Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      <------ZmHOX2a(2)                                                    ====================================HOX2a_HOX2a                                                   <---------ARR11(3)                                                   --------->ARR11(3)                                               ---------->DOF2                                  <----                                             --------->YAB1                                     <----                                             --------->AHL20(2)                     <------ZmHOX2a(1)         <---------ICU4                      <---------AHL20(2)                     =================      ---------->DOF2                     --------->YAB1                         ==================== ---------->GT1                          <---------YAB1                          <------ZmHOX2a(1) -------ANAC46                           --------->ICU4               --------->ARR14(2)        <---- ---->ATHB12                           --------->YAB1 ---------->DOF2 <---------ARR14(2)        ----- ----ATHB12                           <---------AHL20(2)             <------ZmHOX2a(1)          <---- --ICU4<---------TOE2(3)          --------->AHL20(2)========================HOX2a_HOX2a         <----   actggtattaaagatgactaatctcaagattaatctataaataataataaaaagatcaaagggaagtgagaggaaccagaagaggaggatgtctggttac  9940100     ------>ZmHOX2a(2)    <---------GLK1(1)    --------->GLK1(1)   <---------AGP1   ------->TEIL   <---------ARR11(3)                                            -------->P   --------->ARR11(3)                                         --------->MYB46(3) -----ANAC58                                                  <---------MYB52(2) -----ANAC58                                                  <---------MYB111(1) ===========HOX2a_HOX2a                                       <---------MYB46(2) ===========HOX2a_HOX2a                                  --------->ANAC58 -----ANAC55(2)               <-------TEIL               --------->ANAC58                  --------->ANAC58 ---->ANAC55(2)            <---------At4g35610           --------->ANAC46           --------->WOX13(1) -----ANAC46               --------->At4g35610 --------->ANAC58 --------->MYB52(1)<---------ATHB12  - -----ANAC55(1)       <----------DOF2          --------->ANAC58------->GAMYB<----------DOF2--------->ANAC58   gtatggatctcttatgagatttgtctttgagcttcgttttccgactgggacgaaaacacaagcaactaaccatgttttcttttaatcaatctcaaggaaa  9940200                     --------->ANAC58                     --------->ANAC58                --------->bZIP60(1)              <------MYB46(1)              <------MYB83             <---------AtMYB61          <---------MYB46(3)        --------->CCA1(2)          <-----------RAV1(1)      <---------ARR11(3)                                               <       <-----------RAV1(1)     ---------->DOF2                                                     <-   <----------DOF2  --------->WOX13(1)           <-------TEIL       <---------YAB1            ------- -------->GLK1(2)<-----------HVH21 --------->ARR11(3)         ----------->GT1       --------->CCA1(2)   ataatctttttgttgttggtgtcactcaataaacaaagatatacacacacatacactctctatatggtttatcaatagggctcaagagatgatcacacac  9940300                                                                                      --------->GLK1(2)                                                                              ----------->RAV1(1)                                                                            <------ZmHOX2a(2)         <---------MYB52(2) ---------->DOF2                            --------->ANAC46   ---------->DOF2       --------->YAB1                         --------->ANAC46      --------->CCA1(2) ------ZmHOX2a(1)       <---------YAB1                          --------->ANAC58     --------->ARR11(1) ---------ID1<------------MYB.PH3(1)                            --------->ANAC58 ------->GAMYB -->ANAC46 --------->MYB52(1)           <----------DOF2   ------->TEIL--------->TOE1(2)<-------TEIL   gaggacaaagaactaacggttttgttatcaaaaagatgaaaactttgaaggaatcagacgaaccccaagaaacacacgatcaacagagattcgagttttg  9940400                                                              <------ZmHOX2a(1)                                                          <------ZmHOX2a(1)                                                        --------->ANAC58                                                        --------->ANAC58                                                 <---------ANAC46         --------->AHL20(2)                                                 <---------At4g35610 <---------TOE2(3)                    --------->ATHB12             ----------->GT1 --------->ARR11(3)      ----------->GT1      <-----------GT1                           <-----------------------TaNAC69(2)       <---------ANAC46 --------->ICU4 --------->DAG2     --------->ANAC46     <---------TOE2(3) <---------AHL20(2)        <   ggaataattttccatcaaaaattgattacaaaaaaacacgagaaatttgtgaggtgataaggaaggagatttagattaaaatcgagagttttcgtaaaat  9940500                                                                                               ------                                                                                               <-----                                                                                          -----------                                                                                          <----------                                                                                     <---------ARR11(3)                     <-------GAMYB                  --------->ANAC58                 <---------AHL20(1)                    <------MYB83                    --------->ANAC55(1)              --------->AHL20(1)                    <------MYB46(1)                 --------->bZIP60(2)             <-----------TBP                   <---------AtMYB61                --------->ANAC46               <-----------------AGL3                 --------->CCA1(2)                  --------->ANAC55(2)            ==================                 --------->ARR14(1)                 --------->ANAC58            --------->ZAT18------                <---------ARR14(2)             --------->ANAC58              <---------ANAC58  ------                --------->ARR11(1)             --------->ANAC58              <---------ANAC58 -------      *TSS    ----------->ARR10              ---------->DOF2                <---------DEAR3(1)<------     <---------ARR14(2)                 <------ZmHOX2a(1)      ---------->DOF2  ------------>CBF <--- ---------LBD16 --------->ARR11(3)<---------YAB1    <---------ANAC55(2)  --------->ALFIN1 <----------   tttgggggatttagataagatttggttgaaggggttttgataggaaggaaagacacgtaatcaacaaaagagagcatgggggtgcaatatatatggtacg  9940600    ------------>CBF --->ANAC58 ----ANAC55(2)                                  <---------------AGL15 ---->AtSPL8           --------->AHL20(2)       --------------->AGL15 -----AtSPL3====================================================MADS_MADS ===========================MADS_MADS          ----------------->AGL1 --->ANAC55(2)      ----------->GT1       <---------YAB1 --->ANAC58<---------ANAC58            --------->AHL20(2)                <---------YAB1 -->SPL7   <---------ANAC46    <---------AHL20(2)      ----------->GT1 --------->YAB1 -TEIL     <---------ANAC58    --------->AHL20(2)    <---------TOE2(3) --------->TOE2(3) ------MYB52(1)     XXXXXXXXXXXXXXXXXXXX>MIR1886.2   <---------ANAC46 ----------->GT1             <-- -----AtSPL8--------------->AGL15      <---------AHL20(2)   --------->ICU4           --------->YAB1   ttactcaccaattgcttctatgagataaaatcatttattgttttattatgccattgagggtaataatctacaatgttaattgttttatagtaagtttctc  9940700                 <---------AHL20(2)                                                        <---------ANAC55(2)                 <---------YAB1     <---------ARR14(2)                                     --------->ANAC55(2)        --------->LBD16       <-----------RAV1(1)                                       <---------MYB52(1)       <---------LBD16    <---------YAB1                                              --------->ANAC58       --------->LBD16 <---------YAB1                       <----------ID1         ------>ZmHOX2a(1)  <---------CCA1(2)  --------->YAB1 <---------GLK1(2) --------->ICU4             <---------ICU4 --------DOF2  --------->YAB1<---------TOE2(3)<---------AHL20(2)       ----------->GT1--------->ANAC58   ctttatatccctggaatttataattgtgataaatgttggattctgaatttaaactaatttttaagacaaaaattagaaaataatcctcacgttaagtatt  9940800                                                                                    <---------AHL20(2)                                                                                    --------->AHL20(1)                                                                                    --------->AHL20(2)                                                                                   --------->AHL20(2)                                                                            <----------ID1                                                                          --------->MYB52(1)                <---------AHL20(1)                                     --------->ANAC58                --------->AHL20(2)                                     --------->ANAC55(1)                --------->AHL20(1)                                     --------->ANAC58            <---------ZAT6           <---------MYB46(3)                --------->ANAC55(2)          --------->YAB1         <---------YAB1                        <---------ANAC55(2)   <-------      <---------YAB1     --------->YAB1             ---------->DOF2    --------->ANAC46   <---------YAB1   tctaaattctaatagtgatatattagatgataactatgtttgttatgcattcaaaaaaggcccaaaactatagacgtaacgacaaaaaaattatcaacgt  9940900                                <------MYB83                                <------MYB46(1)                                <---------MYB46(3)                               <---------AtMYB61                              <--------P                             <---------ANAC58                             <---------ANAC58                             <-------GAMYB                            --------->ATHB12                            <------MYB83                            <------MYB46(1)       --------->ICU4                            <---------MYB46(3)  --------->AHL20(2)                            --------->MYB55(2) --------->AHL20(2)                            --------->MYB52(2) <---------AHL20(2)       --------->ATHB12    <---------AtMYB61  <---------AHL20(1)         --------->LBD16      <-------TEIL      <-----------RAV1(1)   --------->AHL20(2)     --------->ARR14(2) --TOE2(3)         <---------AHL20(2)<---------AtMYB61         ----------->GT1              <--------   ttttgaaattcattgaagaattttttttgttggttggttttggtgcaaaataatttttaagtgtattgcaaaaaccgcagagaataacaaaattttgata  9941000  Previous    Next  AGI:  At3g26940.1    Description:  CDG1 (CONSTITUTIVE DIFFERENTIAL GROWTH 1); kinase. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G02800.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49058.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 9937819    to: 9940506    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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