GT1                <------MYB46(1)   <------ -YAB1                 <---------TGA1a     <------ZmHOX2a(1)                <------MYB83<---------ANAC58   gggttttggggtttttgaatttttgacgtgaagagggaaaatagaggagggaaatattaaaaatgtttgaaatttgtttggtttcgagaagcttgttcgg  9982500                                  <---------REM1(1)                                --------->At4g35610       ------>MYB83                              < ---->LBD16                  <------ZmHOX2a(1)   ------------>CBF                                   - ----HSFB2a(2)      <---------ANAC58            --------->TOE2(3)                            -------- --->HSFB2a(2)      <---------ANAC58       <---------YAB1 ------>MYB46(1)                   --------- -------->ICU4  ---------->DOF2 *TSS   ----------->GT1  --------->MYB46(3)              <---------ZAT6 ---LBD16---------->DOF2   <---------TOE2(3) >>>>>>>>>>GATA-1                         ----------->GT1   gaatttttatccaaagaaaaaagcttgttgaggaagatgaagggtattatcgtcaatacccactgagatttagccttggaagcgagggaagtgataaagt  9982600     ----------->RAV1(1)   <------NtERF2                                                                       <---------ANAC55(2)  --------->RAP2.6(2)                                                                  --------->ANAC55(2)  ------>NtERF2                                                                       ------->TEIL  <---------RAP2.3(1)                                                                 <-------TEIL  <---------ATERF1(1)                                                                 --------->SPL7 --------->ATERF1(2)                                                                  <---------TOE1(2) <---------ANAC46       ------>NtERF2                                             <---------------AtSPL3 <---------RAP2.6(2)    --------->LBD16                                       <---------PCF2 <---------DEAR3(1)    --------->LBD16                                        ----------->HVH21 <---------ATERF1(2)   <---------ANAC46                                      <------NtERF2------->TEIL ---------LBD16--------->AHL20(2)                                           <---------MYB46(3)      < -------->RAP2.6(3)   <---------LBD16      <-----------GT1                 <---------ANAC46         < ->DAG2 --------->TOE1(2)      --------->YAB1--------->ANAC46  --------->ANAC46  <---------ANAC46   < ->DOF2 --------->TOE2(2)  <--------P----------->GT1 ----------->GT1       --------->ALFIN1<---------   ttggcggcaacatgcgataaatttgccgggtaagtataagggtataaacgacattttgttaaaactcgaaactcttggtggggacgcgtacgtatgtggt  9982700                              ------>MYB46(1)              <------NtERF2                              ------>MYB83                 >>>>>>>>>E2Fd                              <---------TOE1(2)           ------>NtERF2                              <---------TOE2(2)          --------->ANAC58                            --------->TOE1(2)            --------->ANAC46                            --------->TOE2(2)            --------->ANAC58                          ------->TEIL                  <-------MYC2                       --------->ANAC46                 ------->MYC2                       --------->ANAC58                 ------->MYC3   <---------TOE1(2)   --------->ANAC58                --------->ANAC46 ---------ANAC58    <-------TEIL                       --------->ANAC58                   --------->AHL20(2) ---------ANAC58 <---------ANAC46                      --------->ANAC58          ---------->DOF2 ---------ANAC46--------------->AtSPL3  --------->ALFIN1<-------MYC3         ----------->GT1        - --RAV1(1)      <---------------AtSPL8  <-----------RAV1(1)>>>>>>>>>E2Fc     <---------ZAT6--------->YAB1   tctcgtgtgttttcatgtgaggtacacgcacctacgtttgatgtgttgcgatgttacacgcgccaaaatgtgttttagagagttaaagcccattaataag  9982800                                                               --------->GLK1(2)                                                            --------->ANAC58                                                            --------->ANAC58                                                       <---------ZAT18                           --------->YAB1              --------->ZAT18                        --------->YAB1--------->YAB1   <------NtERF2                       <---------AHL20(2)            <---------RAP2.3(3)           --------->AHL20(2)                      --------->AHL20(1)            <---------ANAC46          --------->AHL20(2)  <---------ATHB12    <---------AHL20(1)          --------->ALFIN1            <---------AHL20(2)----- -------->MYB52(1)    --------->AHL20(2)<---------YAB1------>NtERF2      <---------TOE2(3)   <-------   cccaatggatttatcggaccagaatataatcatataagtattgtaattggacttgggggcacaagaatcaagtttgatgtttaaattaaaccgaaacgaa  9982900                --------->MYB52(1)               ----------->HVH21                 --------------->AtSPL8             ----------->RAV1(2)               ------>MYB83            ------->TEIL                       ------>MYB46(1)            --------->GLK1(2)             <-----------GT1 -->TEIL--------->YAB1              <---------MYB59 --MYB52(2)--------->ARR11(3) <---------YAB1 <---------MYB59            <------ZmHOX2a(2)   ccaagttttataagaacctgaccgatagaattctaataccgaattaaccaaattgtactctcaaatttgatgcgatcgaaccgaataaacttgatatact  9983000  Previous    Next  AGI:  At3g27060.1    Description:  TSO2 (TSO MEANING 'UGLY' IN CHINESE); ribonucleoside-diphosphate reductase. Identical to Ribonucleoside-diphosphate reductase small chain C (TSO2) [Arabidopsis Thaliana] (GB:Q9LSD0); similar to RNR2/RNR2A (RIBONUCLEOTIDE REDUCTASE 2A), ribonucleoside-diphosphate reductase [Arabidopsis thaliana] (TAIR:AT3G23580.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64484.1); contains InterPro domain Ribonucleotide reductase-related; (InterPro:IPR012348); contains InterPro domain Ribonucleotide reductase; (InterPro:IPR000358); contains InterPro domain Ferritin/ribonucleotide reductase-like; (InterPro:IPR009078) Range:  from: 9981103    to: 9982532    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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