Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     <---------CCA1(2)               <---------MYB52(1)             <---------MYB46(3)             <---------DEAR3(2) ------>ZmHOX2a(1)        ----------->GT1                        -----       <---------ANAC58        --------->TOE1(2) <---------TOE1(3)          <---------YAB1      <----    ----------------------->TaNAC69(2)         ----------->HVH21          ----------->GT1   <-------- --------AtMYB61   ---------->ID1            <----------DOF2     <---------ANAC55(2)        <-------- ->DOF2<---------ANAC58        --------->TOE2(2) <---------TOE2(3) --------->AHL20(2)  <----------DOF2   tttggtttgacttgtctgttcgtctctctcaatcctgtgattactctctttgacgttaagagttaatacttaaatactgtgattactctctttgacttgt  9926600 ----->ID1       --------->TOE2(3) -----CCA1(2)  --------->ARR11(3) -ANAC58       <---------ARR11(3) -ANAC58 <-----------GT1          <---------CCA1(2)                <---------GLK1(2)     --------->ANAC55(2)   ctcttcgtttttctcaataccttgaatattgtattcatctcttcttgacaatgtctcttagtattcatggattcttgttctatataagtttatgtattcc  9926700                                                      <---------ARR14(2)                                                      <---------MYB52(1)                                                      --------->ARR14(2)                                                  ------>NtERF2                                                  <---------ZAT2                                                  <---------At4g35610                              --                                                  --------->At4g35610                              <-                                                 --------->DEAR3(1)                           <------                                                --------->ERF1                                -------                                                <-----------RAV1(2)                           <------                                               --------->At4g35610                           ------->TEIL                                               --------->ABI4(1)                            <--------                     --------->TOE1(3)         --------->ZAT14                            --------->ANAC46                     --------->TOE2(3)         <---------At4g35610                      ---------->DOF2                   <---------TOE2(3)          --------->DEAR3(1) <---------MYB46(3)   ------>ZmHOX2a(1)                   <---------TOE1(3)          --------->ANAC46 <---------At4g35610   --------->TOE1(3)                  --------->MYB52(1)       <---------ALFIN1    --------->At4g35610   --------->TOE2(3)               --------->TOE1(3)          ------>ZmHOX2a(1) <---------At5g28300    ------>ZmHOX2a(1)               --------->TOE2(3)     ---------->ID1  <---------RAP2.6(3)        ---------->ID1-------   agttatattctctgaaaccctaacgttagaactgtttttgtctcctcaccgcagccgatattcacagcggtcgaacttatttgtcctccttaacgcagct  9926800                                                                <---------ANAC58 ------->ARR14(2)       <---------MYB46(3)                      <---------ANAC46 --------ARR14(2)     <-------GAMYB                             <---------ANAC58                    < ---At4g35610    <---------GLK1(1)                             <-------TEIL                       --- -->ZAT2         --------->GLK1(1)                    --------->ALFIN1                           <--- ---ZAT2<---------YAB1<---------At4g35610             <-----------RAV1(1)   <---------YAB1       <--- ---RAV1(2)<---------MYB52(1)                         <---------ZAT6      --------->YAB1    --------- -->At4g35610  <------ZmHOX2a(1)                  <---------ZAT14  <---------DEAR3(1)      <---------LBD16   ggatttgatgaccattaggaattcagttgttctctatcgaagagctatcgtttgcagtgttgcgatgcgtctgcgattataaatgcgatagtactcggaa  9926900                                            ------------>CBF                                          ----------->HVH21                                        <---------DEAR3(2)                                       <---------DEAR3(1)                                       <---------At1g77200                                       <---------DEAR4(1)               <---------ARR11(3)      <---------DREB2C(2)   --------->ATHB12                    --------->ETT(1)                                    *TSS  --------->ICU4                  <-------GAMYB <---------ATHB12                  <---------ANAC55(2) ------------CBF   <---------YAB1--------->MYB55(2)                               --------->ANAC55(2) ------>ARR11(3)--------->GLK1(2)<---------MYB46(3)                           <---------ANAC58 ---MYB83      --------->ARR11(3)--------->MYB52(2)                           <---------ANAC58 ---MYB46(1) ----------->ARR10   <-----------RAV1(1)                         --------->At4g35610 >ANAC46    <------ZmHOX2a(1)  <---------MYB52(1)  ------->TEIL              <---------At4g35610   ggtattgattaagaggagattttgattcacttcgtttgttgtcggtgacaatgaatcgagggtatgtttcttctatgtgtgcttacttaattctatgaac  9927000                              <---------ANAC46                              <---------ANAC58     <----------DOF2     <---------WRKY38(1)      <----                              <---------ANAC58   <---------------AGL15 <---------WRKY12       <------ZmHOX2a(1)                         <---------ANAC58        --------------->AGL15 <---------WRKY45  ============                         <---------ANAC58   <----------DOF2           --------->WRKY18(1)<------ZmHOX2a(1)                      <----------DOF2      <---------ANAC58  --------->DAG2           --------->YAB1                  ------->GAMYB            <---------ANAC58 ---------->DOF2           <---------ICU4            <----------DOF2<---------MYB52(1)   <-----------GT1    <---------AtMYB61 --------->ICU4   tgttcttagggtttctttaacaccctttcgtttcttgaattaggggcttttctctttacagcaaaagttgtggtcaaagtttgagtaatgaggacaggat  9927100         ----------->HVH21       ----------->RAV1(2)       <---------ANAC46       <---------ANAC58     <---------ARR11(3)       <---------ANAC58     --------->ARR11(3)   <-------GAMYB   <---------ANAC58   <---------At4g35610      --------->ARR14(2)                          <---------ANAC58   --------->At4g35610      <---------ARR14(2)                   <---------YAB1  --------->MYB52(2)    <---------At4g35610          --------->DAG2     <---------ANAC46 --ZmHOX2a(2)      <---------ANAC58          ----------->RAV1(1) --------->ICU4 ==HOX2a_HOX2a <----------DOF2      <----------DOF2 ---------->DOF2     <---------ANAC58       <-----   cagtgagttgcctgaagctttgcttctgcagatattgtctttacttccaacaaaaaaagtagtagccatgagtgtcttgtctaaacgatggaggtctctt  9927200                                   --------->HSFC1(2)           <----------DOF2    <-----------RAV1(1)            <---------HSFC1(2)<-----------RAV1(2)    <---------REM1(1)        <---------WOX13(1)   --------->ETT(2)  XXXXXXXXXXXXXXXXXXXXX>MIR777   --------->ARR11(3)      --------->ATHB12  <---------ICU4    <---------ANAC58   <---------ARR11(3)     <---------YAB1 --------->LBD16 --------->ALFIN1     <-------TEIL -----DOF2                --------->ICU4 ------>ZmHOX2a(1)     <---------ANAC58                  ----   tggaagatgttgcctcggcttaagtttgatgattggatgtttcctgataatgtcaacaggtgtttgctttcacatcaagcttcgtttctacagagtttgc  9927300                                                                               --------->At4g35610                                                                               --------->ZAT2                                                                               <---------At4g35610                                                                          --------->ANAC46                                                                          <---------ANAC58                                                                          <---------ANAC55(2)                                                                  ------>NtERF2<---------ZAT2                                                                 --------->ANAC58                                                         <---------ANAC58 <---------ANAC58                                                         <---------ANAC46 --------->ANAC55(2)                                                         <---------ANAC58<-------TEIL               --------->ARR11(3)                    <---------GLK1(1) <---------ARR14(2)           <             <---------YAB1                          --------->GLK1(1) --------->ARR14(2)           <   <---------YAB1                             --------->ATHB12   --------->ANAC58           --------- --->TEIL<---------GLK1(2)               --------->ARR11(3)      --------->ANAC46           ---------   atcttgtaatagattatgattttgtgtctcatatgcatactgggatattgatgggaattgcgtttggacgccatatacgtgagctggtactctatgttaa  9927400                                       --------->TOE1(2)                                     <---------ARR14(2)                                     --------->ARR14(2)                              <---------ANAC58 <----------DOF2            <---------TOE2(3) ---------ANAC58        <----------DOF2<------------AtMYB77 ---------ANAC58       --------->TOE2(3)                              --------->YAB1                < >TOE2(3)    <----------DOF2<---------TOE1(3)                       <-----------HVH21              -- >YAB1       ------>ZmHOX2a(1)<---------ANAC58<---------ATHB12--------->ZAT6    <---------YAB1   <---   tggctttcaagagtcctttacatttcctttaagcttgtgtaactgcgaatcactagagacattgacactcggtcataacgttcttatagatgtcccttct  9927500  Previous    Next  AGI:  At3g26930.1    Description:  similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G55030.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74740.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101); contains InterPro domain FBD (InterPro:IPR013596); contains InterPro domain FBD-like (InterPro:IPR006566) Range:  from: 9926991    to: 9928630    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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