Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           --------->AHL20(2)                        --------->ARR11(3)                      ---------->DOF2                        <---------ARR11(3)          <---------ZAT14          --------->ANAC58                          --------->ZAT14          --------->ANAC58                        --------->ZAT18 ------->AHL20(2)       <---------AHL20(1)        --------->ZAT14                         <---------MYB52(1) ------->YAB1---------->DOF2                      <---------ZAT14        --------->WOX13(1)      ---- -------ATHB12          --------->AHL20(1) --------->YAB1    --------->TOE2(3) <------ZmHOX2a(1) ---- ---->WOX13(1)         --------->YAB1   ----------->GT1 --------->WRKY18(1)  --------->MYB59<--------   atgaaattgtcgaagcaaagaacaaaaatatttagagaagactagtaataagagcacagtcaaacttaaaggaatcaattaggaaattttcagttactgt  9948900                                                                              --------->AtMYB61     -       --------->ARR11(3)                                                     --------->TOE2(3)  ----       <---------ARR11(3)                          --------->AHL20(2)       -------->P ------>ZmHOX2a(1)  <---------ATHB12                             >>>>>>>>>>GT-3b          --------->ANAC58         <--- ------------->AGL2                       ---------->DOF2               --------->ANAC46      <------ ------------->AGL1  <----------ID1   --------->ANAC58                  --------->ANAC58     <------- -At5g28300      ---------->DOF2      --------->ANAC58         <---------GLK1(1)  <---------At4g35610   ccaaatcaagaacttggaccaaaggaacaagaagaacaataagcaaaagaaaaataaaaacttggaactcatctaagcaacctaagctcctaaaccgtca  9949000                         -------->P               --------->ANAC46              ------->GAMYB  --------->LBD16           ----------->RAV1(1)     <-----------GT1<---------ARR11(3) --------->DAG2--------->ANAC58 --------->DOF2--------->ANAC58          --------->ANAC58 ----->At4g35610    <-----------ARR10    --------->ANAC46                                          -- ------At4g35610   <---------CCA1(2)     --------->ANAC58          <------MYB83                  ---- ---MYB52(1)--------->ZAT14 --------->ANAC46                       <------MYB46(1)               ---- ----HVH21--------->ANAC46 <---------LBD16                        <---------TOE1(2)          --------   gataaagttaccacaacacacaaatcttacccggactagagacactcaatccaaatgtccaagtttgctaggttttgagtcttgggaatgaagagaatca  9949100                         --------->At5g28300                        ----------->GT1                 --------------->AGL15      <------ZmHOX2a(1)----------->GT1                          --------->ZAT2  --------->TOE1(2) ---------->DOF2       ---------->DOF2       --------->At4g35610 -------->DOF2   <---------------AGL15 --------->TOE2(3)        <---------At4g35610 ----->ANAC58   --------->TOE1(3)   ------>MYB46(1)  ----------->GT1 ----->ANAC58   --------->TOE2(3)   ------>MYB83  <---------ZAT2<---------ZAT2               -------- ->GLK1(2)  --------->GLK1(1)     <---------MYB59 <---------At4g35610      <---------At4g35610     --   agaaagtaggagagaaacccttaaaagggtaaatgacctaatctcaaagtgaagctggtaaaatccagctaagagattgctgctatgtgattctatcaaa  9949200                                       <---------ARR14(2)                              ----------->HVH21                             <----------DOF2                             <-----------HVH21                            --------->bZIP60(2)                           ------>NtERF2              ----------->GT1                           --------->LBD16     <---------ANAC46                         <---------LBD16    ----------->HVH21             --------->ANAC58                      <---------GLK1(1)--------->ARR14(2)            <----------ID1                    <------ZmHOX2a(1)  --------->GLK1(1)           ---------->DOF2      --------->DAG2                   --------->ICU4     --------->GLK1(1)       ----------->GT1*TSS      ---------->DOF2               <-----------TGA1       <---------GLK1(1)<------ZmHOX2a(1)  ----------->GT1 ->YAB1    <----------DOF2<---------ANAC46  ----------->TGA1 <---------TOE2(3) <------------CBF    <- ------->GLK1(2)   <---------YAB1  --------->ANAC46  <---------TOE2(3)    --------->ANAC58         --   gtttctgatatgtctttcgtcaggattgccgcgttacagggaatccctgacgagtaaggaaataagataaaaagacaagaaaattgtggaaaagtatgtt  9949300                           <------NtERF2                          <---------RAP2.3(1)                         <---------DREB2C(2)                         --------->ETT(1)                         <---------RAP2.3(3)                         <---------DEAR4(1)                         <---------DEAR3(1)                        --------->RAP2.6(3)                          <----------DOF2            --------->ANAC58                               ----------->RAV1(1) <-----------ARR10            --------->ANAC58                            --------->ANAC58       --------->GLK1(2)          ---------->DOF2<---------At1g77200            --------->ANAC58       --------->ARR14(2) ---------DOF2 ---------->DOF2                   ---------->DOF2 <---------ATHB12          --------->AtLEC2 ------------->AGL15   <-----------HVH21     <----------DOF2 --------->MYB46(3)<---------ARR14(2)   tctttattagtcaaaagcaaagccttgtcggcgttttgaccagaagactttaaaagacgagcaacaaatcactttggtccaaatctgacttccatgtaaa  9949400                                           ----------->RAV1(1)                                          <---------------AGL15                                          --------------->AGL15                                     <---------HSFB2a(1)                                     <---------HSFC1(2)                                     --------->HSFB2a(1)                                     --------->HSFC1(2)                                    --------->ARR11(3)                                    --------->ARR14(2)                             --------->YAB1                           --------->ARR11(3)    --------->YAB1                   <---------YAB1              ----------->GT1       --------->GLK1(2)                      <---------ARR11(3)              --------->ANAC58      <---------ARR14(2) --------->ARR11(3)  --------->ARR11(3)              --------->ANAC58     <---------GLK1(2)   <---------ARR11(3) <------ZmHOX2a(1)         <------ZmHOX2a(1) --------->GLK1(2)     ----------->GT1        <---------TOE2(3) ---------->DOF2           <---------ARR11(3) --------->YAB1          ---------->DOF2   tttcaaagagaggaacaagaaaatttgaaaatctatagaatcttccaacaatagtaaaatctcagagcaaaacaaaggatttttatgatatgtttacaga  9949500                                                                        ---------->DOF2                                                                      --------->YAB1                                                                     <---------YAB1                                                                   <---------ICU4                                                                   --------->YAB1                --------->ANAC58                                  --------->ICU4                --------->ANAC58     --------->ANAC46           <---------ICU4     --------->TOE2(2)              ---------->DOF2            ------>ZmHOX2a(1)     --------->TOE1(2)     ---------->DOF2                     <---------YAB1     --------->TOE2(3)  --------->YAB1                  --------->AHL20(2)   gttgaaaccttggattagacgcacaattagaaagcatacaaagcacattttaagaacataaaatcctaattatcaaaagcccattgaaactatatttaac  9949600                            <-----------GT1                        <----------DOF2                        <---------DAG2                    --------->ZAT18                               <---------ANAC58                    --------->ZAT14                               <---------ANAC46                    <---------ZAT14                      --------->ZAT6    ----------->GT1--------->At4g35610                    <---------ZAT18                    <-----------GT1   <-----------RAV1(2)                --------->DAG2              --------->SPL7        <---------ANAC58        <---------At4g35610               ---------->DOF2        ------->TEIL  --------->ARR14(2)----------->HVH21 <-----------RAV1(2)   aaaaaaaaaccaaaaaaaaaagtgaactttttgctatatgaacccctacgaacagatttacactactggcgagtgacaggtgtaataggcacagatgagt  9949700                                                                                              -------                                                              <-------GAMYB            --------->ANAC58                                                             --------->MYB111(2)       --------->ANAC58                                                             <---------MYB46(3)   <---------TOE1(2)                                                            <--------P   <---------ANAC58    <------ZmHOX2a(1)                                --------->HSFB2a(2)      <---------AtMYB61       <-----------RAV1(2)                       --------->LBD16               <---------At4g35610 <---------ANAC58  --------->ANAC58         <-----------GT1        <---------HSFB2a(2)  --------->At4g35610 <---------ANAC46  --------->ANAC58   taatgccatagaaaccatcttgtccctgaaacttctggtatgaattctccgatggagcagaggttgttgaaagttgagtgagcccaggtacccaaggacc  9949800  Previous    Next  AGI:  At3g26980.1    Description:  MUB4 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 4 PRECURSOR). Identical to Membrane-anchored ubiquitin-fold protein 4 precursor (MUB4) [Arabidopsis Thaliana] (GB:Q9LSD8); similar to ATGP4 (Arabidopsis thaliana geranylgeranylated protein) [Arabidopsis thaliana] (TAIR:AT4G24990.1); similar to unknown [Populus trichocarpa] (GB:ABK94581.1); contains InterPro domain Membrane-anchored ubiquitin-fold protein, HCG-1 (InterPro:IPR017000); contains InterPro domain Ubiquitin; (InterPro:IPR000626) Range:  from: 9947403    to: 9949277    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g26990.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G10060.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49056.1); contains InterPro domain ENTH/VHS (InterPro:IPR008942); contains InterPro domain Protein of unknown function DUF618 (InterPro:IPR006903); contains InterPro domain Regulation of nuclear pre-mRNA protein (InterPro:IPR006569) Range:  from: 9949460    to: 9953278    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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