Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                <--------ATHB1                              <---------AHL20(2)       --------->AHL20(2)                              --------->AHL20(2)--------->MYB52(1)                              <---------ICU4   ------->GAMYB                              --------->ATHB51<---------MYB111(1)                             --------->ICU4   <------------MYB.PH3(2)      <---------ZAT14     <-----   <---------DAG2          --------->YAB1     <---------MYB111(2)      <------ZmHOX2a(1)  <---------MYB52(1)   <----------DOF2     <---------ZAT6         <---------MYB52(2)      --------->ZAT18   <-----------RAV1(1) ---------GT1          ----------->GT1        <---------MYB46(2)      <----------ID1<---------ZAT14   ttacacttttcatgtgaacttcttagtgttaataatttcaagtttgcaactaactaattcaataccatcaagaggactaaacagacaatactgttgttta  9975100        --------->ANAC58        <---------ANAC55(2)                              --------->ANAC58        --------->ANAC58                       --------->At5g28300                                <--        --------->ANAC46                      ----------->GT1                             --------->GLK1(2)        --------->ANAC55(2)           ------>MYB83       --------->ANAC58                 <---------ARR11(3) ------GT1            <----------DOF2 ------>MYB46(1)    --------->ANAC46                 --------->ARR11(3)   cgatatgtctacgtaagaaaacctctttgtttcttaaaccaaacaaaacagtgaattacacacaattcaagtgaaataaaaactgacttaaaaatctaat  9975200                                                                                              -------          ---------->DOF2        <---------AHL20(2)                             --------->ANAC46 --------->TOE2(3)       <------ZmHOX2a(1)                  ------->TEIL        --------->ANAC58 ---------GT1  >>>>>>>>>>GT-3b  --------->AHL20(2)          <-------TEIL        --------->ANAC58   ttacattaatacaaaagaaaaataagaggagagatttaatatttgtttcatattagccgatgtacatgtgaatttggagagcaagcaagagaatacaaac  9975300                                                                                 --------->LBD16                                                                                 <---------TOE1(2)                                                                                 --------->ANAC46                                                                                <---------HSFB2a(2)                                                                                --------->HSFB2a(2)                                                                    --------->ANAC46       --------->AHL20(2)                                         --------->AtMYB61     ----------->GT1                                              <---------ALFIN1  <---------ARR14(2)   --------->ZAT14                                 <---------HSFB2a(1)          <---------LBD16<-----   --------->ZAT18            ------->GAMYB        --------->HSFB2a(1)    --------->AtMYB61    ------   <---------ZAT14         --------->MYB52(1)     <-----------------------TaNAC69(2)--------->ARR14(2) -->ANAC46              --------->YAB1        ----------->HVH21  --------->MYB46(3)<------ZmHOX2a(1)   aagagtgaagtaaataagagtatgaacaataaccgagagaccacttgtctgaaacgttccaaactcaaccactcgacctctcccaggaacttgaatcagc  9975400                                ------>NtERF2                              --------->LBD16                           <---------At5g28300                          <---------ALFIN1                --------->At4g35610            ----------->RAV1(1) ----------->RAV1(1)<---------ATHB12       --------->ANAC46          <---------At4g35610--------->DEAR3(1)  --------->WOX13(1)       <---------ALFIN1          --------->At4g35610--------->ANAC46 ----------------->AG      <---------ALFIN1   --------->LBD16       ----------->HVH21    <-----------------AGL1  ===============HOX2a_HOX2a  --------->LBD16       <-----------TGA1      ----------------->AGL1  <------ZmHOX2a(2)  --------->ARR11(3) <---------LBD16        <-----------HVH21   --------->PCF5<---------At4g35610   <----------DOF2 ----At4g35610      --------->DAG2         <-----------HVH21         --------->ARR14(2)  <---------ARR11(3) --->At4g35610     ---------->DOF2     --------->MYB52(1) <---------CCA1(2)   ------>ZmHOX2a(1)   agtcccggagtcagcaacacaaaaagcgtcaccgcgacaaaaaccggtccccaatcaggcatctctcgatcgatccactcctctttctaggtatcttaag  9975500                                                                                       <----------DOF2                             --------->ALFIN1                                     <----------DOF2                --------->YAB1           <-----------TBP                     <---------ANAC58               <---------ATHB12        <---------AHL20(2)                    <---------ANAC58             --------->WOX13(1)<---------ANAC46                          --------->ARR14(2)           ------------>CBF<---------TGA1a                               <------------CBF         >>>>>>>>>>WRKY26  --------->TGA1a      ----------->GT1          <---------ARR14(2)<---------TOE2(3)  --------->CCA1(2)   --------->ZAT18<-----------TBP                    --------->ATHB12   <---------TOE1(3)   agggatatagttgatcaatgaaaatgcacaagtgtgtgtatatatatgtagggaaatttgtagtggagaatagaagattgggttcttttctttaagggaa  9975600                                                                            <---------TOE2(3)                                                                       <------ZmHOX2a(1)                                                                      --------->ICU4                    <<<<<<<<<<AtTINY2                     ----------->GT1   <---------TOE1(3)                    --------->ETT(1)            <------ZmHOX2a(1)     ----------->GT1           <---------MYB46(3)                  <----------ID1  <---------ANAC46         <---------MYB52(1)                 ---------->DOF2    <---------bZIP60(2)      ---------->DOF2        <------------CBF                   <------ZmHOX2a(1)----------->HVH21----------->GT1      ---       --------->ATHB12            <----------DOF2      <------------CBF   ---------->DOF2        ---   tagagtaatccattggttaatgtcggaagaaagaatgctttgggaggaaaggacaaagaattgtgacatggaaggattaaagttataagaaaaagaagag  9975700                                                                  <---------ANAC58                                                                  <---------ANAC58                                                             --------->ARR14(2)                                                             <------------CBF                                                       <---------TGA1a                                                       --------->O2                                                       =======================bZIP_DOF                                      <------------CBF ==============================================                               --------->AHL20(2)      ===============================bZIP_DOF                       --------->ARR14(2)           ----------->HVH21                       <---------ARR14(2)          <-----------HVH21      --------->WOX13(1)     --------->TOE2(3)    <---------bZIP60(1)     ------>ZmHOX2a(2)<------ZmHOX2a(1)           <---------TGA2(1)     ========================HOX2a_HOX2a          --------->bZIP60(1) <---------YAB1 <---------ANAC58     --------->ATHB12  --------->TGA1a     ---------->DOF2 ------>ICU4    <---------ANAC46    <---------YAB1--------->TGA2(1)      <------ZmHOX2a(2)          < ------>GLK1(2) <---------ANAC58    <---------AHL20(2) <---------O2<----------DOF2          ---------   attatgatccatcaagttgtgtgaggattcacattaatttcattggaatgtgatgtcacatgggattggctttggatcaaaggaaacaaatatacaaagt  9975800                                            ==============================================MADS_MADS                                   -------->ATHB1                                   --------->ATHB51                                   <---------AHL20(2)                     ------>ZmHOX2a(1)            --------->ATHB12       <--------HAHB4                         --------------->AGL15    <-------TEIL                   --------->AHL20(2)                     <---------------AGL15 <------MYB46(1)                  <---------ATHB51                       ----------------->AGL2 <---------DEAR3(2)               --------->ICU4 <---------YAB1          <-----------------AGL3 <------MYB83          <---------DAG2       --------------->AGL15        <-----------------AGL2 ==bZIP_DOF<---------AHL20(2) ------>MYB46(1)<----------DOF2             <-----------------AGL1    <- ---------DREB2C(2)    <----------DOF2  <-----------GT1       <-----------GT1             <----------DOF2 ->DOF2    <---------YAB1     ------>MYB83  <---------------AGL15        <-----------------AG      --   agtcggtccattttttattggtttactttaccaacaattatttaagcctttatgagaaaaatataaacaatatttcctctatttgggaattactttggca  9975900                                                                                        <---------WRKY18(1)                                                             ----------->GT1         --------->ANAC55(2)                                                            <---------TOE1(3)        <---------ANAC58                                                            <---------TOE2(3)        XXXXXXXXXXXXXXXX                                                  ------>ZmHOX2a(2)                  <---------ANAC55(2)  ---------->DOF2              --------->ZAT14   <------ZmHOX2a(2)                   <---------ANAC58 ---------DOF2             --------->ZAT6       --------->ARR14(2)             <---------YAB1   ----- ------->TOE2(3)      <----------DOF2           <---------ARR14(2)       --------->REM1(1)      -----   tctttaaagctaaaatgaataagcctttaccagtagacactcttatactggatccaagtttgaaggtaaaatgctacatttctgattacttgaccatcaa  9976000  Previous    Next  AGI:  At3g27030.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G40970.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81100.1) Range:  from: 9973745    to: 9975462    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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