Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         --------->LBD16                       ------>NtERF2                      --------->LBD16                      <---------ANAC46             --------->ALFIN1      <---------ANAC58                        <---------ZAT14         <---------ANAC58          <---------ANAC58                        <---------ZAT18 ----------------AGL1<---------ANAC46                                      --------->ZAT14 --->NtERF2--------->ALFIN1   <---------ANAC58                         <---------WRKY12 ------ATERF1(1)     <---------LBD16                                 <-----------HVH21           ---- --->At4g35610    --------->ATERF1(1)                           <---------At4g35610    --------->YAB1 ----ZAT2<---------ANAC46   <------MYB46(1)                     --------->At4g35610    <---------AtLEC2 --->ZAT2<---------ANAC58 <--------P                            <---------ZAT2        <-------TEIL ----->RAV1(2)    <--------P<------MYB83                        --------->ZAT2       --------->AtLEC2 ----At4g35610   <-------GAMYB<---------ANAC58               <---------MYB52(1)   <---------REM1(2)   tgccccttgtggcctgtggggttgccgggttggcttagcttgagacgacccaatactgaatttgttagctcggtcagtgaagtctacatgcatgatacaa  9888800                                            ================================MADS_MADS                                            <---------------AGL15                                            --------------->AGL15                           <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                          <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                          <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                         <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                         <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                        <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                        <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                       <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                       <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                      <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)          <---------ZAT6<------------------------ANAC81                    <--------P               <  <---------WOX13(1)  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <---------------AGL15             <------ ------>DOF2    <---------TOE2(3)           --------->YAB1  --------------->AGL15  ---------->DOF2<XX   aaagattgactagtgtttaagttttttttttttttttttttttttttcataaatggtagtgtctcatattagaaatggtagtttgaaaagtattcagttt  9888900                                                                                   <----------DOF2                                                                                   --------------->AGL15                                                                               --------->ZAT18       <----------DOF2                                                         <---------ZAT14   <---------ZAT18                                                       --------->DAG2 ---------MYB46(3)                                                <----------DOF2  ================== ---MYB52(1)      <---------AHL20(2)<---------WOX13(1) ---------->DOF2  ---------->DOF2 XXXXXXXXXXXXXXXXXXXMIR833-3P ----------->GT1<---------MYB52(1)<-----------GT1 <---------ZAT18   gtttgttcactttggattatttgattttggttttgttaattgaatcagttttgtttgaaaagtattcacttttgaaaagtgttcactttaaaaagttttg  9889000                                                                            --------->ANAC58                                                                 <---------ICU4             --------------->AGL15                               <--------HAHB4        <---------ARR14(2)             <----------DOF2         --------->ZAT14             --------->YAB1    <---------LBD16         <---------ZAT18             --------->ZAT18            <---------YAB1     --------->At4g35610         --------->ZAT18      --------->HSFB2a(2)            <---------YAB1 --------->ANAC46         <---------ZAT14      <---------HSFB2a(2)     <---------ZAT18       --------->ANAC58   --------->DAG2          <----------DOF2            --------->ZAT18   <-----------GT1--------->ARR14(2)  ---------->DOF2 ---------->DOF2    <---------ZAT14 ---------->ID1<---------YAB1  <---------At4g35610 ============================MADS_MADS        <---------AtMYB61 --------->ICU4  ---------->DOF2   tttgaaaagtgttcactttgaaaagtattctttgagaagtgctcagttttggtttgtccacttacgattattattcacaagctacagcggatagtagtga  9889100                              <---------------AGL15                              --------------->AGL15                             ----------------->AGL1                             --------------->AGL15                             <-----------------AG                   --------->TOE1(3)                   ---------->DOF2---------->DOF2                <-----------GT1            <----------DOF2  <-----------------AGL1 <---------YAB1  --------->TOE2(3)        <---------YAB1    <-----------GT1           ----------->TBP --------->TOE2(2)    <---------ANAC46   <---------GLK1(2) --------->ICU4    <---------GLK1(2)         *TSS   ctagtgacttatgactttgaataaagaatttccctctaaaggaatgaatacattataaatagattattaacctaagcttgatagagaagacagaacaaaa  9889200                                                          ----------->RAV1(2)                                                   ------>ZmHOX2a(1)                                                   ====================HOX2a_HOX2a                                                ---------->ID1                                             ==========================HOX2a_HOX2a                                             ------>ZmHOX2a(1)--------->ARR11(3)          --------->TOE2(2)                             <------------------------ANAC81  <---------ARR11(3)          --------->TOE1(2)                            <---------DEAR3(2)--------->TOE2(1) ------>ZmHOX2a(2)        --------->HSFB2a(1)                           <---------DREB2C(2)--------->TOE1(1) --------->YAB1------->TEIL--------->TOE1(3)                 --------->ANAC58   ===================================HOX2a_HOX2a       <---------HSFB2a(1)                 --------->ANAC58   ------>ZmHOX2a(1)  -------->P         --------->HSFB2a(2)   aaaaacacaagaacagggcaaggaaaatgtcggttttcctctgtttcctcgtcctcttacccctgatcttaatcttcttgaacgttttgaaaccttcgaa  9889300                                                          <---------ZAT18                                   --------->At4g35610   <------ZmHOX2a(1)                        <---------HSFC1(2)              --------->ANAC58        --------->At5g28300                        --------->HSFB2a(1)             --------->ANAC58 --------->ARR14(2)              <---------TCP16(1) --------->ATHB12    ------->GAMYB       <---------ARR14(2)            --------->LBD16     <---------ATHB12    --------->ANAC46    <------ZmHOX2a(1)          <---------LBD16    ----------------->AGL1------>MYB46(1)   <---------LBD16         ------>ZmHOX2a(1)   <-----------------AGL1------>MYB83      --------->LBD16   <---------HSFC1(2)   --------->At4g35610      --------->AtMYB61  <---------TOE2(1)   --------->HSFC1(2)   <---------HSFB2a(1)      --------->DEAR3(1) <---------TOE1(1)   --------->At4g35610  --------->HSFC1(2)    --------->REM1(1) --------->REM1(1)<---------MYB52(1)   atataagcttcctccgggtccaaagaagcttcccatcatcggaaacttacaccaacgcaggacactacatccgaggaatcgccgtaatctcgccgaaatg  9889400                                      <---------MYB46(3)                                         <---                                     --------->ALFIN1                ===========================HOX2a_HOX2a                                    ------->PIF5                     <------ZmHOX2a(1)        <------                                    <-------PIF5                     ============================HOX2a_HOX2a                                    --------->LBD16            <---------At4g35610            <------                                  <---------LBD16              --------->ZAT2            <------ZmHOX2a(2)                                  <------NtERF2               ----------->RAV1(1)<---------ARR11(3)                             <---------ANAC58                 <xxxxxxxxxxxxxxxxsmallRNA(i)------>ZmHOX2a(2)                             <---------ANAC58         ---------->DOF2====================HOX2a_HOX2a          <---------ANAC46  <-------TEIL       ------>ZmHOX2a(2)  --------->At4g35610   <---------ARR11(3)          <---------ANAC58<---------GLK1(2)    =============================HOX2a_HOX2a --------->ARR11(3)          <---------ANAC58--------->ARR14(2)  <------ZmHOX2a(2)--------->At4g35610<------ZmHOX2a(2)       --------->ALFIN1   <---------ARR14(2)  ==============================HOX2a_HOX2a------->GAMYB  >>>>>>>>>>>>>>>>>LFY <---------ANAC55(2)   <---------ARR11(3)<---------ZAT2---------->DOF2  <------  <<<<<<<<<<<<<<<<<LFY --------->ANAC55(2)<------NtERF2     --------->At4g35610  --------->ARR11(3)<-   tatggaccagtggcgcttctccaatacggattcgtccccgtggtcgcgatctcttcgaaagaagcagcagaggaagtgctaaagatcaacgatcttgagt  9889500                     <------NtERF2                    <------NtERF2                    --------->LBD16                    <---------RAP2.6(3)                   --------->RAP2.6(2)                                             <---------ANAC46                  <---------LBD16                                                <---------ZAT18                  --------->SPL7                                                 --------->ZAT14                 ------>NtERF2                                                   <---------ZAT14                 <---------ATERF1(1)                                             --------->ZAT18                 --------->ATERF1(1)                                        <---------ANAC46                 <------NtERF2                                              <---------ANAC58                <---------SPL7                                              <---------O2                ------>NtERF2                                               <---------ANAC58                <---------ATERF1(1)                                         <---------bZIP60(2)               <---------ATERF1(2)                                          <---------TGA1a       ---               <---------RAP2.6(2)                                       ----------->TGA1    -------- ------ZAT14   <---------DEAR3(1)              ---------->DOF2           ----------->HVH21 <---------LBD16 ---ANAC58     --------->ATERF1(2)             =======================================bZIP_DOF   ---- ---ANAC58     <---------RAP2.3(2)<---------DAG2                    <---------MYB52(1)  <---------At4g35610 ---ANAC46    --------->ATERF1(1) <----------DOF2               ------>NtERF2   --------->ALFIN1 <--- --------REM1(1)<---------RAP2.3(1)   <-----------GT1  <---------LBD16<---------DEAR3(1)--------->At4g35610   gttgtagtcgaccagaggcggccggaatgagagcaactttttacaacttcaaagacatcgggatggcacccttcggtgacgagtggagtctgatgcggaa  9889600                                                                                  <---------GLK1(2)                                                                                --------->ANAC58      <---------MYB46(3)                                                 <---------ANAC46     <---------AtMYB61                                                   <---------ANAC58     --------->ALFIN1                                                    <---------ANAC58 ------>ARR11(3)            --------->DAG2                           <---------ANAC58 ->LBD16     <---------ARR11(3)                    --------->YAB1    <---------ANAC58 ----->At4g35610           ---------->DOF2        <---------YAB1   --------->ARR11(3) ------At4g35610     <---------ANAC46<---------ATHB12     <------ZmHOX2a(1)     --------->ANAC58   gctctcggtggtcgagctcttcagcgtgaaaaagcttcaatctttcaagtatatcatagaggaagagaataacttgtgtgtcaagaaactctctgagttt  9889700  Previous    Next  AGI:  At3g26830.1    Description:  PAD3 (PHYTOALEXIN DEFICIENT 3); oxygen binding. Identical to Cytochrome P450 71B15 (CYP71B15) [Arabidopsis Thaliana] (GB:Q9LW27;GB:Q541X4); similar to CYP71B28 (cytochrome P450, family 71, subfamily B, polypeptide 28), oxygen binding [Arabidopsis thaliana] (TAIR:AT1G13090.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42494.1); contains InterPro domain Cytochrome P450, E-class, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) Range:  from: 9889185    to: 9890942    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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