Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100    ---------->DOF2 ------>ZmHOX2a(1) ---GLK1(2)                                                              --------->AHL20(2) -->ARR14(2)                                                   ---------->DOF2 ---ARR14(2)  --------->DAG2                           <---------At4g35610                       <--- -->ARR10    ---------->DOF2                           --------->At4g35610<---------AHL20(2)     ----   ctcctaaagacttaataaagttccaattttgaactaggttgaaattgaaaacatagcagctaatctaaagtcccatttaatagacttagcaaaaactaaa  9936300                                                                                                   --                                                                                        <------MYB83                                                                                        ----------->GT1                                                                                        <------MYB46(1)                                                                                       --------->MYB59                                                                                 --------------->AGL15                                                                                 <---------------AGL15                                                                                ----------------->AG                                                                                <-----------------AG                                                                                ----------------->AGL1                                                   <----------ID1               <-----------------AGL1                                               ---------->DOF2                  ----------------->AGL3                                          ------------------------>ANAC81       <-----------------AGL2                                         ------------------------>ANAC81        =====================                                        <----------ID1                       <----------DOF2    ----- ------AHL20(2)                       <---------------AtSPL8                <---------DAG2      ----- ----->AHL20(2)                   ---------->DOF2  ----------->GT1        ------>NtERF2--------->MYB46(2)   aaaatgggaaggaagagtaatgaagcatctatagctcaaagaagaacaaaaaagagaaaaaaaaaactcacattgctgcctttccaagtttggtaaaccc  9936400                            <----------CDC5                           <---------At4g35610                --------->LBD16               <---------HSFB2a(2)     <------NtERF2               --------->HSFB2a(2) <---------ATERF1(1)            --------->ARR14(2)    <---------DEAR3(1)            <---------ARR14(2)    --------->ALFIN1      --------->ATHB12     --------->At4g35610     <---------YAB1       ------>ZmHOX2a(2)    <<<<<<<<<<<<<<<<<LFY <------ZmHOX2a(2)   <-----------GT1 --------->GLK1(2)<------NtERF2                        <<<<<<<<<TBF1 -------->DOF2------>ZmHOX2a(2)   <---------ANAC46                    <<<<<<<<<TBF1 ===============================MADS_MADS                         <---------ARR11(3) ---->TOE1(3) ----------------->AGL3--------->ATERF1(1)     --------->TOE1(3) ---->TOE2(3)<------ZmHOX2a(2)   <---------LBD16<-------TEIL--------->TOE2(3)   ttaaatcaccattggatccagaatcagatcgctgaggcggaggcactacatacatctctcaacctcaatttcttcttcttctacttcaatctctctctct  9936500         --------->ATERF1(1)         <------NtERF2         --------->TGA2(2)        ------>NtERF2        <-----------TGA1        <-----------HVH21        <---------ATERF1(1)       --------->bZIP60(1)       --------->bZIP60(2)       <---------bZIP60(1)      --------->RAP2.3(1)      <------NtERF2     <---------ATERF1(1)     <---------RAP2.3(1)     ------>NtERF2    <---------DEAR3(1)                                                            <------ZmHOX2a(1)   --------->RAP2.6(3)                                                           ----------->GT1  --- --------->ANAC46                                                         ------>NtERF2           --- --------->O2                                                             --------->LBD16        <--- <---------TGA1a         <----------DOF2                                 --------->ANAC46    <------- ===================================bZIP_DOF                   --------->MYB111(1)--------->YAB1<---- ----------->HVH21--------->At4g35610                         <--------P <---------ETT(1)   --------- <---------O2     <---------At4g35610              ---------->DOF2      <---------LBD16     <-------- --------->TGA1a  --------->ZAT2     <---------MYB52(1)     ----------->GT1   ---------->DOF2--------   ctcacgacggcgtcaccaagagctgagctttaaaaacccgtttcgaagatgaagaaagagaagggtaagtagtctccggcaaaaggataattcagatttc  9936600        --------->At4g35610        <---------At4g35610 --->NtERF2------>NtERF2 ------>LBD16     <---------ZAT18 ------LBD16      --------->ZAT18 --GLK1(1)--------->DEAR3(1)         ---------->DOF2 -----LBD16<---------RAP2.6(3)  <------NtERF2               <---------ANAC46                        < >ARR14(2)<---------ETT(1) --------->ANAC58                 <---------ANAC58            <---------ALFIN1 -GLK1(2) --------->RAP2.6(2)   --------->At4g35610  <------------------------ANAC81   --------->LBD16 ->GLK1(1)<----------ID1   --------->ANAC58 ----------->GT1 <---------ANAC58          --------->ANAC46   cggcgaagtaagccgacaagggcacgagtaagccagcgaaaaagaagggtttttttttttttgtgtgttagcctctcttctcttcttcccccaatttcaa  9936700  <------MYB46(1) <----------DOF2                                    ---------->DOF2  <---------DEAR3(2)                                             ---------->DOF2         <---------MYB52(1)  <------MYB83 <---------ALFIN1      --------->HSFB2a(2)   <-----------GT1         ----------->HVH21 <---------MYB46(3)                 *TSS            --------->AHL20(2)         <---------ANAC46 ---------ANAC46  <---------DAG2---------->ID1      <---------AHL20(2)    --------->GLK1(2) <--------   tggtgggttctcttcccccactttttttttttttgtcttctcaaacaaaaacattttaatataaccaaaaagaaagaaactgtgtgtgaccgtcgttttt  9936800                              --------->O2                              <---------ANAC55(1)                              <---------O2                              --------->ANAC55(2)                              <---------TGA1a                              <---------bZIP60(2)                              --------->TGA1a                              <---------ANAC55(2)                              ===============================================MYC_MYB                              <---------ANAC58                              <---------ANAC58                              ===========================================MYC_MYB                              =================bZIP_DOF               --------->WRKY18(1)                              <---------ANAC46                       --------->At5g28300                            <---------TGA2(2)                     --------->LBD16                           ----------->TGA1                     --------->MYB46(3)                           ----------->HVH21                    <------------AtMYB77                         --------->At4g35610                   <---------At5g28300                ---                         <---------At4g35610   <---------MYB46(3)------->GAMYB                    <--       <----------DOF2   --------->ZAT2    --------->ATHB12   --------->ARR14(2)             <-------       =================================bZIP_DOF     ---------->ID1  <-----------HVH21       --------    <-----------GT1     --------->GLK1(2) <---------AHL20(2)  <---------ARR14(2)           --------->YAB1 -MYB52(1)        >>>>>>>>>WRKY18   <----------DOF2 <-----------HVH21<--------ZAP1   --------->TOE2(3)   ttagtttatctttcttattttgacagaagctgacgtgtctttatttcattggtttgtcacttagtaaccgcggtcaaaaattttgtttcttaatagtgat  9936900                                                --------->ANAC58                       --------->DAG2           --------->ANAC46   --------->ICU4 <----------DOF2      --------->DAG2            --------->ANAC58   <---------YAB1               ----- ------>ARR11(3)     ---------->DOF2       <---------YAB1        --------->YAB1                 <---- -------ARR11(3)<------ZmHOX2a(1)        --------->YAB1         --------->ICU4                  <---- --YAB1 --------->ARR11(3)              <---------YAB1          <---------YAB1                  ----- ->ICU4<---------GLK1(1)          >>>>>>>>>>GT-3b  ----------->RAV1(1)<---------WOX13(1)       ------   tatcttttgaaatctcgaggagaaaaaggtcgaaagaaaaatatgatgacaggcaacatatgggttatgatgatggactcaaccttctctaaaacaaaaa  9937000                                =============================================bZIP_DOF                                <---------O2                                --------->TGA1a                                --------->O2                                <---------TGA1a                            --------->ANAC58                            --------->ANAC46  <----------DOF2           --------->ANAC58  ========================================bZIP_DOF ---->ARR11(3)   <---------ARR14(2)             <---------AHL20(2) -----AHL20(1)   --------->ARR14(2)             --------->AHL20(2)                            ------- -----ARR11(3)   --------->ARR11(3)    <---------MYB59                    <-------TEIL       -------- ---->AHL20(1)   --------->GLK1(2)--------->ALFIN1                <----------DOF2 --------->YAB1 --->YAB1        <---------ARR11(3)  <---------PCF2      <-------TEIL--------->AHL20(2)--------->ZAT6   tattcttttgagccttgaaaatctgaattcacacaagtgggcctaactatataaatatgttcattcaacttttaaatacatttttcataacacaaaaaag  9937100                                                                          --------->CCA1(2)                                                                         <---------ARR14(2)    --------->REM1(2)                                                    <---------ARR11(3)  <---------------AtSPL8                                                 --------->ARR14(2)  --------------->AtSPL8                                                 --------->ARR11(3) <---------ANAC58                                                     <--------P --------->ANAC55(2)                                                <------MYB83 <---------ANAC55(1)                     --------->HSFB2a(2)        <------MYB46(1) <---------ANAC58                   <---------MYB46(3)              ----------->GT1 <---------ANAC55(2)           ---------->DOF2                   <------ZmHOX2a(1) <---------ANAC46        <---------ICU4  <---------HSFB2a(2)   <---------TOE2(3)  --------->YAB1 -->DAG2                --------->ICU4 <---------REM1(1)      --------->YAB1----------->GT1      <--- -->DOF2           ----------->GT1 --------->ALFIN1          <---------ATHB12    <---------YAB1 -----   tttacgtgtacaacaattccgatgtaaaaatcacaaagtggttgtagaacgcttctggttccaataaggatggtagatatgttataatgctatctgacta  9937200  Previous    Next  AGI:  At3g26935.1    Description:  zinc finger (DHHC type) family protein. similar to zinc finger (DHHC type) family protein [Arabidopsis thaliana] (TAIR:AT5G41060.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49059.1); contains InterPro domain Zinc finger, DHHC-type; (InterPro:IPR001594) Range:  from: 9933837    to: 9936736    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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