Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               <----------DOF2                            ------>ZmHOX2a(2)                               --------->GLK1(2)                          <---------ARR11(3)                ---------->DOF2<---------GLK1(2)            <---------DOF5.7(2)   <---------At4g35610     --------->HSFB2a(2)     --------->DAG2 ---------->GT1           --------->ARR11(3)              <---------HSFB2a(2)    ---------->DOF2 ------->AGL15       <---------ARR14(2)         ---------->DOF2        ------->GAMYB       --------->YAB1 ---------AGL1       --------->ARR14(2)   ---------->DOF2----------------->AG  <---------HSFB2a(2)   aatggtatataagtaaacgactggattcgatctttctgctcgtcaaaagttaaagcctttccaaaagtttcaacagagattctaaaagttgaatcagaag  9672200                   --------->GLK1(2)               --------->HSFC1(1)               <---------HSFB2a(2)                                         ---------->DOF2               --------->HSFB2a(2)                                     --------->ANAC58           <----------DOF2<--------P                                   --------->ANAC46         --------->HSFC1(2)                           --------->YAB1   --------->ANAC58         <---------HSFC1(2)                      <---------ARR11(3)  <---------ALFIN1         --------->HSFB2a(1)               <----------DOF2     <---------ARR11(3)         <---------HSFB2a(1)  <----------DOF2    --------->ARR11(3)<-----------HVH21       <---------   tgagaaatggaagctttcgagaatcagggtagctttgaatcgagtctttaagctcttcataacaagttccttcaccccaaagctcatacattcctttcac  9672300                                                                                            ------>NtERF2                                                                                            <<<<<<<<<                                                                                           --------->ANAC58                                                  --------->ANAC58                         --------->ANAC46                                     <---------At4g35610                                   --------->ANAC58                      <---------ANAC58            --------->ANAC58                     <--------P     --------------->AGL15           --------->At4g35610                      -----------------------  <---------YAB1      <---------ANAC58   ---------->DOF2              <---------MYB52(1) <---------ATERF1(1) -DOF2 <---------ANAC46            <-----------RAV1(2)            <---------ARR14(2)<---------TOE2(3)   caatatgcttcgtttagcaatgttacgagcgatttcttcagatgaaagttgaacgaaatggaatggagtatcgttatggtgattttcaggtagacgccat  9672400                                                  <---------ALFIN1                                                 <-----------------AGL1                                          ---------->DOF2   <----------DOF2                                       <---------At4g35610 <---------ANAC58      ----------->HVH21 <<<<<<<<LFY                 --------->LBD16     <-----------------AGL2      <---------ANAC58 >TaNAC69(2)   --------->ZAT14         --------->At4g35610 <---------ANAC58  <---------ANAC58   tggagagactcattctctgcaatctcttctccgaagagttcagctaaagcttccacttctggctttctgaagtctaatagcctgtgatagaagacacaca  9672500                                         --------->TOE1(3)                                  --------->ANAC58                                  --------->ANAC58                             --------->LBD16                             ----------->HVH21                            --------->LBD16                           <---------LBD16             ------->GAMYB <----------ID1                           ----------->RAV1(2)      ----------->RAV1(1)              *TSS  --------->MYB52(1)                      <----------DOF2    --------->TOE2(3)      ---------->DOF2     -----------------   gaaaccacatctctctctctctctctttcccctgaaacgaaaaccctaatttgacaacagaactgagaaagaagacgaagacggagaaggaagaaacgaa  9672600       ------>NtERF2      --------->DEAR3(1)     <------NtERF2     --------->RAP2.3(1)     --------->ATERF1(1)    ------>NtERF2<----------DOF2                           <---------AHL20(2)    <---------ATERF1(1)                          ---------->DOF2                                  <--    <---------RAP2.3(1)                         <---------ATHB12     <---------ALFIN1        <-------   <---------DEAR3(1)                       ------------>CBF      --------->PCF2            <-------- ------->ANAC81 <---------DAG2            <---------PCF2  --------->AHL20(2)       ----------->TGA1<-   gaacgacggcgactaaaaccttttcttcaaaacccttatacatgggcccaataaagcccatttattcaggcccacttgtacttaaatgacgaaattaccc  9672700          <---------ARR14(2)                            --------->At4g35610     <-----------HVH21            <---------ANAC58      <---------At4g35610  <---------At4g35610             <---------ANAC58    <---------ZAT14  --------->At4g35610         <---------MYB52(1)   <---------ANAC46                 ------>ZmHOX2a(1) --------->MYB52(2)        <------NtERF2           <---------ANAC58          <---------GLK1(2) ---------HVH21   --------->CCA1(2)            <---------ANAC58             --------->At4g35610 --At5g28300     --------->ARR11(3)            <---------ANAC46             <---------At4g35610 ---GT1   --------->ARR14(2)<---------ANAC46   <---------ANAC58             <---------ZAT2 --------MYB52(1)<---------ARR11(3)<----------DOF2 <---------ANAC58      <---------At4g35610       <-   cgttagctgtcgaatacgagatatatcgcgtcgtttgctttcacttgtgtcttgtgtgttctgccaaagtttctctgcagcttctcctcttctcagaaat  9672800                            --------->TOE1(1)                            --------->TOE2(1)                          ------>ZmHOX2a(2)                         --------->GLK1(1)                         <------ZmHOX2a(2)                 <---------ANAC58                                                                   <     --------->ANAC55(2)--------->ARR14(2)                                                   <-------     <---------ANAC58   <---------AGP1                  <---------ANAC46                     <-------     <---------ANAC55(1)<---------ARR14(2)           <---------CCA1(2)                       <-------     <---------ANAC58   --------->ARR11(3)    <---------GLK1(1)                          <---------ANAC58     <---------ANAC46   <---------ARR11(3)  <---------ICU4                          --------->ARR14(2)     <---------ANAC55(2)<---------ARR14(3)  --------->ATHB12                        <---------GLK1(2)  --------->ARR14(2)    --------->ARR14(3) --------->ICU4                     <---------HSFC1(2)    -  <---------ARR14(2)   <---------CCA1(2)   <---------YAB1      <----------DOF2--------->HSFC1(2)    - --------TOE2(3) <---------ANAC58          <---------ATHB12    --------------------->WRI1<---------ANAC58   tagggttccgtctcaaattacgagcagatctcgtactctctggtaatgatttctcgtttcttatactttgtttataccgaagtatcgattcgcttgcatg  9672900                                                                                  --------->REM1(2)                                                                               <---------ANAC58                                                                               <---------ANAC46                                                                               <---------ANAC58     <---------YAB1                                      <---------YAB1    <---------ANAC58 <-----------TGA1--------->GLK1(2)                     --------->YAB1      <---------ANAC58 ---------bZIP60(1)                                   --------->ICU4  <-----------RAV1(1) --AtLEC2       <---------ARR14(2)                --------->LBD16   --------->CCA1(2) --ANAC58       <---------GLK1(2)                --------->ANAC58  <---------ARR14(2)               < --ANAC58  <-----------GT1                       --------->ANAC58  --------->ARR14(2)    <------ZmHOX2a(2) -------->bZIP60(1)                              --------->ANAC46  --------->ARR11(3)   <---------ARR11(3) -------->bZIP60(2) <---------YAB1              <---------LBD16    <---------ARR11(3)   --------->ARR11(3)   tctcgtcatctttgtaccgattctgatttgaagtttctagggtttaccatcgcgcaattacgatttgtagatatgttgtttgcgagtagagatcaattga  9673000                                                                                     --------->At4g35610                                                                         <---------AHL20(2)                                                                         -------->ATHB1             <                                                                         --------->ATHB51           -                                                                        <---------YAB1             <-                                                                     ------------>ATHB5       -------                                                                 --------->ANAC58    <---------At4g35610                                                            <---------ANAC58  =======================                                                            <---------ANAC58  <-----------RAV1(1) ---                                                        --------->GLK1(1)-------->HAHB4       <------           --------->ARR14(2)                          --------->ARR14(2)<---------ICU4       -------           <---------ARR14(2)                          <---------ARR14(2)--------->ATHB12     <------      <---------ANAC46                                 <---------GLK1(2)--------->ICU4       <-------   --------->TOE2(3)                                 ----------->ARR10  <---------ATHB51 <---------ANAC46 -----------GT1    <---------ANAC55(2)      --------->CCA1(2)    --------->ANAC58<---------REM1(1)===   aattaccttcgtggatttgtctcgtaagcgcgaaccatgtttagagaaacgagttcagatttgcttcacgcttaattattgtgttgtagctgtgtatatc  9673100  Previous    Next  AGI:  At3g26410.1    Description:  methyltransferase/ nucleic acid binding. similar to unknown [Populus trichocarpa] (GB:ABK95153.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43446.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78018.1); contains InterPro domain tRNA guanosine-2' (InterPro:IPR016691); contains InterPro domain Putative RNA methylase (InterPro:IPR000241); contains InterPro domain N6 adenine-specific DNA methyltransferase, N12 class; (InterPro:IPR002296) Range:  from: 9670653    to: 9672585    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g26420.1    Description:  ATRZ-1A; RNA binding / nucleotide binding. similar to ATGRP7 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2), RNA binding [Arabidopsis thaliana] (TAIR:AT2G21660.2); similar to ATGRP7 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2), RNA binding / double-stranded DNA binding / single-stranded DNA binding [Arabidopsis thaliana] (TAIR:AT2G21660.1); similar to RNA-binding protein RZ-1 [Nicotiana sylvestris] (GB:BAA12064.1); contains InterPro domain Zinc finger, CCHC-type; (InterPro:IPR001878); contains InterPro domain RNA recognition motif, RNP-1; (InterPro:IPR000504); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677) Range:  from: 9672754    to: 9677242    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g26430.1    Description:  GDSL-motif lipase/hydrolase family protein. similar to ATFXG1 (ALPHA-FUCOSIDASE 1), alpha-L-fucosidase/ carboxylesterase [Arabidopsis thaliana] (TAIR:AT1G67830.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42511.1); contains InterPro domain Lipase, GDSL; (InterPro:IPR001087) Range:  from: 9672754    to: 9677164    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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