Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        <------MYB46(1)                                                                      <---------MYB46(3)                                                                      <------MYB83                                                                      --------->MYB52(2)                                                                  <---------MYB46(3)                                                                 --------->ALFIN1                                                       ------>ZmHOX2a(2)                                                     <---------ARR11(3)                         --------->GLK1(1)           --------->ARR14(3)                         <---------GLK1(1)           <-----------ARR10----------->GT1                    --------->At4g35610              <---------AGP1<-------GAMYB                   --------->GLK1(2)                 <---------ARR14(2)                         -----                   --------->ARR14(2)                --------->ARR14(2)                         ----- --------->DOF2    <---------ARR14(2)                <---------ARR14(3)                --------->MYB46(3) ----ZAT6--------->MYB46(3)                        ----------->ARR10<--------P         <---------ATHB12 ----->GT1        --------->RVE1(1)           --------->At4g35610<---------AtMYB61    ------>MYB83--- ---TOE2(3)   ---------->DOF2          ----------->GT1<------ZmHOX2a(2)               ------>MYB46(1) ---TOE1(3)  --------->AtMYB61     <---------GLK1(2) --------->ARR11(3)<-------GAMYB --------->WOX13(1)   ttaaaaggaaaaccaccaaagtatctgaaatctggctgattctgtaacatctgaagatcttgtggatgtggttggttactactaaaccaatcaccttcaa  9835900                                                                                           ------>MYB46(1)                                                                              --------->DEAR3(1)                                                                              --------->AtMYB61                                                                             --------->MYB46(3)                                                  ------>MYB46(1)            <---------MYB55(2)                                                  ------>MYB83             --------->DEAR3(1)                                               --------->HSFB2a(1)         --------->AtMYB61                                               <---------HSFB2a(1)         <---------ALFIN1------>MYB83                                               --------->HSFC1(2)         --------->MYB46(3)       <-                                   <---------ANAC58  ------>ZmHOX2a(1)  --------->ANAC46 <---------MYB59 ---->ANAC58                       <---------ANAC58 --------------------->WRI1<---------ALFIN1  ----- ---->ANAC58        <---------HSFC1(2)         <---------HSFC1(2)       <---------ALFIN1 --------->AtMYB61 ------>YAB1        --------->HSFC1(2)        ------->TEIL        <----------DOF2     <-----------GT1   gcataggcttaaactgagaagaaccatcttcttgattccttccccatgaaccttcctcgttctcttccctttctccaccaccaccgtttaaccaaacccc  9836000                                                                        --------->GLK1(2)                                                                      <---------HSFC1(2)                                                                      --------->HSFB2a(1)                                                                      --------->HSFC1(2)                                                                   <------ZmHOX2a(1)                                                            <----------DOF2   ---------->DOF2                                                           --------------->AGL15                            ---------->DOF2                <---------------AGL15             <---------MYB52(1)                           ----------------->AGL1       <---------ARR11(3) --------ALFIN1     --------->MYB46(3)          ---------->DOF2   ----------->GT1      --------->ARR11(3) ---->ANAC46<-----------HVH21           <----------DOF2  ------->TEIL <---------HSFB2a(1) <----------DOF2   tccaccattgtttccgtcaagacccatcgccaaagttgacacctttaccccaaagtctgaacctttagaggaaaattctgcaaagttgagacctttaact  9836100                                                     <----------DOF2                              <--                                              --------->CCA1(2)                     ---------->DOF2                                             <---------ARR11(3)              ----------->GT1     ---- >>>>>>>>>CBP60g                         ---------->DOF2                    --------->DAG2 --------->ANAC58 >>>>>>>>>SARD1            ---------->DOF2   --------->ARR11(3)            ---------->DOF2 --------->ANAC58   gaaatttggaagcttgaagacaattctgcaaaagtttgaaaacaaaagatatatactttgaatattcagagacttggaaaagtaaaaaaagagaagcatt  9836200                                                                               <-------TEIL                                                                          <---------WOX13(1)               <---------GLK1(1)                    --------->CCA1(2)   --------->ATHB12 -------TOE2(3)--------->GLK1(1)           ---------->DOF2              --------->YAB1              - ------>DOF2 <------ZmHOX2a(1)      <---------GLK1(1)  <---------ZAT6  <---------YAB1        <-------   aaagtagaatcacgaggatttcatgaattgaagaagcgaaatctgaaaaggaagatagagatagagagagagaatgatagattcatttctcagagctttc  9836300                                                        <------------CBF        <---------O2                                     ------>NtERF2<----------DOF2               --------->O2                                    --------->RAP2.6(2)--------->ATHB12    --------->GLK1(1)       <-                                  ------>NtERF2  <---------ANAC58          <---------GLK1(1)       <-                                <---------RAP2.6(2)   <---------YAB1      <---------GLK1(2)    <-----         <----------DOF2 ------------>CBF        <---------ANAC58   --------->ANAC58          <------ -------->DAG2      <---------WOX13(1)       <------------CBF       --------->ANAC46          <------ ---DOF2 <---------DAG2 *TSS   --------->RAP2.6(3)<---------DAG2    --------->ANAC58      <----------DOF2   aaaaattgaaactttttttttgatggattcaatttcggccaccatgaaattgctttatcattgaacacataccccagatttctcgtgactctctttgctt  9836400             <---------CCA1(2)            ------->TEIL            <---------ARR14(2)            --------->ARR14(2)            <-----------ARR10       <---------At5g28300     --------->WRKY12     --------->WRKY38(1)                                            <---------TOE1(3)  <---------ANAC46                      <-----------GT1         <---------ANAC58 --------ANAC58               <-----------TGA1             <---------ICU4              <-------GAMYB --------ANAC58            <---------At5g28300        <----------DOF2<---------At4g35610 --------->bZIP60(1) -----DOF2  <---------ARR11(1)<-----------HVH21     --------->At4g35610   <---------CCA1(2) <-------- ---ANAC58 <---------CCA1(2) --------->ANAC46       <---------At4g35610 <---------CCA1(2)<---------bZIP60(1) ---ANAC58 <---------ARR14(1)--------->DEAR3(1) <-----------GT1 <---------ANAC58      <-----------RAV1(1)   tgcttcgtttaccgtatctctctctctctcaccgtcactatttctccatttttctgcttaattttggcttaagcttatctctctgtctctgttgtcactg  9836500                                               <---------ICU4                                              <---------YAB1                                            --------->YAB1                                           <---------YAB1                                         --------->YAB1                              <---------ARR14(2)                                        --------->ICU4                               --------->ARR14(2)                                        <---------YAB1                              <---------CCA1(2)                                      --------->YAB1                              --------->ANAC55(2)                                     <---------YAB1                               <---------ANAC58                                     --------->ICU4                        --------->AtLEC2                 >>>>>>>>>TAC1     <---------ICU4                          --------->ANAC58     <---------------AGL15         -------->HAHB4                          --------->ANAC46     <----------DOF2               --------->YAB1                 --------->YAB1  <---------ANAC58     --------------->AGL15        <---------ATHB12            --------->ICU4      <---------ANAC55(2)    <-----------------AGL3        --------->ICU4         ----------->GT1   --------->ANAC58  -------- ---GT1--------->AHL20(2)        <---------TOE2(3)   ---------->DOF2<---------YAB1>>>>>>>>CAMTA3-----   tctctgtctttatatagacagtgtttaagtaagttaatgatgatgatgataatttcaaagtgtaattagcatcattcatgcaacgcgtgtcttccatgca  9836600                                <---------ANAC55(2)                        -------->ATHB1                        <---------ICU4                        --------->ATHB12                        --------->ATHB51                        <---------AHL20(2)                        -------->HAHB4                       <---------YAB1                       <---------ATHB51                       <---------ATHB12                       --------->ICU4                     ------>MYB83                                       <---------AHL20(2)          <                     ------>MYB46(1)                                    --------->AHL20(2)      <----                   --------->TOE2(3)                                   --------->AHL20(2)       -----                   <---------MYB46(2)                                  <---------AHL20(2)       -----                   <---------MYB59 ------->TEIL<----------DOF2         --------->AHL20(1)       <----                  --------->ANAC55(2)       --------->ARR11(3)     <---------AHL20(2)           -----                  <---------ANAC55(2)       <---------ARR11(3)    <---------AHL20(2)            <----            <---------YAB1<---------YAB1---------->DOF2           --------->AHL20(2)        <-------- <----------DOF2<-----------GT1 --------->ANAC55(2)               <---------AHL20(1)   <---------YAB1 ->AtLEC2   --------->AHL20(2) --------------->AtSPL8       ----------->GT1 <---------AHL20(2) ------ -->TEIL    <---------AHL20(2) <---------------AtSPL8 ---------->DOF2  <---------AHL20(1)  --------->AHL20(2)   tttctttaactcatattattacctaattattgttatgtacttaaaagttctttttcaaaagatggtaataaaatttattttatattcttactattaaata  9836700                                                                             <---------DDF1                                          --------->YAB1                  ------>NtERF2                                          <---------ICU4                --------->RAP2.3(1)                                         --------->ICU4          <----------DOF2   <----------DOF2    <----------DOF2                    <---------ICU4    <---------ARR11(3) <---------ETT(2)  <------------------------ANAC81      --------->YAB1    --------->ARR11(3) --------->ETT(2) -----------GT1                       <---------AHL20(2) --------->ARR14(2)<------NtERF2   --------->HSFC1(2) -----AHL20(2)                        --------->ICU4     <---------ARR14(2)--------->ATERF1(1)      - ---->AHL20(2)                    <---------YAB1         <-----------ARR10<---------ATERF1(1)    ---- ---->AHL20(1)                  --------->AHL20(2)      --------->GLK1(1)--------->DEAR3(1)<---------HSFC1(2) -----AHL20(1)                  --------->YAB1      --------->ANAC58   --------->LBD16     <---------MYB46(3) ---->ARR11(3)              <---------AHL20(2)      --------->ANAC58 <---------LBD16       <---------HSFB2a(1) -----ARR11(3)              --------->AHL20(2) <---------REM1(1) <---------DAG2 <---------ARR11(3)  < -AHL20(2)          --------->AHL20(2)--------->AHL20(2)<---------GLK1(1)<---------DEAR3(1)--------->HSFB2a(1) --->AHL20(2)       <---------AHL20(2)<---------ATHB51  <---------CCA1(2)<---------ANAC46 <---------TOE1(2)   tatttccttttattttttgtatttttttaaaaaattataaataattatgttgtaacgcatatctcgactttaccggcgtcgacatcttttcgatggttcc  9836800  Previous    Next  AGI:  At3g26744.1    Description:  ICE1 (INDUCER OF CBF EXPRESSION 1); DNA binding / transcription factor. Identical to Transcription factor ICE1 (BHLH116) [Arabidopsis Thaliana] (GB:Q9LSE2;GB:Q2V3S3;GB:Q5PNR8); similar to basic helix-loop-helix (bHLH) family protein / F-box family protein [Arabidopsis thaliana] (TAIR:AT1G12860.1); similar to inducer of CBF expression 1 protein [Capsella bursa-pastoris] (GB:AAS79350.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 9833926    to: 9836324    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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