Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       <---------AHL20(2)       <---------ATHB51                                        --------->TOE2(3)----------->GT1       --------->ICU4                                <---------ICU4            --------->ALFIN1   --------->AHL20(2)                                <---------AHL20(2)        <------NtERF2 <---------TOE2(3)   <---------WRKY45               <---------YAB1        --------->DAG2   <---------At5g28300 -------DOF2 ------->TEIL             --------->ANAC58      --------->ANAC58 <---------ANAC58 -ANAC58-------->HAHB4      ----------->GT1       --------->YAB1        ---------->DOF2   <---------- -ANAC46<---------ICU4    ---------->DOF2<----------DOF2    --------->ANAC46 <---------ANAC46   <---- -ANAC58--------->YAB1---------->DOF2 --------->ANAC58      --------->ANAC58 <---------ANAC58--------   tttaagttaataatgaaacttagtcaaagaaagaaaaaaaacgcattttggataataaatgcaaaccacaaaataaaaggcgtggatataatttaccatg  9766200                     <---------LBD16                   --------->MYB46(3)                   ----------->HVH21               --------->ATERF1(1)               <------NtERF2              <---------ATERF1(1)              <---------RAP2.6(3)              --------->LBD16              ------>NtERF2              --------->ANAC58                                       --------->DEAR3(2)              --------->ANAC58                                    ----------->HVH21             --------->ATERF1(2)                                <---------TGA1a                ------             --------->RAP2.6(2)                                --------->bZIP60(1)           -------             <---------ATERF1(2)                       --------->ALFIN1                    <---------            --------->RAP2.6(3)                        <---------DEAR3(1)     --------->ARR11(3)            --------->ATERF1(1)              <------NtERF2 <---------At4g35610<---------ARR11(3) -GT1 --------->YAB1------->GAMYB         --------->At4g35610   ==================================bZIP_DOF -----ICU4  <---------LBD16               <---------At4g35610   <---------bZIP60(1)    ---------->DOF2 ->YAB1   --------->GLK1(2)      <---------LBD16       <---------AtMYB61    ----------->ARR10<------NtERF2   atgccgaatgagaagccggcaacgacggagttttcgacggagacagcggcaagagcgatggtgctgatgtgaccggcgaagacctgagtaatagcgccga  9766300                                                                                             <-------                                                                                             <-------                                                                                             --------                                       --------->ANAC58                                   <---------DEAR3(1)                                       --------->ANAC58                                 --------->MYB52(1)                                --------->ATERF1(1)                                    --------->DREB2C(2)                              --------->TCP15(1)                                       --------->At1g77200                              <---------PCF2                                           ----------->HVH21                              <---------PCF5                                           ------->GAMYB                              --------->TCP20                                          --------->MYB46(3)                              --------->ARR14(2)                                       --------->DEAR3(1)                              <---------ARR14(2)                                      --------->DEAR3(2)                             ----------->HVH21                                        --------->MYB46(3)                             <------NtERF2                                           --------->MYB52(1)                ----------->GT1 --------->DEAR3(2)                                   ------>NtERF2            --------->ANAC46 <---------SPL7                                        <---------ABI4(2)            --------->ANAC58 --------->ATERF1(1)                                   --------->MYB46(3) <---------ARR14(2)        <---------ANAC46                                      --------->ANAC46 --------->GLK1(2)         <---------ANAC58                                      --------->ANAC58 >NtERF2   <---------LBD16 <---------ANAC58                     <-------MYC3     --------->ANAC58 -->DEAR3(1)--------->ANAC58--------->LBD16       <---------DAG2------->MYC3--------->MYB52(1)<------ -ID1 <---------MYB46(3)  <---------LBD16         <----------DOF2    <---------GLK1(1)<------NtERF2 -   gagaatattggttcacggatgtgaaaatggcgggaccggccaagtaccatagctttttggtttccacgttgaattccctaacgaagccaccgacggtggt  9766400                                                     <------NtERF2                                                    --------->ZAT14                                                    <---------ZAT14                                                    --------->LBD16                                                    ------>NtERF2                                                   --------->RRTF1(2)                                                   --------->RRTF1(3)                                                  --------->RRTF1(1)                                                  --------->RAP2.3(1)                                                 ------>NtERF2                <---------LBD16                  --------->LBD16              <----------DOF2              <---------DEAR3(1)                --------->ANAC46           <---------ARR11(3)         <---------ARR11(3)             <---------HSFB2a(1)                --------->ARR11(3)         <---------ARR14(2)             --------->HSFB2a(1)       <---------ARR14(2)         --------->ARR14(2)             --------->KAN4(1)      <---------ANAC58     ====================================HOX2a_HOX2a<------NtERF2 --------->ARR14(2)     <------ZmHOX2a(1)                  <---------KAN4(1)      <---------ANAC58 --AtMYB61    ----------->HVH21         <---------HSFC1(2)    <---------HSFC1(2) --DEAR3(1)   --------->DEAR3(1)  <------ZmHOX2a(2)--------->RAP2.3(2)    <---------CCA1(2) ->ALFIN1--------->ARR11(3)      --------->ARR11(3)--------->DEAR3(1)  <---------MYB52(1) ---MYB46(3)  --------->ETT(2)   <---------ARR11(3)----------->RAV1(1)<-------GAMYB ----->ZmHOX2a(2)        ---------->DOF2--------->HSFC1(2)    --------->HSFC1(2)    <----------DOF2   gatcggaggaatatcgtcgacggataagaaaggaagatcagaacgttcttccgccgcagtgagaagcgtctccgttatatctttgtcttttgccatctta  9766500                                                      <------ZmHOX2a(2)                                                     <-----------ARR10                                                     <---------AGP1<---------ICU4                                                     <---------ARR14(2)                                                     --------->ARR14(3)                                                     <---------ARR14(3)                                                     <---------ARR11(3)                                                     --------->ARR14(2)                                                     --------->ARR11(3)                                                     --------->GLK1(2)                                                    *TSS          <---------YAB1                                                    <------ZmHOX2a(1)  --------->YAB1          ------                                           ------>MYB83------>ZmHOX2a(2)                  --------->AHL20(2)                                           ------>MYB46(1)        <---------ATHB12   <------ZmHOX2a(1)                                          --------->MYB52(1)    <-----------GT1    ----------->GT1                                         --------->TOE1(2)<---------TOE1(2)   --------->AHL20(2)                                      ========================HOX2a_HOX2a     <---------AHL20(2)      --------->CCA1(2)               =======================HOX2a_HOX2a      <-----------TBP ------- ---------->DOF2  ---------->DOF2     <------ZmHOX2a(1)=====================================HOX2a_HOX2a   agagaaagagatggagagattaaaggaggtcgaagactaaggaccaacgagtgaggatcttgggtttaatcattcatgaattatataggaaaaaaaatgt  9766600                 <------------CBF               --------->AHL20(2)               --------->AHL20(1)               <---------AHL20(2)       <---------PCF2      ----------->HVH21     --------->SPL7   --------->TOE2(2)                                                        ----------->GT1   --------->TOE1(2)                 <------ZmHOX2a(1)                 --------->AHL20(1)        <---  <---------ANAC58                  ----------->GT1                    --------->AHL20(2)      ------  <---------ANAC58                 <---------TOE1(3)                   <---------AHL20(1)      <-----  <---------ANAC55(1)        --------->ARR11(3)                        <---------AHL20(2)      ------  <---------ANAC55(2)        <---------ARR11(3)                    <---------AHL20(2)          ------  --------->ANAC55(2)       --------->YAB1                         --------->AHL20(2)         <------ --->TOE2(3)  --------->AHL20(2)   <---------TOE2(3)              --------->AHL20(2)         <------- ---->GT1 --------->AtMYB61<---------YAB1                  <---------MYB52(2)         <---------ETT(2)   taatacgtgcgaccaaaaaaattgtttttatgatattaaggaaaaaatagctaatatagcaactagcatttaataaaatggctaaatgtagacaaaatca  9766700                             <---------TOE2(3)       --------->WOX13(1)    <---------YAB1                         <---------AHL20(2) ------YAB1            --------->AHL20(1)                          <---------AHL20(2) --->ATHB12            <---------ARR11(3)                          --------->AHL20(2) ----ICU4         ----------->GT1                                 <---------YAB1 -->ATHB1        <---------YAB1                                 <--------HAHB4                 ------ --->YAB1        <---------TOE2(3)          ------->MYC3       <---------YAB1           <---------AHL20(2) ---YAB1  --------->YAB1  <---------AHL20(2)<-------MYC3     <---------ZAT6        --------->ICU4 --ARR11(3)   <---------ATHB51      --------->ARR14(2) <---------AtMYB61  --------->CCA1(2)   <------   ttgttgtattaatcaaattatggtatatattatggatggattcacatgtgttttgttttggtagtattattaaatgatatgtgtcagtattgaattttgg  9766800                              <---------------AGL15                              --------------->AGL15                          <---------GLK1(2)                         <------ZmHOX2a(1)                  --------->AHL20(2)      <---------ATHB12                  --------->YAB1         --------->ANAC58                 <---------YAB1          --------->ANAC58             --------->ATHB12                --------->AHL20(2)      --------->WOX13(1)           --------->ICU4                <---------AHL20(2)   --------->ANAC58     <---------AHL20(2) ----->GT1      --------->AHL20(1)   --------->ANAC58  <---------AHL20(1)            ----------->GT1 ---TOE2(3)    --------->YAB1----------------->AGL2    --------->AHL20(1)      <---------AHL20(2)   ttaaaactctagtcaaattataatataggattctattactagcaatcaattttctaatatttttttgggtattgatttgatttttttttgttaaaaactt  9766900                                                                                           <---------TOE2(3)                              --------->TOE2(3)                                          --------->AHL20(2)                              --------->YAB1                                             <---------AHL20(2)                              --------->TOE1(3)                                         <---------AHL20(2)                            <---------ARR11(3)                                          --------->AHL20(2)                            <-----------ARR10       --------->GLK1(2)                <---------AHL20(1)                            --------->ARR11(3)      --------->ARR11(3)               --------->AHL20(2)                         --------->AHL20(2)         <---------ARR14(2)               --------->AHL20(1)                  <---------ANAC58                  <---------ARR11(3)               <---------AHL20(2)                <---------ANAC46 <-----------GT1    --------->ARR14(2)              --------->AHL20(2)    --------->DAG2<---------ANAC46             ----------->GT1                ----------->GT1   ---------->DOF2<---------ANAC58           ---------->DOF2      <---------YAB1    <---------AHL20(2)   ttaaaaaaagtttttgttttgggtgaataaaatcttaaccattttgaaaaagaaaatctgatgctgtttttatagatgagaagaaaataaattaatgaaa  9767000                                                                                               ------                                                <---------AHL20(2)                             <-----                                               --------->AHL20(2)                             -------                                     <-------GAMYB                                         --------->AHL20(2)                                    ----------->GT1                                        <---------AHL20(2)                                    <---------MYB46(3)                                     <---------ICU4                                   <---------YAB1   --------->YAB1<---------DAG2           --------->ATHB51        <-------TEIL    ----------->HVH21      --------->YAB1     <----------DOF2         --------->ICU4   tttgaagacatacacttgtatttgaattgacatggtgatggttaatctattatatcaaaatacactaactttttagaggctgctatgtgttaattattta  9767100  Previous    Next  AGI:  At3g26590.1    Description:  MATE efflux family protein. similar to MATE efflux family protein [Arabidopsis thaliana] (TAIR:AT1G12950.1); similar to MATE efflux family protein [Arabidopsis thaliana] (TAIR:AT5G38030.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16105.1); contains InterPro domain Multi antimicrobial extrusion protein MatE; (InterPro:IPR002528) Range:  from: 9762937    to: 9766552    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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