Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     ------>MYB46(1)                                                                   ------>MYB83                                                         ----------->RAV1(1)                                                       --------->LBD16                                                      --------->ANAC46                                                      --------->ANAC58                                                      <---------ANAC55(2)                                                      --------->ANAC58                         --------->YAB1               --------->ANAC55(2)                     ---------->DOF2                 <---------LBD16                  --------->YAB1                   <---------ARR14(2)            <---------ANAC55(2)                    --------->ARR14(2)            --------->ANAC55(2)                  --------->HSFB2a(1)            --------->ANAC46              XXXXXXXXXXXXXXXXXXXX>MIR172C/D       ------->TEIL            --------->ANAC58             XXXXXXXXXXXXXXXXXXXX>MIR172E      <---------TOE1(2)            --------->ANAC58             <---------ARR11(3)      <---------MYB59              -------           --------->ZAT18               --------->ARR11(3)     --------->ANAC46          <---------YAB1           <---------ZAT18               XXXXXXXXXXXXXXXXXXXX>MIR172A/B <---------ANAC46<-----------GT1   atcgaacaacgagtacgcaattacaaagcataaaccctactaaaatctcgacgattccgcaacaaaacccaacttcgtatgaacatcaaattacgataaa  9919600                                <---------ZAT2                               ------>NtERF2                               --------->LBD16                              --------->LBD16                              --------->ANAC46                             <---------LBD16                                                  -------                           ------>MYB83                                                       <------                      <-----------GT1                                                         -------                   <---------ZAT6                                                           ------->TEIL          <---------ANAC58 ------>MYB46(1)                        ----------->HVH21<-----------HVH21          <---------ANAC58 -------->P                     <---------REM1(1)        ------>ZmHOX2a(1) -->AHL20(2)  --------->MYB52(2)--------->ZAT2         <-----------RAV1(1)  <----------DOF2 -------->P   ttttcgaagttagcgtaagttgtgttaccttcccggctcgatcgagttcgtcgatttgtgttgtagccatgacatctcctttctccttcacatcaacctt  9919700                                                                                      <-----------GT1                                                                                    <---------HSFB2a(1)                                                                                    <---------HSFC1(2)                                                                                    --------->HSFC1(2)                                                                                    --------->HSFB2a(1)                                                                                <---------ANAC55(2)                                                                                --------->ANAC58                                                     <---------ICU4             --------->ANAC46                                                  --------->YAB1                --------->ANAC58                                          --------->YAB1                       <XXXXXXXXXXXXXXXXXXXXMIR779.2                                       <----------DOF2                        <-----------GT1                    ------>ZmHOX2a(1)--------->HSFC1(2)                    <---------ICU4 -->TOE2(3)        --------->TOE2(3) --------->HSFB2a(1)                --------->TOE2(3)        <--- ---DAG2 ----------->GT1        <XXXXXXXXXXXXXXXXXXXXMIR1886.2          --------->TOE1(3)    -------- -->TOE1(3)        --------->TOE1(3) <---------HSFC1(2)         <---------ATHB12--------->ANAC55(2)   atgtgaatgcgatgttaatctccttaacttctcaatcgaagctttcatcgtagaataatgcctcaaatcaaaaaccctaattacgaaatttccagtcaaa  9919800                         --------->KAN4(2)                        --------->HSFC1(2)                        <---------HSFB2a(1)                        --------->HSFB2a(1)         --------->CCA1(2)                    ===================================HOX2a_HOX2a                    ------>ZmHOX2a(2)              <---------ARR11(3)            <---------ANAC58                       --------->ARR11(3)            <---------ANAC58           --------->DAG2 ------GLK1(2)      ----------->GT1   ---------->DOF2           ----------->GT1                  ---- ->YAB1 ---------->DOF2 <---------HSFC1(2)      <------ZmHOX2a(1)                             -------   attctctgagaaaagcttgggatcgaaaattctcaaaaacaaaagtgagaggagatatagatgaaattgtgactaaaaacagagaatagaagagaagaaa  9919900                     --------->CCA1(2)                    --------->ARR14(2)               <-----------HVH21      <-------TEIL  <---------ARR14(2)     --------->GLK1(2)     --------->CCA1(2)     <---------WRKY12                        --------->DAG2 ----->DAG2    <-----------TGA1------->GAMYB       <------ZmHOX2a(1)      <----------DOF2     <------ZmHOX2a(2) --->DOF2   --------->ARR14(2)--------->ANAC46   <---------TOE2(3)---------->DOF2       --------->MYB52(1)   gagtgagattcaagtatcgtcagatatgttcaacgacattgaagaaagaataaggaagaccaaaaaaaaaaagtttctttggtcaaaaaaaaacagatcg  9920000                                                                                                    <                                                                                                  ---                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                      <-----------TBP            ----                                                                  --------->ANAC55(2)           -----                                  ------->GAMYB                <---------MYB52(1)               <----                      <---------ARR14(2)        =============HOX2a_HOX2a                        -----                      --------->ARR14(2)        <------ZmHOX2a(1) <---------ANAC55(2)           -----                     *TSS  --------->LBD16 <---------MYB52(2) =======================================                   --------->ANAC58      --------->MYB52(1)   <----------DOF2                   -----                   <---------ANAC55(2) --------->MYB46(3)    <---------ANAC46         ----------->GT1                   --------->ANAC46    <---------MYB52(2)  ==========================================                   --------->ANAC55(2)--------->ANAC58     ------->GAMYB            --------->CCA1(2)                   --------->ANAC58   --------->ANAC58  --------->MYB52(1)          --------->At4g35610                   --------->ANAC55(1)--------->ANAC46------>ZmHOX2a(2) <---------AHL20(2)      =====           --------->CCA1(2)   --------->MYB52(1)     --------->MYB46(3)--------->AHL20(2)      <----   aagaaacagagagagacggagacggaacccagataacagcaagcaacgaaggatgatccaacggcgttaagtatttatatgaagagagatgaaaatacac  9920100       --------->YAB1 ------NtERF2 ------>ALFIN1 --->MYC4 ---->ABF1 ----PIF5 ----MYC3 ----MYC4                                                                --------->ATHB12 --->MYC2                                                                --------->ATHB51 --->PIF5                                                                <---------ICU4 ----MYC2                                                               <---------YAB1 --->MYC3                                                               --------->ICU4 ---->O2                                                              <--------HAHB4         -------- -----O2  --------->MYB52(1)    ---------->DOF2                       <---------ICU4   --------->ANAC46 ---->TGA1a                ----------->GT1                           <---------YAB1   -------->ZAP1 ---->ANAC55(2)        <------ZmHOX2a(1)                           --------->YAB1     --------->MYB46(3) =====bZIP_DOF       --------->ANAC58          ----------->HVH21  --------->ICU4     <---------At5g28300 ---->ANAC46         <---------TOE2(3)     <---------WOX13(1)     <---------YAB1   --------->WRKY38(1) =====MYC_MYB        --------->ANAC58    --------->ATHB12    ----------->GT1       ----------->HVH21< ==========================================bZIP_DOF        ---------->DOF2         --------->WRKY12-- -----TGA1a      --------->YAB1 <<<<<<<<<<<<WRKY18     ---------->DOF2--------->YAB1<---------WRKY18(1)   gtggcgaaatcgtaacggatgataaggaagagtcaaaagtcaaagattgatgacagggaaagaaagtgattatcattatttgggtttgaccgccagtggg  9920200                                                                                                    -                                                                                                  <--                                                                                                  ---                                                                                              <------                                                                                              -------                                                                                          <---------AHL20(2)                                     --------->AHL20(2)                                  --------->AHL20(2)       <---------ARR11(3)            <---------AHL20(2)                               <---------CCA1(1)       --------->ARR11(3)           <---------YAB1                                    <---------RVE1(1) --------->WRKY18(1)           ----------->GT1                                       <---------ARR11(3) ->ALFIN1                      --------->ANAC58                          --------->AHL20(2)   <------ -----------HVH21<----------DOF2 <---------ARR11(3)    --------->YAB1    <---------AHL20(2)   ------- --------->GT1   <---------DAG2--------->ANAC58<----------DOF2---------->DOF2        --------->ARR11(3)   agggtcaaacatctcttcccttttttttttgacaagttattaattgtttcttttgaatcaaaacaaaagttgtatttaattgcattagatatttaatatc  9920300                                      --------->ANAC58                                      ----------->GT1                                      --------->ANAC58          ---------->DOF2          --------->WRKY18(1)         --------->AHL20(2)      <---------MYB46(3)         <---------AHL20(2)      <------MYB46(1)     <---------AHL20(2)          <------MYB83 -------->LBD16                <---------MYB52(1) -------LBD16                 <-------GAMYB -------->RAV1(2)            <---------MYB46(3) ---ARR11(3)                 --------->MYB55(2)                                                 <---- -->ARR14(2)                 --------->MYB52(2)                    --------->ARR11(3)           <---- ---ARR14(2)               <---------MYB52(1)                      <---------ARR11(3)     <---------YAB1 -->ARR11(3)          --------->GLK1(2)         <---------TOE1(3) <<<<<<<<<RAP2.2      <---------YAB1   ccctgagttaattaaagtccaaataatctgttcgttggtcaagaaaatttaagcttcaaatctattttagatattaatatcaaactagtatgtttattgc  9920400                         --------->YAB1                 <---------ALFIN1   ----------->GT1                --------->ZAT14   <---------ANAC46          ------>ZmHOX2a(1)    <---------TOE1(3) <----------DOF2              ------->TEIL -----ANAC58--------->ARR14(2)  <------MYB46(1)  --------->YAB1--------->YAB1                       < -----ANAC58<-----------ARR10   <------MYB83    <---------ATHB12     <----------DOF2            <----   tagtttaagcttcaaatctacactctttaatatttggtttgtaatatgcaatgaacatgttcctataacaactttgtttacatctatagtacattcttct  9920500  Previous    Next  AGI:  At3g26910.1    Description:  hydroxyproline-rich glycoprotein family protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G41100.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G41100.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO49064.1) Range:  from: 9916348    to: 9920021    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version