Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  <-----------GT1                                           --------->YAB1                                          <---------YAB1                     --------->ARR11(3)                                         <-----------GT1                     <---------ARR11(3)                                        --------->YAB1                      <---------CCA1(2)                                       --------->ICU4                     <---------AHL20(2) ---->AHL20(2)                         <---------YAB1              <---------AHL20(2)            <--- ---ARR11(3)                      ----------->GT1      <---------YAB1     --------->AHL20(2)     <--- -->ARR11(3)   --------->ANAC46  <---------TOE2(3)--------->ZAT6----------->GT1                  <---   ttatacataaatgatatactcaacacaatacaaataatgttattatcattttacactctcattgaatattaaaaatttaaatcttcttacattcaaatag  9902700                                                         <---------ALFIN1                                                       <-----------GT1                  ------>ZmHOX2a(2)    <---------TOE2(3)   --------->YAB1             --------->WOX13(1)                  <xxxxxxxxxxxxx    <---------TOE1(3)--------->WOX13(1)           <---------WRKY12                    --------->ARR11(3)   <---------DOF5.7(2) <---------ATHB12          --------->WRKY18(1)         <----------DOF2 ------ANAC58  <---------AHL20(1)               <-----------HVH21        <---------CCA1(2)          < ------ANAC46  --------->ARR11(3)              ----------->GT1        <----------DOF2 <---------ARR11(3) ------ANAC58  <---------ARR11(3)           --------->MYB52(1)      <---------At4g35610<------ZmHOX2a(2)   cttgttaacgtttttaatatatccaatcatattttttatgcataaaaaccggtcaattaacacctctctcagcttttatctttagatagatcccatcttc  9902800                            ----------->RAV1(2)                            --------->At4g35610                            <---------At4g35610                                  --------->MYB59                     ------>NtERF2                                           --------->YAB1                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                   <--------HAHB4                 --------->ANAC58                                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                 --------->ANAC58                                           <---------YAB1                 --------->ANAC46                                           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                --------->SPL7                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)               <---------ALFIN1                <---------AHL20(2)           <---------AHL20(2)     <-       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)    --------->AHL20(2)         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)    ----------->GT1            <---------ANAC46            <xx xxxxxxxxxsmallRNA(se3)    <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   <---------YAB1<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)     ---------->DOF2 ---------->DOF2 <-----------------AGL3  xxxx   tcttgctctccaatcccatacgcctccatcatctgaagcactgtaaagtttaaatgctgtaaagttttgatggtgtctataattaggcccttgtctcaag  9902900                                        <--------ATHB1                                        -------->HAHB4                                        --------->ATHB12                                       <---------ATHB51                                       <---------YAB1                                       --------->ICU4                                       <---------AHL20(2)                                      --------->AHL20(2)                             <------MYB83                             <------MYB46(1)                            <---------------AtSPL8                            --------------->AtSPL8                           ------->TEIL                         <-----------RAV1(1)                           <---------AHL20(2)                        --------->ARR11(3)    ------->TEIL            <---------YAB1                      <---------ARR14(2)--------->ATHB51            <--------HAHB4                      --------->ARR14(2)<---------ICU4             <---------YAB1                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)              --------->ICU4              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)            ----------->GT1            <---------YAB1           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)               ------>ZmHOX2a(2)        --------->TGA2(2)   xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<---------AHL20(1)     <------ZmHOX2a(2)        <-----------TGA1 ------TEIL<xxxxxxxxxxxxxxxxsmallRNA(s)--------->AHL20(2)   --------->ARR14(2)       --------->bZIP60(1) xxxxxxxxxxxxxxxxxxxxsmallRNA(l2)    --------->YAB1         <---------MYB52(1)       <---------bZIP60(1) xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<---------MYB59           <---------ARR14(2)      <-----------STF1<   gtacacatgaaacgagtcgtagcaaatatgttggtaccaaaataattgaacctatgccctccgatcggtattattaatggacctataacgtcatctttgg  9903000                                                <---------YAB1                                                ------>ZmHOX2a(1)                          --------->ANAC58                                              --------->YAB1           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                             <---------ATHB12      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                            ------>MYB46(1)      <-------TEIL              --------->ANAC58                                            <---------ARR14(2)  --------->CCA1(2)        <---------ALFIN1                                            ------>MYB83      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      --------->ANAC58                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    ---------->DOF2                                     <-------GAMYB     xxxxxxxxxxxxxxxx>smallRNA(i) --------->ANAC58 -----------GT1                     --------->MYB52(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)--------->ANAC46   aataacatctcatccataagagttttttgtttttgagttcgttaccaatcctgattccagcgctagatacatggccaagtatgcaaaagctacacacaag  9903100                                                           <---------RVE1(1)                                                          <---------ARR11(3)                                             <---------ANAC46<----------DOF2                                             <------MYB83 --------->AGP1                                             <------MYB46(1)------>ZmHOX2a(2)                                            --------->MYB111(1)                                            --------->MYB111(2)   <---------ANAC58     --------->ZAT18                                            --------->MYB46(2)    <---------ANAC46     <---------ZAT18                                            <---------MYB46(3)    <---------ANAC58<---------ANAC58                                            --------->MYB59<------ZmHOX2a(2)      <---------ANAC46                                        <---------YAB1    <---------AGP1<<<<<<<<<<WRKY63 --------->At4g35610                             <---------AHL20(2)           --------->ARR11(3)      <---------ANAC58                     <-----------GT1<------------CBF    ----------->ARR10 <---------ANAC58          --------->ARR14(2)<---------AHL20(1)    <---------ARR11(3)   --------->WRKY38(1)          <---------ARR14(2)--------->AHL20(1) <--------P<---------CCA1(2)<---------ANAC58   --------   tagtattgagaggttttgcatttttacatatatatttggattgtgtttggtagatgtttagatctttttcgtgttgacttgttttcgtgtgtgctacatt  9903200                                                                                           ----------                                                                                           <---------MYB59                                                                                           --------->TOE2(3)                                                                                           --------->TOE1(3)                                                                                       <---------WRKY12             <---------ANAC58                                     ------>ZmHOX2a(2)    <---------WRKY38(1)         <----------DOF2                             ----------->GT1                   <---------WRKY45    ---------->DOF2         <---------YAB1  --------->YAB1    <---------ATHB12        --------->WRKY18(1)   <---------AHL20(2)      <---------AHL20(2)       <---------TOE1(3)        <---------AHL20(2) <-----------TBP           --------->AHL20(2)       <---------TOE2(3)       --------->AHL20(2)      < ->REM1(1)   <---------ANAC58            <------------CBF --------->MYB46(3)<---------AHL20(2)  -----   tgtatttaaagcttttcttgtttctctattaatataagtttgctattgatagttgaggtaacaaatgatcgaagactattaatttgtggtcaacctaaaa  9903300                              <------MYB46(1)                              <------MYB83                           <---------ANAC58                           <---------ANAC58         ------->TEIL                        <------------CBF                          --------->ZAT2          <---------ZAT18                 --------->ALFIN1                          <---------STY1(2)       --------->ZAT18            <---------HSFB2a(2)                          --------->STY1(2)      --------->ALFIN1            --------->HSFB2a(2) <---------ARR14(2)       <---------ZAT2       <---------ANAC46             ------>ZmHOX2a(2) --------->ARR14(2)  ------>MYB46(1)           <---------ANAC58            <------ZmHOX2a(2) ----->AGL15         ------>MYB83              <---------ANAC58           --------->ARR11(3)       <- ------ZmHOX2a(1)--------->MYB52(1)   <---------TOE1(3)                   --------->ARR14(2)       -- ----->DOF2  --------------->AtSPL8   <---------TOE2(3)                   <---------ARR14(2)      <--   aaggatttgaatttgtaagtaccagcctagcttggttttttaggtttttgagtggacctcgacatcaaactggagggatctggaatgtgggattgggacc  9903400              <-------GAMYB             <---------MYB46(3)             <------MYB46(1)             <------MYB83             --------->MYB55(2)            --------->ALFIN1            <---------AtMYB61          <---------ANAC58          <---------ANAC58          <---------ANAC46          <------MYB83          <------MYB46(1)         <------MYB83         <------MYB46(1)         --------->MYB55(2)         --------->MYB111(1)         <---------MYB46(3)                                         <-----------GT1       <--------P                                                 <-----------HVH21      <-------GAMYB                                              <---------bZIP60(1)     <---------MYB46(3)                                          --------->bZIP60(1)     --------->MYB55(2)                                          <---------TGA2(1)    <---------AtMYB61                                       --------->YAB1  <-----------RAV1(1)                                 --------->GLK1(2)     --------->HSFB2a(2) --------ARR14(2)        <-----------RAV1(2) <---------AHL20(2)  --------->TGA2(1) ------->ARR14(2)       <-------TEIL        <---------AHL20(2) <---------ICU4 -------MYB52(1)<---------MYB46(3)          --------->AHL20(2)--------->ICU4<---------HSFB2a(2)     <   gtttctgtggttgggtggttgtgaggtccagttgaacatctgataaataaatagaaattctgtcatgatgtcacatctctagaattagtcggataactta  9903500                                                                     <---------YAB1                                                                   <--------HAHB4                               ------>ZmHOX2a(1)                   --------->YAB1                               ===================================HOX2a_HOX2a                    ------>ZmHOX2a(2)                             <---------ATHB12            <------ZmHOX2a(2)                    ==================HOX2a_HOX2a                 <---------YAB1             <-------                   ===================HOX2a_HOX2a          <------ZmHOX2a(2)                 --------                   <------ZmHOX2a(2)                      <-----------HVH21                  --------                  --------->AGP1                          --------->ARR14(2)                 --------                  <---------AGP1                          <---------ARR14(2)     --------->At5g28300                  --------->ARR11(3)                  ------>ZmHOX2a(2)         --------->YAB1-------                  <---------ARR11(3)                --------->ARR14(2)--------->YAB1         <-------                  <---------ARR14(2)                <---------ARR14(2)<---------ICU4     ---------->DOF2                  --------->ARR14(2)  <---------MYB52(1)--------->LBD16         ----------->GT1     <---------TOE2(3)         ==============================HOX2a_HOX2a       <---------TOE2(3)    - ---------MYB46(3)<-----------ARR10  --------->TOE2(3)<---------LBD16--------->ICU4   --------->AHL20(2)   agttgttgatgttagaccaagatctatctaatcctagacccttaattcgatgttgatccggatcacctataattatcaactatggtaaataaaaagatcc  9903600  Previous    Next  AGI:  At3g26860.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G27331.1); contains InterPro domain Plant self-incompatibility S1 (InterPro:IPR010264) Range:  from: 9902753    to: 9903121    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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