Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  ---------->DOF2                                                                          <----------DOF2                      --------->ANAC46                                   <---------ICU4            --------->ANAC55(1)                                       --------->WOX13(1)     <---------------AtSPL8                                         <---------YAB1 ------>YAB1--------->ANAC46                                       <-----------GT1 ------ATHB12  <-----------GT1           >>>>>>>>>>AtWER         --------->AHL20(2)         <-------- --->WOX13(1)  ------->TEIL       <---------AHL20(2)             <---------AHL20(2) --------->ALFIN1-   tcacaatgtagtacatgtaactaaacacaatcccattttatctccaactggaactagtctcttcaaatttatcaatcttttctaaagtgttgtacttttg  9980500                                                                                   --------->YAB1                                                                            --------->MYB46(3)                                                                       --------->ANAC46           ---                    <---------ICU4                                   --------->MYB46(3)   <----------                    --------------->AtSPL8                      --------->ZAT6 <---------ALFIN1   ---    --------------->AGL15                               --------->ANAC46 --------->MYB46(3)     ----- --DOF2    <---------TOE2(3)     <-----------GT1        --------->ANAC58------>MYB46(1)  --------->AHL20(2) -------->ZAT18     --------->YAB1                      --------->ANAC58------>MYB83     <---------AHL20(2)   tgttcacaaaattaagaaacaataagtactccattatacaatctcatccaacttgaaaacgacattactctaccaacaacaacactcttaattaactaca  9980600                                                                                         <-------TEIL                                                                                        --------->GLK1(2)                                                                                        --------->ARR14(1)                                                                                       <---------ARR14(2)                                                                                       --------->ARR14(2)          <---------ATHB12                                                             <---------GLK1(2)        --------->YAB1                                                                <---------GLK1(1)    --------->YAB1                                                                    <---------HSFB2a(1)   <---------ATHB12                                                                   --------->HSFB2a(1)   --------->ICU4                                                                     --------->GLK1(1)  --------->ANAC58                                                                  <------NtERF2  --------->ANAC58                                                                <---------ANAC46 ------>ANAC58       --------->ANAC58                                             <---------DEAR3(1) -GT1--------->TOE2(3)                        <---------GLK1(2)                 <-----------HVH21 ------>ANAC58       --------->ANAC58 --------->YAB1                        --------->ANAC46 ----->DOF2    --------->YAB1         --------->AHL20(2)   <-----------GT1<---------ALFIN1  <--------   aagcaagcattaatcactaataaacgcataatcgaaacaattatacaaaattctcagtttctaacctgtttgtcatccacagcgtcggagattcgtttct  9980700                                                                                              <------                                                                                              -------                                       <---------AHL20(2)                         <---------GLK1(2)                                      --------->AHL20(2)              --------->ANAC58        -------               <---------ATHB12       --------->YAB1                  --------->ANAC58        -------              ------>MYB46(1)    <---------ATHB12                     --------->ANAC46 --------->ZAT14  --------->At4g35610          --------->WOX13(1)             ---------->DOF2  --------------->AGL15  <---------At4g35610    <---------ATHB12               --------->TOE2(3)     ----------------->AGL1 -MYB52(1)    ------>MYB83  ------->TEIL                --------->TOE1(3)    --------->MYB52(1)    <-   tcacatctgagaaaccaaacatttgcaatgaatcaatcaataaaaatgaattcaaaaaccttaacaaagaacacacaattaccagattgtgaagtcaagt  9980800                                                                 ------>NtERF2                                                                --------->ANAC58                                                                <---------bZIP60(1)                                                                --------->bZIP60(1)                                                              <---------ATERF1(1)                                                              ------>NtERF2                                                             --------->DEAR3(1)                                                             <---------O2                                                             --------->O2                                                             <---------DEAR3(1)                                                          ----------->HVH21        <------ZmHOX2a(2)                                 --------->DEAR3(1) ---ANAC55(2)                                            <---------At4g35610 -->ANAC55(2)      <-----------GT1                 <----------DOF2 -->ANAC58    ----------->GT1                    --------->ZAT2 --------->ANAC58                    - -->ANAC58---------->DOF2      <----------DOF2   <---------ZAT2 --------->ANAC46                 ---- --------------------WRI1    <----------DOF2  --------->LBD16----------->HVH21           <----------DOF2   aatcgaatcgatcaaagagataaaccatttgctctttcgtcaacatccccgagctttgcagcgacgacgccattgccccaaaaaaaaaactctttggagc  9980900                                                                                            <--------                                                                                            <--------                                                                                    <---------ANAC58                                       --------->MYB52(1)--------->TOE1(3)          <---------ANAC58     ----------->GT1            <---------YAB1  <---------ZAT18               <---------AHL20(2)    --------->ALFIN1        --------->AHL20(2)  --------->ZAT18               --------->AHL20(2) --------->DOF2      ----------->RAV1(1) <---------ANAC55(2)            ------------>CBF---------->ID1 ------->RAV1(1)    <----------ID1  *TSS<---------LBD16  --------->TOE2(3)   --------->AHL20(2) -----   cacaaagtgggaaattgggaatgccacaaataatatgaaaatgacggaagtgcccttaaccttaatttcttctgtccaattttattccttgtcgcttttc  9981000                ------>ZmHOX2a(1)                <----------DOF2               --------->TOE2(3)            --------->ARR11(3)  <---------AHL20(2) <---------AHL20(2)  <---------ANAC58                <-------TEIL --------->AHL20(2)  <---------ANAC58   <----------DOF2 --DOF2 <-----------GT1       <----------DOF2--------->ATHB12                                   ----- -DAG2 --------->AHL20(2) ---------->ID1<---------DAG2 --------->TOE2(3)                 --------->At4g35610 ---->YAB1  <---------ARR11(3)<---------DAG2<---------YAB1       ---------->DOF2         <---------At4g35610   atattaatttttaatatcctttgtcttggtcgctttttgaaactttatcattggattcattaatcgaataagccctaattcatggagattaagctgaaga  9981100                    <---------ICU4                    -------->HAHB4                    <---------AHL20(2)                   <---------YAB1                   <---------ATHB51                   --------->At5g28300                   --------->ICU4                    ----------->GT1          --------->ANAC58                          --------->ANAC46             <---------ICU4          --------->ANAC46               <---------TOE2(3) --------->YAB1        --------->YAB1          --------->ANAC58 --------->AHL20(2)       --------->ANAC58             -------->HAHB4        ---------->DOF2    <---------AHL20(2)       --------->ANAC58            <---------YAB1    <------ZmHOX2a(1)    --------->TOE2(3) --------->YAB1  -------->HAHB4       --------->ICU4   ----------->GT1 <---------ATHB12    --------->TOE2(2)  --------->ICU4   --------->YAB1       ----- ----->DOF2     --------->AHL20(2)     --------->TOE1(2)--------->YAB1     ----------->GT1    <------   aagagaggataaaagcaactaattattcattaattcaaaaaccaaggataatacacggtaataatacaagagtagaatcgtaattatagcatcaaaacaa  9981200                                                                                                   --                                                                                                   <-                                                          <---------DOF5.7(2)                     <--          <---------ARR11(3)                            --------->DOF5.7(2)                       ---          --------->ARR11(3)                      <---------MYB52(1)                            <----          <-----------ARR10                       --------->DOF5.7(2)                          ------          --------->GLK1(2)                      <-------GAMYB                                 ------         --------->RVE1(1)                     <------NtERF2--------->ZAT6      <----------DOF2------   <----------DOF2                            ------>NtERF2<---------TOE2(3)   <---------DAG2 ------- ---->MYB52(1)                               --------->ANAC46            ------->GAMYB       -------- ---MYB52(2)      --------->ETT(2)    <---------YAB1 <---------YAB1   --------->MYB52(1) --------->MYB46(3)   acgctctttaaaaatcttcgtcgagagagaagacatggttatcaaacgcgccgttaccattaacgctagacataacggaagccttttggtaatcaccaac  9981300                                                                                    --------->ANAC58                                                                                   --------->SPL7                                                                                --------->ANAC46    <---------HSFC1(1)                                                          --------->ANAC55(2)    --------->HSFC1(1)                                                         <---------HSFB2a(2)    --------->HSFB2a(2)                                                        --------->HSFB2a(2)    <---------HSFB2a(2)                                                      -------->P ----->MYC3                                                                  ------>MYB46(1) ------MYC3                                                                  ------>MYB83 -------ANAC55(2)                                                       <---------ALFIN1      ------- ------>ANAC55(1)                                                    --------->ZAT14--------->ANAC58 -----ALFIN1                                                         <---------SPL7------->TEIL >MYB83                                                            --------------->AtSPL3     ------- >MYB46(1)                                                         --------------->AtSPL8  --------->ZAT18 -->P                                                       ----------->GT1--------->AtMYB61 -------- ---->RAV1(1)                                       --------->MYB52(1) --------->SPL7      <---------ZAT18 ->AtMYB61    <-------TEIL    ----------->GT1    <---------ATHB12<---------ALFIN1<---------SPL7   ---   acgtttctcgaagaaattcgttttcccttgaagtgaaataagttccatccaatcgaacggattagtaacaccgtacaccttcccgtacccaagcgcaccc  9981400  Previous    Next  AGI:  At3g27050.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO49017.1) Range:  from: 9979332    to: 9980936    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g27060.1    Description:  TSO2 (TSO MEANING 'UGLY' IN CHINESE); ribonucleoside-diphosphate reductase. Identical to Ribonucleoside-diphosphate reductase small chain C (TSO2) [Arabidopsis Thaliana] (GB:Q9LSD0); similar to RNR2/RNR2A (RIBONUCLEOTIDE REDUCTASE 2A), ribonucleoside-diphosphate reductase [Arabidopsis thaliana] (TAIR:AT3G23580.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64484.1); contains InterPro domain Ribonucleotide reductase-related; (InterPro:IPR012348); contains InterPro domain Ribonucleotide reductase; (InterPro:IPR000358); contains InterPro domain Ferritin/ribonucleotide reductase-like; (InterPro:IPR009078) Range:  from: 9981103    to: 9982532    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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