Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               <-------                                             ------>ZmHOX2a(2)                               --------                                            <------ZmHOX2a(2)                         <-----------HVH21                                           <---------ARR14(2)                        <---------ANAC58                                           --------->AGP1                            <---------ANAC58                   <---------SPL7          --------->ARR14(3)                    ------>ZmHOX2a(2)                 --------------->AtSPL3    <---------ARR14(3)                   <------ZmHOX2a(2)                 <------ZmHOX2a(2)         <---------AGP1                      --------->AGP1<-------                <---------ARR11(3)         --------->ARR11(3)                  <---------ARR14(2)         <---------ARR14(2)                <---------ARR11(3)                  --------->ARR14(3)         --------->ARR14(2)                --------->ARR14(2)                  <---------ARR14(3)        ================HOX2a_HOX2a       <---------CCA1(2)                    --------->ARR11(3)        =================HOX2a_HOX2a     ----------->ARR10                     --------->ARR14(2) ---        <------ZmHOX2a(1)       ----------->ARR10 --------->At4g35610          <---------ARR11(3) <-- ------->At4g35610------>ZmHOX2a(2)  <-----------GT1                         ----------->ARR10 ------ ---At4g35610   --------->ARR11(3)  <-------TEIL  <---------At4g35610     <------NtERF2      --------   gagatgaagaggaaacgagatcgtactcttcgattagattcactagatcttcatcggaagtaattgaaacgagcgcgtcgagatcttccgtcggaagctg  9713500                                    ------>NtERF2                                    <------NtERF2                                    --------->LBD16                                   --------->RRTF1(2)                                   --------->RAP2.6(2)                                   --------->RAP2.3(2)                                   --------->DEAR3(1)                                  --------->ATERF1(1)                                  --------->RAP2.3(1)                                  --------->ORA47(2)                                 ------>NtERF2                                 <---------ATERF1(1)                                 --------->ABI4(1)                                --------->DEAR3(1)                                --------->ANAC46                                --------->RAP2.3(3)                                --------->RAP2.3(2)                               --------->DEAR4(2)                               --------->RRTF1(1)                               --------->RAP2.6(1)                               --------->RAP2.3(1)                               --------->ERF1                               --------->ATERF1(1)                               <------NtERF2                               --------->ORA47(2)                              <---------RRTF1(1)                              ------>NtERF2                              <---------ATERF1(1)                              <---------RAP2.3(1)                             --------->ANAC46                             --------->DEAR3(1)                             <---------DEAR3(1)                             <---------O2                             --------->O2                            <------NtERF2                           <---------ATERF1(1)                          --------->DEAR3(1)                          ----------->HVH21                          --------->RAP2.3(3)                                        <-----------RAV1(1)                          --------->At1g77200                                        --------->ALFIN1                         --------->DEAR3(2)                                         <-------MYC3                         --------->ORA47(2)                                         <-------MYC4                         --------->RAP2.3(1)                                        <-------MYC2                         --------->ERF1                                             ------->MYC3                         --------->ATERF1(1)                                        ------->MYC2                        --------->LBD16                                             ------->MYC4                     --------->ARR14(1)                                            <---------O2                     --------->CCA1(2)                                             <---------TGA1a                     <------ZmHOX2a(2)                                             --------->TGA1a                    --------->ARR14(2)                                             --------->O2                    <---------GLK1(2)                                              ==================                    <---------ARR14(2)                                             <---------ANAC55(2)           <---------TOE2(3)--------->SPL7                                         --------->ANAC55(2)           <---------ANAC46------>NtERF2                                         <---------ALFIN1           <---------TOE1(3)--------->ATERF1(1)                                --------->AtMYB61      ------>ZmHOX2a(2) ------>NtERF2<---------ALFIN1                          <---------ALFIN1     <------ZmHOX2a(2)  --------->At4g35610                                   --------->ANAC58    <---------ARR14(2)  <---------ATERF1(1)                                   --------->ANAC46    --------->ARR14(2)------>ZmHOX2a(2)                                      ----------->RAV1(1) --ZAT2 <---------MYB52(1)--------->DEAR4(1)  ------>NtERF2                  ------->TEIL ->At4g35610        <---------ARR11(3)        --------->LBD16               --------->ANAC46 --At4g35610 <-------GAMYB--------->DREB2C(2)--------->ANAC46             --------->ANAC58 ------>bZIP60(1)   --------->AGP1<------NtERF2                           --------->ANAC58 -------bZIP60(1)   --------->ARR11(3)      <---------LBD16       ----------->GT1<------------OsbHLH66 ----->HVH21 --------->At5g28300<---------DEAR3(1)         --------->DOF5.7(2)--------->ANAC58     <- ->ZAT2<-------GAMYB--------->ARR11(1)  <-----------ARR10--------->ANAC46 --------->ANAC46 <xxxxxxxxx   acatcggatcgttacggttatagatccgccgacgccgccgcacatctccgccatcttcgacgctaactctgttaaaacgcaccacacgtgtggccttaat  9713600                                                                              --------->LBD16                                                                            <---------LBD16                                                                           -------->P           --------->MYB52(1)                                             --------->MYB52(1)        --------->ANAC46                                         <---------ANAC58       --------->LBD16                                           ----------->GT1  <----------DOF2   <---------ANAC58                             <---------ANAC46                  <- ============bZIP_DOF <---------MYB52(1)                         <---------ANAC58                  -- ----------GT1      <---------ANAC58                      <------ZmHOX2a(2)--------->MYB52(1)      -- xxxxxxxxxxsmallRNA(i2)                               --------->YAB1    <---------MYB52(2)        <--   ttctctttccacaaaaccgatttcgtttttttttttgtgaaattcaaaattgacaatgagatcgagagcgtgaaactaaccggaaaatgagacggagcga  9713700                                                                        <------NtERF2                                                                       <---------RAP2.6(3)                                                                       ------>NtERF2                                                                      --------->RAP2.6(2)                                                                      <---------ATERF1(2)          --------->ANAC58                                            --------->ATERF1(2)          --------->ANAC58                                            --------->DEAR3(1)        <------ZmHOX2a(1)                                            <---------RAP2.6(2)            <    <---------ANAC46           --------->MYB52(1)              --------->ARR11(3)                   < <---------DEAR3(1)       <-------GAMYB             --------->MYB52(1)--------->ANAC46         <----- --------ARR14(2)     <---------ALFIN1   <---------At5g28300  <------ZmHOX2a(1)               <------ ------->ARR14(2)    --------->MYB46(3) <-----------GT1      <------MYB46(1)                 >>>>>>>> ------->MYB52(1) ----------->HVH21    <---------ZAT14     <--------P---------->ID1        <---------AHL20(2) ----ZmHOX2a(1) --------->ALFIN1  ------->GAMYB <------NtERF2<------MYB83                  <---------YAB1   ggaacggcgaggacgcgagtgtgaccaccgttgtaacggagtttaccgtcgggataacgaggtaggattttgccgccatagctacagagaaatttgattg  9713800                        <---------LBD16                      <---------ARR11(3)                      <---------ARR14(2)                      --------->ARR14(2)                                                            <                      <---------ARR11(1)                                                           <-                     <---------CCA1(2)                                                           ----                   --------------->AGL15                                       <---------MYB46(3)*TSS                   <---------------AGL15                                   <---------MYB46(3)    ----                  ----------------->AG                                     <------MYB83        ------                  <-----------------AGL3                                   <------MYB46(1)     ------                  ----------------->AGL3                                  <---------AtMYB61    <-----         <------NtERF2--------->ARR11(3)                                 <--------P            <----- ---------ANAC58  <-----------------AGL2                               <---------HSFB2a(1)--------->ANAC58 ---------ANAC58  ----------------->AGL1                          --------->HSFB2a(2)     --------->ANAC58 ----MYB46(3)   <-----------GT1                                   <---------HSFB2a(2)     --------->ANAC46 ---WOX13(1) <---------REM1(1)                                 --------->GLK1(2)    <---------ANAC46< >ARR2 <---------DEAR3(1)                               <------ZmHOX2a(1)============================   ttgagttcgtcggagatgtaaccatatctggagaagtgagagagagttgaagaaggaaggagaagaatctagaaggttggtttgttctgtgcaagccaag  9713900                                                                                                    <                                                                          ------>ZmHOX2a(2)         -     --------->MYB52(1)                                                 --------->ARR14(2)          - ---------ANAC46                                                        >>>>>>>>>ARR2               - ----------------------TaNAC69(2)                                       --------->ARR11(3)          - ------->TGA1                                                           <---------ARR14(2)          - ------->HVH21                                                          >>>>>>>>>ARR1              <- --->O2                                                                <------ZmHOX2a(1)          --- --->TGA1a                     <-------TEIL                           <------MYB83               <--- ----O2<---------ANAC46     <---------MYB46(3)                        <------MYB46(1)            <--- ----TGA1a      <---------ANAC58                                    <--------P                   ---- ---------bZIP60(2) <-----------TBP              ---------->DOF2<---------ANAC46      <------ZmHOX2a(1) ====MYC_MYB    <---------ANAC58      <------------CBF   <------------CBF ===================HOX2a_HOX2a   tgacgagtaacgtttagagcgtatttatagcggttcatggaattgagtaaacaaagagagattgtgaagggtaggatcgtcatttggaggaactattcag  9714000    --------->ANAC58    --------->ANAC58 ---------ANAC55(2)                                                               -------->HAHB4 -------->ANAC55(2)                         --------->TOE2(3)                     --------->YAB1 -------->ANAC46                            <----------DOF2                      <---------YAB1 -------->ANAC55(1)                <---------YAB1                        <---------TOE2(3) -------->ANAC58              <---------AHL20(2)               ---------->DOF2  <---------TOE2(3) -------->ANAC58              --------->AHL20(2)            --------->LBD16   <---------AHL20(2) ------TEIL                  <---------AHL20(2)   --------->YAB1   --------->ARR11(3) ------>CCA1(2)          <---------YAB1  <-----------GT1   --------->ANAC58  --------->AHL20(2) ------ARR14(2)     <---------ZAT6<---------AHL20(2)       --------->ANAC58--------->ARR11(3) ------GLK1(2)<---------------AtSPL3<---------AHL20(2)     --------->ANAC46<---------ARR11(3) ----->ARR14(2)  <-----------GT1<---------YAB1  <---------TOE2(3)  <---------ARR11(3)               -   atacgtaagctatagttttgtactgttcttatttatttttattttactttaatgaaaacacccgtaaaagataataagatttaatgataagttttttttt  9714100                                                                                   --------->ATHB12                                                                                  <---------AHL20(2)                                                                                  <---------YAB1                                                                                  --------->AHL20(2)                                                                      --------->AHL20(2)                                                                      <---------AHL20(2)                                                                     <---------AHL20(1)  <---------ANAC46                                                                     <---------AHL20(2)  <---------ANAC58                                                     <-----------RAV1(1)      --------->AHL20(2)           <---------AtLEC2          <---------AHL20(1)              --------->AHL20(2)  <---------ANAC58     <---------DAG2                  --------->AHL20(1)  <---------ZAT18      <---------AHL20(2)     <----------DOF2   <---------YAB1--------->AHL20(2)  --------->ZAT18  <---------AHL20(2)     <--- --------->DOF2<---------------AtSPL8<---------ARR11(3)  <---------ZAT14 <---------AHL20(2)  <-------   aaaaaagctttttgtatggagtactatgaatgaatactatatattagcattttttatggtgcacatttcaatttttttatttatataattggcgtatttc  9714200                                                 <---------ICU4                                                 --------->YAB1                                                <---------YAB1                                                --------->ICU4                                              <---------ICU4                                              --------->YAB1                                             --------->ICU4                             --------->YAB1  <---------YAB1                            <---------YAB1 --------->YAB1                          --------->YAB1   <---------ICU4                          <---------ICU4  --------->ICU4                       --------->YAB1     <---------YAB1      --------->GLK1(2)<---------ICU4   <---------ICU4      <-------TEIL      <---------ARR11(3) --------->ICU4 --------->YAB1     --------->CCA1(2)                   ------      --------->ARR11(3) <---------YAB1<---------YAB1     --------->ARR14(2)                  <------     --------->RVE1(1)--------->ICU4   --------->ICU4     <---------ARR14(2)                --------- -------DOF2          <---------YAB1<---------YAB1  --------->YAB1                       <---------AHL20(2) --CCA1(2)    <---------WOX13(1) <---------TOE2(3) <---------YAB1                       --------->AHL20(2)   tttttaaaaatctttgatagacttattattattataagattattattattattattataagatacactagaaacgagtttttctctgcaattttatgtat  9714300                                                                                                  <--                                                                                                  <--                                                                                             --------                                                                                             <-------                                                                <---------HSFB2a(1)          <-------                                                                --------->HSFB2a(1)         ---------                                                       ------>ZmHOX2a(1)                    -------->P                                                       --------->AtLEC2                     ---------                                           <---------DAG2      ------->TEIL               --------->MYB46(3)                                           <----------DOF2   ------->GAMYB               <---------At4g35610                                          <---------ANAC58  <---------MYB52(2)           --------->At4g35610 ->TEIL                         --------->DEAR3(1)--------->TOE2(1)                 <-------PIF5----- ---CCA1(2)           ------>ZmHOX2a(1)   <---------ANAC58  --------->MYB46(3)      ------->PIF5----- >ANAC55(2) <----------DOF2    --------->ATERF1(1)--------->TOE1(1)           <---------ALFIN1-------   ctcatgacaaatctctttctcgtcctaaattgagcctccctcttgctttacctcgtcctgcaacgaacctttctcttgctcaacctcgtgcagcaaccaa  9714400  Previous    Next  AGI:  At3g26510.1    Description:  octicosapeptide/Phox/Bem1p (PB1) domain-containing protein. similar to octicosapeptide/Phox/Bem1p (PB1) domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G70640.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN80873.1); contains InterPro domain Octicosapeptide/Phox/Bem1p (InterPro:IPR000270) Range:  from: 9712081    to: 9713897    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g26511.1    Description:  unknown protein Range:  from: 9714325    to: 9714423    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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