Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  <----                                                       <---------YAB1                           -----                 --------->CCA1(2)                  <---------ARR14(2)                          <----                --------->ARR14(2)                <---------MYB46(3)                            -----     --------->GLK1(2)         --------->ZAT14 <------MYB46(1)                                  ----- -------->At4g35610          --------->REM1(2) <------MYB83                                     <---- ---------At4g35610       --------------------->WRI1--------->ARR14(2)                          ----- --->ANAC46     --------->ARR11(1)             <---------MYB46(3)                              ------ --->bZIP60(2)  <---------ARR14(2)             --------->MYB52(2)                     <---------MYB46(3) -ETT(2)        --------->ARR11(3)            <---------AtMYB61                     <-------GAMYB -ZAT18         <---------ARR11(3)           <---------MYB52(1)                    <---------MYB46(3) >ETT(2)      ----------->ARR10<---------ZAT14<---------DEAR3(1)                <-----------RAV1(1)   tcagcacaatctagagaagatatggctaccttgtacagtccaaactcgttggtggttctgtttgcagagaatgttatagtctctgtcgttgttgacgaag  9946400                                                                                         <----------DOF2                                                                                        ------>ZmHOX2a(2)                                                                                       <------ZmHOX2a(2)                                ----------->RAV1(2)                                    <---------RVE1(1)                                <---------TGA1a                                       --------->ARR11(3) <----------DOF2                --------->TGA1a                                       <---------ARR11(3) =========================================bZIP_DOF                              ---------->DOF2 -----HSFC1(2)                  ==================bZIP_DOF                     --------->AHL20(2) ---->HSFC1(2)                --------->ANAC46                                 <---------AHL20(2) -----At4g35610             <---------ALFIN1                               --------->AHL20(1) ---->HSFB2a(1)       <---------ALFIN1         --------->TOE1(3)           --------->AHL20(2) ---->ZAT2           ------>ZmHOX2a(1)         --------->TOE2(3)           <---------AHL20(2) -----ZAT2       --------->ARR14(2)    ---------->DOF2               --------->ANAC58 --------->AGP1 ---->At4g35610  <---------ARR14(2)  --------->REM1(2)               --------->ANAC58<---------GLK1(1) ->TEIL   --------->At4g35610 <---------ALFIN1----------->GT1      <---------AtLEC2  --------->GLK1(1)   ctgctttgaatcggcagactatcctcacttccacacctgtgtaaagaaacgttaagaaacagagtttttgcagggaattaattaaagagatctttttgtt  9946500                                                                                       <-------------                                                                                    <---------GLK1(1)                                                                            --------->YAB1  <--------                     --------->MYB52(1)                                    <---------YAB1  ------->TEIL          --------->LBD16                                               <---------------AGL15          ----------->HVH21                                    --------->ZAT14 --------->YAB1        <---------LBD16                          <---------At4g35610    --------------->AGL15       <       --------->MYB52(1)           --------->GLK1(2)        --------->At5g28300    --------->GLK1(1)   ctgagttactaccggacatgaagtaactgtgtttagagaaactgtttttggagcaaacatcgcagtaaacaaaacccattatagtgatttctgcatctgg  9946600       <---------ANAC58                                                                     ---------       <---------ANAC58                                                                 <-----------TGA1 ----AGL2      ------->TEIL                                                 --------------------->WRI1 -At4g35610 <---------YAB1 --------->CCA1(2)                             <-----------HVH21  <-------- ---------AtMYB61  <----------DOF2       --------->At4g35610  ---------->DOF2    --------->GLK1(1)   ttttggtttgggtgatgaatgctttgaagatagagagtttacgagcagaaattgcagaagtataaaaagaaacattgtcagtgatttcttcgtcatctta  9946700                                                  --------->ARR14(2)                  <------MYB46(1)                 --------->GLK1(2)                  <------MYB83                    <---------ARR14(2)            --------->ZAT18 >At4g35610       ----------->GT1       --------->ICU4                        --------->ANAC46 -At4g35610      --------->MYB59  <---------TOE2(3)             ---------->DOF2 <---------ZAT18   agcacaacaagtttcaagtttggtttatttgatatttatgtaagaattggagaatatgtgtgtgaagaaagaagaaatatagggaactagttttcagaca  9946800                                                                                                -----                                                                                                <----                                                                                                <----                                      <-----------TBP                                        --------                                   ----------------->AGL3                                 --------->MYB52(1)                                <----------DOF2                                        --------->ANAC58                            --------->ARR14(2)               <-------MYC3              --------->ANAC46                            <---------ARR14(2)               ------->MYC3              --------->ANAC55(2)                          <---------MYB46(3)                <---------TGA1a            <---------ANAC55(2)                       <---------ANAC46          ----------->GT1  <----------DOF2      --------->ANAC58                  <---------ARR11(3)<---------------AGL15   --------->O2            <---------ARR14(2)                  --------->ARR11(3)--------------->AGL15   <---------O2            --------->ARR14(2)                *TSS  <-------TEIL <-----------------AGL2   --------->TGA1a    <---------ANAC58------              ---------->DOF2   ======================================bZIP_DOF <---------ANAC58<-----     <XXXXXXXXXXXXXXXXXXXXMIR2938  <-----------------AGL3   =================bZIP_DOF--------->CCA1(2)   agaatagaactctcttgaaagagcttcgtggttcctttctatatatagagagagttatacaaacgtgtcttttaaaaataggcttggatacgaaacggat  9946900    <---------YAB1  <-----------GT1                                      <-----------GT1 ---->GLK1(1)                                      --------->AHL20(2) -----RVE1(1)                                    ----------->GT1 -----CCA1(1)              <-----------GT1      <---------TOE2(3)                               <---- --->GT1                <---------ICU4         ---------->DOF2                  <---------------AtSPL8 --->ARR14(2)        --------->YAB1    --------->ARR14(2)              --------->DAG2       --------- ----ARR14(2)       <---------YAB1     <---------ARR14(2)             ---------->DOF2     ---------->DOF2   atttttactattcattttgtttttcatagttacaatattcgaatcggattaaagtaaataccatatcgaagagaaagtgatgggagtacaaagaaaggtg  9947000                                                                      <---------ZAT14                                                                 <---------ARR11(3)               <---------YAB1                 ---------->DOF2  --------->ANAC58                    <-            <---------YAB1          <------ZmHOX2a(1)     --------->ANAC58                    -------    <---------ANAC46              ------------------------>ANAC81--------->ARR11(3)          <------- ---TEIL --------->ICU4        <------ZmHOX2a(1)          --------->ANAC58                   <------- >DAG2   <---------YAB1   <-----------RAV1(2)<---------AHL20(2)--------->ANAC58       ---------->DOF2   catttggagtgaagattataaatgagagccagaggagaggaatagaattaaaggcgaaacaagacaagatagtggagagacactaagtgaaagtgaaggt  9947100                                            <------ZmHOX2a(1)                                            ======================HOX2a_HOX2a                                      ----------->HVH21                                    --------->At4g35610                                    <------MYB83                                    <---------ANAC55(2)                                    <------MYB46(1)                                    <---------ANAC46                                   --------->MYB111(1)                                             --                                   --------->MYB46(2)      ------>ZmHOX2a(2)                      ---                                   --------->MYB111(2)    <------ZmHOX2a(2)                       ---                                   --------->MYB59<---------AHL20(2)                            <---- --------YAB1                    <<<<<<<<<MYB98   --------->ATHB12                            ------- ---->GT1                  --------->YAB1   =====================HOX2a_HOX2a              ------->TEIL --TOE1(3)              ----------->GT1 ---------->DOF2  <---------ARR11(3)              <---------CCA1(2) --TOE2(3)      --------->ALFIN1 <---------MYB52(1)      --------->ARR11(3) <----------DOF2   -------   tataaatgagagaattaagtgggagacagtgataagttaggtgaaaggacatttattgagatctcatgctctctgtttcttttggaggtttgtatctacc  9947200     --------->ANAC46                                                                        ------>MYB46(1) ------->REM1(1)                     <---------YAB1                                          ------>MYB83 --->MYB46(1)        <---------HSFB2a(2)       --------------->AtSPL8                        -------- --->MYB83           --------->HSFB2a(2) ---------->DOF2                           <---------ATHB12 -----MYB59      <----------DOF2  --------->ICU4              >>>>>>>>>MYB98      --------->ANAC58 ->P--------->LBD16<---------ANAC46--------->YAB1         ----------->GT1         --------->ANAC58 >TEIL    --------->ATHB12 ----------->GT1    --------->CCA1(2)      ---------->DOF2       <---------MYB59   tacatccccaaaacattggctttgtggaagtggaaaatgatgagaaaggtatggaccatatagtaacatatcaaagtgtttgccactcaagaaccaaact  9947300  Previous    Next  AGI:  At3g26960.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G41050.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49052.1) Range:  from: 9945905    to: 9946816    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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