Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            <---------YAB1                                                                        --------->ATHB51                                                                        -------->ATHB1                                                                        -------->HAHB4                                                                        <--------HAHB4                                                                        <---------ICU4                                                                        --------->YAB1                                                                        <---------AHL20(2)                                                                       <---------YAB1                                                                       --------->ICU4                                                                       <---------ATHB51                                                                     --------->YAB1                                                                     <---------ICU4                                                                    <---------YAB1                                                                <---------WOX13(1)                                  --------->WOX13(1)          <---------ICU4<-----------GT1                          <-----------GT1                     --------->ATHB12                       --------->YAB1         <---------ANAC55(2) --------->YAB1                       <---------ICU4 <----------DOF2         <--------ATHB1--------->MYB52(1)     ----------->GT1  <---------AHL20(2) --------->YAB1       --------->ATHB51 ----P            --------->AHL20(2)  --------->TOE2(3)      <---------AHL20(2)------->GAMYB --TOE2(2)        <---------AHL20(2)<---------ATHB12         <---------ATHB51<---------TOE2(3)   <--- --TOE1(2)      <----------DOF2 <---------ATHB12 --------->AHL20(2) --------->ICU4               <---   aagtgaatggttaacattctttaaataataactaatcaatctttaatcacataaattagttgaataattgataattattaacgaactactacttaatgac  9868700                                                                        ---------->DOF2                                                                     --------->TOE2(3)                                                                <---------AHL20(2)                                                           --------->LBD16                                                          <---------ANAC55(2)                                                          --------->ANAC55(2)                                                          ----------->GT1                     -------                                                          <---------ANAC46                   --------                                                     <---------ICU4  --------->TOE1(3)       --------                                                    --------->ICU4<-----------GT1            <-------                                          <<<<<<<<<<<<<<<<<LFY  --------->AHL20(2)          <-------- -------DOF2                          --------->ANAC58    <---------ANAC58             --------->YAB1 ------DAG2 <-------TEIL              --------->ANAC58    <---------ANAC58          --------->WOX13(1)   tttatttctgcgagtacataaatctctcttactcgcccacaagacaacaatggcataattccgtaattaaaccataaaaccaaggtcaattacaaaatct  9868800                                                                                  <---------ANAC58                                                                                  <---------ANAC58                                                                                 <-------TEIL                                                                               <-------MYC3                                                          --------->bZIP60(2)  ------->MYC3       ----------->HVH21                      <---------ANAC58                 ------->MYC2 -->RVE1(1)                                   <---------ANAC46      --------->ATHB12--------->ANAC58 ->ARR11(3)                       <-----------GT1         --------->ANAC58     <-------MYC2       --- ->GLK1(2)                    <----------DOF2 <---------ANAC58     <---------ATHB12 --------->ANAC58 --ARR11(3)       --------->REM1(1) <-----------GT1       --------->ANAC58<------ZmHOX2a(1)     <---- -GLK1(2) --------->ZAT6<---------DAG2   <----------DOF2 <------NtERF2--------->ICU4--------->ANAC46   ctctcaagtctgacactactacatcaccttctcttttttctctctttggcgagaatggcctcgtaaccagtgattaggacacatgcatgccatttcccat  9868900          <-------TEIL         <------ZmHOX2a(2)         ================HOX2a_HOX2a                    --------->At4g35610         ===========================HOX2a_HOX2a      <------ZmHOX2a(2)        <---------ARR11(3)                          --------->ARR11(3)        <---------ARR14(2)                          <---------ARR11(3)        --------->AGP1                          <---------MYB52(1)   --------->MYB46(3)        --------->ARR14(2)                  ------>NtERF2          ------>MYB46(1)        --------->ARR11(3)                 --------->ANAC46        --------->MYB52(1)   --------->WRKY18(1)                     <---------ALFIN1        ------>MYB83                ------ ------->GAMYB               ===============================HOX2a_HOX2a     <-------TEIL     <------- ------>MYB52(1)             ------>ZmHOX2a(1) <-----------HVH21 --------->AtMYB61     --------->MYB46(3) -----ATHB12      ------>ZmHOX2a(1)       --------->MYB46(3)     <---------MYB59  <----------DOF2   caacggtcaagatccatctcctcttcttctccttcaaaccattccccaccgttagatcatctccaaacctaaccacggttcattctttaaccacggtttg  9869000                  --------->ATERF1(1)                 ------>NtERF2                <---------ZAT18              <------MYB83            --------->ALFIN1          <---------ZAT2        <-----------RAV1(2)    <---------WRKY12                                                               ---------->DOF2   --------->WRKY18(1)                                                    --------->ANAC58  <-----------HVH21                         <---------AHL20(2)            --------->ANAC58 --->MYB52(2) <------MYB46(1)           <----------DOF2      ---------->DOF2      *TSS --MYB52(1) <--------P          ------>ZmHOX2a(1)<-----------GT1        ---------->DOF2   tttcggtcagccaggtaggggcctctctgatgtccttcaagactttttatttttctccattaccaaagtcaccaagaagccagaagaaagagaatagaga  9869100                                                         ------>ZmHOX2a(2)                                                        <---------GLK1(1)                                                   <---------ANAC58                                                   <---------ANAC58                                                   --------->ANAC55(2)                                                   <---------ANAC46                                                   <---------ANAC55(2)                                                   <---------ANAC55(1)                                               <---------ANAC58                                               <---------ANAC58                                               <-------GAMYB                                     <---                                              <---------MYB46(3)                                 <---                                             <---------AtMYB61                                   ----                                           <----------DOF2                                    -------                                          <---------ANAC58            --------->WOX13(1)      <------                                          <---------ANAC58   ------>ZmHOX2a(1)             --------->YAB1                                      <----------DOF2   --------->GLK1(1)            <---------ICU4                      <----------DOF2<---------ANAC58  <---------ARR11(3)         --------->YAB1-----                 <<<<<<<<<TBF1       <---------ANAC58  --------->ARR11(3)         <---------ICU4<----             ---------->ID1      <----------DOF2  <-----------------------TaNAC69(2)<---------YAB1---   gagagagagagttttgttcttcttctttctggttcctttgctttgctttggttgcgtgatctcctctctcatcaatcttcttcatcatcattctcatcat  9869200                                                                                                   <-                                                                                                  XXX                                                                                           ==========                                                                                          ===========                                                                          <---------GLK1(2)------>ZmHOX2a(2) ------ICU4                            --------->ANAC58         <---------TOE2(3)         <------ZmHOX2a(2) -----HAHB4                     <---------ANAC58                <---------TOE1(3)        <---------AGP1 ----->ATHB12                   <---------ANAC58          <---------------AGL15          <---------ARR14(2) -->YAB1                      <-----------GT1             --------------->AGL15          --------->ARR11(3) ---ICU4                 <----------DOF2                 <-----------------AGL2          <---------ARR11(3) ---->ICU4         ---------->ID1      --------->ANAC46  ----------------->AGL3          --------->ARR14(2) -----YAB1   <---------AHL20(2)---------->ID1     ---------->DOF2       <---------YAB1   --------->AGP1 ------>TOE2(3)   <-----------GT1      --------->ANAC58  <-----------------AGL3<<<<<<<<<TBF1  <------   cattagcttcttgatttttttttccttctttttttcgtttcaagaaactaaacaaagtttctatttatggttttctgattcttcttctacagatctatta  9869300                     <---------DOF5.7(2)              <---------ICU4              --------->ATHB12              --------->YAB1             <---------ATHB12             <---------YAB1             <------ZmHOX2a(2)              <---------YAB1 <---------GLK1(2)  <---------WRKY38(1)   <---------ICU4 --------AHL20(2)   <---------WRKY12      --------->YAB1                                  --------->ATHB12 XXXXXXXXXXXXXXXXX>MIR870                <---------ATHB12                            --------->ARR11(3) ==============HOX2a_HOX2a               --------->ICU4                              <---------AHL20(1) ==============HOX2a_HOX2a        --------------------->WRI1             <---------AHL20(2)       <-- ---YAB1------>ZmHOX2a(1)        <----------DOF2              --------->GLK1(2)     <---------CCA1(2)   tttgattctccttcgatcattgtcaacgttttcttcttttgtaatcatcacagttttttttgagaatttgttcatttttttttctcatatattgattcga  9869400                                                                 ------>ZmHOX2a(2)                                                                <------ZmHOX2a(2)                                                               --------->ARR14(2)                                                               <---------AGP1                                                               <---------ARR14(2)                                                               <---------ARR11(3)                                                               --------->AGP1                                                         ------>ZmHOX2a(2)                              ------>ZmHOX2a(2)         <------ZmHOX2a(2)                             <------ZmHOX2a(2)         --------->ARR11(3)            ------->TEIL    <---------ARR11(3)         --------->AGP1                <-----------GT1           <---------CCA1(2)--------->ARR11(3)         <---------AGP1            --------->TOE2(3) <----------DOF2            <---------AGP1             <---------ARR11(3)  <-----------GT1 -------ARR11(3)            --------->AGP1   <-----------GT1   --------->ARR11(3)<----------DOF2   gttctttcttcttgaatcttgttcttcatagatctagtttttgttttttactctctagatctatagatctgttgaattcacttctttaatccatctctgt  9869500                                                                                          <---------At4g35610                                                       <---------HSFB2a(1)                --------->At4g35610                                        ------>ZmHOX2a(2)                               <-----------RAV1(2)                                       <------ZmHOX2a(2)                                -------------                                      --------->ARR14(3)                                <---------HSFB2a(2)                                      <---------AGP1   --------->HSFB2a(1)              <------------                                      --------->AGP1 <---------GLK1(2)                 --------------                                      <---------ARR14(3)                               <---------LBD16                                      <---------ARR14(2)                               --------------                                      --------->ARR11(3)                             <-----------GT1          ====================================HOX2a_HOX2a                        <---------AHL20(2)          ------>ZmHOX2a(1)           --------->ARR14(2)    <---------ANAC46     --------->ATHB51          =====================================HOX2a_HOX2a  <---------ANAC58     --------->AHL20(2)     <---------GLK1(1)                <---------ARR11(3)    <---------ANAC58     <---------ICU4   gttcttgagttcctatggtctaagtcaaactcaagttcaagatctgttgaatttggaatcttgctggtgaagttagagatgaattatttcccagatgaag  9869600  Previous    Next  AGI:  At3g26810.1    Description:  AFB2 (AUXIN SIGNALING F-BOX 2); auxin binding / ubiquitin-protein ligase. Identical to Protein AUXIN SIGNALING F-BOX 2 (AFB2) [Arabidopsis Thaliana] (GB:Q9LW29); similar to GRH1 (GRR1-LIKE PROTEIN 1), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT4G03190.1); similar to TIR1 (TRANSPORT INHIBITOR RESPONSE 1), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT3G62980.1); similar to AFB3 (AUXIN SIGNALING F-BOX 3), auxin binding / ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT1G12820.1); similar to hypothetical protein [Brassica rapa] (GB:ABQ50561.1); similar to hypothetical protein [Brassica rapa] (GB:ABQ50554.1); simila Range:  from: 9869082    to: 9871877    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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